##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934919.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1457749 Sequences flagged as poor quality 0 Sequence length 51 %GC 37 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.67944687322715 34.0 31.0 34.0 31.0 34.0 2 32.82771656849019 34.0 31.0 34.0 31.0 34.0 3 32.87750977706038 34.0 31.0 34.0 31.0 34.0 4 36.24949494048701 37.0 37.0 37.0 35.0 37.0 5 36.153533976013705 37.0 37.0 37.0 35.0 37.0 6 36.14844599447505 37.0 36.0 37.0 35.0 37.0 7 36.30461211086408 37.0 37.0 37.0 35.0 37.0 8 36.319596171906134 37.0 37.0 37.0 35.0 37.0 9 38.10721736046466 39.0 39.0 39.0 37.0 39.0 10 37.728418266793526 39.0 38.0 39.0 35.0 39.0 11 37.57121150486126 39.0 37.0 39.0 35.0 39.0 12 37.51206826415247 39.0 37.0 39.0 35.0 39.0 13 37.50816567186806 39.0 37.0 39.0 35.0 39.0 14 38.8257621853968 40.0 38.0 41.0 35.0 41.0 15 38.858577162460755 40.0 38.0 41.0 35.0 41.0 16 38.91251374550763 40.0 38.0 41.0 35.0 41.0 17 38.88216146949852 40.0 38.0 41.0 35.0 41.0 18 38.365658285479874 39.0 38.0 41.0 35.0 41.0 19 37.86825303944644 38.0 37.0 41.0 35.0 41.0 20 37.30668242612411 38.0 35.0 41.0 34.0 41.0 21 37.26175836855316 38.0 35.0 41.0 34.0 41.0 22 37.08258349002469 38.0 35.0 41.0 34.0 41.0 23 36.99276555840546 38.0 35.0 40.0 34.0 41.0 24 36.82626638742335 37.0 35.0 40.0 33.0 41.0 25 36.70207491138735 37.0 35.0 40.0 33.0 41.0 26 36.830456409162345 38.0 35.0 40.0 34.0 41.0 27 36.860115836128166 38.0 35.0 40.0 34.0 41.0 28 36.79048793722376 38.0 35.0 40.0 33.0 41.0 29 36.65332029039293 38.0 35.0 40.0 33.0 41.0 30 36.34929127030785 38.0 35.0 40.0 33.0 41.0 31 35.822969523559955 38.0 35.0 40.0 31.0 41.0 32 35.06904823807116 38.0 35.0 41.0 23.0 41.0 33 34.11354149445481 38.0 34.0 41.0 17.0 41.0 34 33.2838170357174 38.0 33.0 41.0 12.0 41.0 35 32.78347507012524 38.0 33.0 41.0 10.0 41.0 36 32.54466852661192 38.0 32.0 41.0 8.0 41.0 37 32.3188827431883 37.0 31.0 41.0 8.0 41.0 38 32.19173259594073 37.0 31.0 41.0 8.0 41.0 39 32.15200970811848 37.0 31.0 41.0 8.0 41.0 40 32.0580580058707 37.0 30.0 41.0 8.0 41.0 41 31.92448700016258 37.0 30.0 40.0 7.0 41.0 42 31.784495135993918 37.0 29.0 40.0 7.0 41.0 43 31.68347980345039 37.0 29.0 40.0 7.0 41.0 44 31.58805391051546 37.0 28.0 40.0 7.0 41.0 45 31.5743313835235 37.0 27.0 40.0 7.0 41.0 46 31.532161572396895 36.0 27.0 40.0 7.0 41.0 47 31.51515315736797 36.0 27.0 40.0 7.0 41.0 48 31.453517718070806 36.0 27.0 40.0 7.0 41.0 49 31.3416445492331 36.0 27.0 40.0 7.0 41.0 50 31.26325999880638 36.0 27.0 40.0 7.0 41.0 51 30.738600403773216 35.0 25.0 40.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 4.0 9 14.0 10 14.0 11 12.0 12 20.0 13 31.0 14 29.0 15 55.0 16 115.0 17 220.0 18 470.0 19 834.0 20 1521.0 21 2435.0 22 3928.0 23 6725.0 24 13572.0 25 30013.0 26 55234.0 27 72853.0 28 68868.0 29 56501.0 30 45003.0 31 38557.0 32 35645.0 33 41902.0 34 78150.0 35 98397.0 36 92518.0 37 117836.0 38 233131.0 39 362909.0 40 232.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.807565637157012 15.596923750247813 18.454617358681087 37.14089325391408 2 49.76028109091482 18.464084008975483 19.36122062165709 12.4144142784526 3 23.070226767433898 18.125205368002312 46.752012863668575 12.052555000895214 4 20.93316476293244 19.215722322567192 46.580172581150805 13.270940333349568 5 19.422410853994755 21.568116321808485 45.14940500730921 13.860067816887545 6 19.990066877082405 24.834865261440754 43.63117381661726 11.543894044859575 7 59.83327719655441 4.211561798361721 32.60657355964573 3.3485874454381377 8 61.05570986500419 3.8558764231702436 31.76699143679742 3.321422275028143 9 56.41636523160023 5.924819704901187 33.173474994666435 4.485340068832151 10 30.014906544267912 23.17298794236868 37.84444372796688 8.967661785396526 11 22.41586171556283 17.464392018104625 46.6447927592473 13.474953507085239 12 20.37518118688471 16.162453206964987 49.17286858025627 14.289497025894033 13 18.154291308037255 17.718825394495212 49.67144549576093 14.455437801706603 14 15.044976878735639 20.21829546787547 48.793242183668106 15.94348546972078 15 15.354289387267631 19.123319583824102 51.61382377899076 13.90856724991751 16 17.66723901028229 18.467719751479848 49.08663974387909 14.778401494358768 17 16.726885081039327 18.575077053731473 48.06849464482569 16.629543220403512 18 17.569211160494707 18.893513217981972 48.386793611245835 15.15048201027749 19 17.818979810653275 20.241619099035567 47.083757217463365 14.855643872847796 20 19.39119834758933 20.146060810194346 47.44637108308769 13.01636975912863 21 18.577478015762658 20.1627303465823 47.38977697806687 13.870014659588174 22 16.81969941327348 19.015825083742126 47.88458095323681 16.27989454974759 23 16.44501213857804 19.09032350562408 48.13654476868103 16.32811958711685 24 18.053793897303308 17.61359465861407 48.492092946042156 15.84051849804047 25 15.950962751475048 19.380153922245874 47.05130993058476 17.61757339569432 26 14.94880119965783 20.547364463978365 48.11219215379328 16.391642182570525 27 15.547326734575021 20.44453469012841 48.156712849742995 15.851425725553575 28 14.042335134512182 21.198368169005775 48.36559654645621 16.39370015002583 29 16.733882170387357 19.510972053487947 47.533080111871115 16.222065664253584 30 18.320575078425712 19.658253924372442 46.77019157619041 15.250979421011438 31 18.29649685919867 21.17566192808227 44.643625205711 15.884216007008064 32 19.549661841647637 22.08823329667865 43.375780055414204 14.986324806259512 33 20.02573831297432 23.229513448474325 40.80208595581269 15.942662282738663 34 17.903287877405507 24.15779396864618 41.26670640830486 16.67221174564345 35 18.245596464137517 25.719448272645018 38.48275663368659 17.55219862953087 36 19.249678785579686 28.532895580789287 36.46341036762845 15.754015266002583 37 19.923182934785068 28.465462847170535 36.07129896847811 15.540055249566285 38 19.151993930367986 28.65836299664757 34.17975248139426 18.009890591590185 39 20.321811230877195 26.79507926261654 35.05905337612991 17.824056130376352 40 20.32846532564934 25.82111186493697 35.70477496468871 18.145647844724984 41 17.734877540646572 27.474551517442304 34.63483768467685 20.15573325723427 42 17.6548226066353 27.895405862051696 34.855726191546005 19.594045339766996 43 19.13944032889064 26.345138977972205 34.908890350807994 19.60653034232917 44 18.202241949745808 26.0373356455741 35.795325532722025 19.965096871958067 45 19.628070401694668 24.923495059849124 35.24337866120985 20.20505587724636 46 19.82213673272971 25.703533324324006 35.86611961318444 18.608210329761846 47 17.667993598349234 24.897427472081958 38.66001623050333 18.774562699065477 48 18.104831490194815 24.097632720036167 38.41779346101421 19.379742328754812 49 18.550107048607135 23.67547499603841 38.93297131399164 18.841446641362815 50 18.08315423299896 23.21840042421569 38.38109304139464 20.317352301390706 51 17.299686022765236 23.05582099524678 37.3007973251911 22.343695656796882 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 447.0 1 852.0 2 1257.0 3 64363.5 4 127470.0 5 86800.5 6 46131.0 7 42698.0 8 39265.0 9 37880.5 10 36496.0 11 34950.0 12 33404.0 13 31429.5 14 29455.0 15 26689.5 16 23924.0 17 21885.0 18 19846.0 19 18299.0 20 16752.0 21 14946.5 22 13141.0 23 13090.5 24 13040.0 25 13642.5 26 15625.0 27 17005.0 28 17633.5 29 18262.0 30 21014.5 31 23767.0 32 25111.0 33 26455.0 34 31133.0 35 35811.0 36 36598.0 37 37385.0 38 39381.5 39 41378.0 40 46666.5 41 51955.0 42 57961.5 43 63968.0 44 68661.0 45 73354.0 46 82105.5 47 90857.0 48 96710.5 49 102564.0 50 99916.5 51 97269.0 52 85944.0 53 74619.0 54 66495.5 55 58372.0 56 54564.0 57 50756.0 58 47955.0 59 45154.0 60 43567.5 61 41981.0 62 38776.0 63 35571.0 64 29024.5 65 22478.0 66 18147.5 67 13817.0 68 11018.0 69 8219.0 70 6465.5 71 4712.0 72 3837.5 73 2963.0 74 2373.5 75 1523.5 76 1263.0 77 880.0 78 497.0 79 453.0 80 409.0 81 304.0 82 199.0 83 110.0 84 21.0 85 17.5 86 14.0 87 11.5 88 9.0 89 7.0 90 5.0 91 3.5 92 2.0 93 1.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1457749.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.855598480946227 #Duplication Level Percentage of deduplicated Percentage of total 1 77.37685636085118 24.64886067949125 2 9.813243402453269 6.252134832486919 3 3.5924037868319547 3.4331451784424845 4 1.7686686194359738 2.2536798954640744 5 1.027432524455774 1.636473898266405 6 0.6551375521315633 1.2521879286295836 7 0.44459523553449776 0.9913993116810075 8 0.35867437186565937 0.9140629420446432 9 0.29049692460287746 0.8328558051089076 >10 3.794037645597844 30.095170458198673 >50 0.7898061086988706 16.043114347695695 >100 0.08140646161179821 4.998404970321083 >500 0.003949639597509693 0.9185422710506868 >1k 0.003071941909174206 1.6094935190025959 >5k 0.0 0.0 >10k+ 2.1942442208387183E-4 4.120473962116043 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 58949 4.043837450754554 No Hit CCTGTCTCTTATACACATCTGACGCTGAGGGAATCGTATGCCGTCTTCTGC 3778 0.2591667015377819 No Hit GCTGTCTCTTATACACATCTGACGCTGAGGGAATCGTATGCCGTCTTCTGC 3749 0.257177332997656 No Hit CTGTCTCTTATACACATCTGACGCTGAGGGAATCGTATGCCGTCTTCTGCT 1902 0.13047513666618876 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 1573 0.10790609357303622 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.057967455302662E-4 0.0 0.0 0.1385698086570459 0.0 2 2.057967455302662E-4 0.0 0.0 0.8382787434599509 0.0 3 2.057967455302662E-4 0.0 0.0 1.1706404874913308 0.0 4 2.057967455302662E-4 0.0 0.0 1.5069123696877857 0.0 5 2.057967455302662E-4 0.0 0.0 2.4557039654974897 0.0 6 2.057967455302662E-4 0.0 0.0 2.8991273532000363 0.0 7 2.057967455302662E-4 0.0 0.0 3.41238443655252 0.0 8 2.057967455302662E-4 0.0 0.0 4.159769617403271 0.0 9 2.057967455302662E-4 0.0 0.0 4.430803931266631 0.0 10 2.057967455302662E-4 0.0 0.0 5.137647153247919 0.0 11 2.057967455302662E-4 0.0 0.0 6.0638697059644695 0.0 12 2.7439566070702157E-4 0.0 0.0 6.935693318945854 0.0 13 2.7439566070702157E-4 0.0 0.0 7.229982665054135 0.0 14 2.7439566070702157E-4 0.0 0.0 7.345023045805553 0.0 15 2.7439566070702157E-4 0.0 0.0 7.57935694004935 0.0 16 2.7439566070702157E-4 0.0 0.0 8.048367723112827 0.0 17 2.7439566070702157E-4 0.0 0.0 8.680163731890744 0.0 18 2.7439566070702157E-4 0.0 0.0 9.371503599042084 0.0 19 2.7439566070702157E-4 0.0 0.0 9.833174298181648 0.0 20 3.42994575883777E-4 0.0 0.0 10.259036363598947 0.0 21 3.42994575883777E-4 0.0 0.0 10.724617200903586 0.0 22 3.42994575883777E-4 0.0 0.0 11.26407906985359 0.0 23 3.42994575883777E-4 0.0 0.0 11.783715852317512 0.0 24 3.42994575883777E-4 0.0 0.0 12.224944074734402 0.0 25 3.42994575883777E-4 0.0 0.0 12.603129894103855 0.0 26 3.42994575883777E-4 0.0 0.0 12.943654909041268 0.0 27 3.42994575883777E-4 0.0 0.0 13.286512287094691 0.0 28 3.42994575883777E-4 0.0 0.0 13.63458318270155 0.0 29 3.42994575883777E-4 0.0 0.0 13.998020235308 0.0 30 3.42994575883777E-4 0.0 0.0 14.407006967591814 0.0 31 3.42994575883777E-4 0.0 0.0 14.780185066153363 0.0 32 4.115934910605324E-4 0.0 0.0 15.16612256293779 0.0 33 4.115934910605324E-4 0.0 0.0 15.546777943253606 0.0 34 4.115934910605324E-4 0.0 0.0 15.922082608185635 0.0 35 4.801924062372878E-4 0.0 0.0 16.30609933534511 0.0 36 4.801924062372878E-4 0.0 0.0 16.69402620066966 0.0 37 4.801924062372878E-4 0.0 0.0 17.081953065994213 0.0 38 5.487913214140431E-4 0.0 0.0 17.489705017804848 0.0 39 5.487913214140431E-4 0.0 0.0 17.911588346141894 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTAGC 25 3.8913226E-5 45.0 24 TATCTCG 20 7.0339104E-4 45.0 41 GTAGACG 25 3.8913226E-5 45.0 1 ACTACGT 25 3.8913226E-5 45.0 18 CACAACG 20 7.0339104E-4 45.0 12 ACGAACT 20 7.0339104E-4 45.0 22 CGTTTTT 40045 0.0 44.35385 1 ACGTTAG 70 0.0 41.785713 1 ATCGCTA 60 3.6379788E-12 41.250004 19 TCAATCG 55 6.184564E-11 40.909092 16 TCGACGT 55 6.184564E-11 40.909092 26 CGACGGT 50 1.0822987E-9 40.5 28 GTTTTTT 44820 0.0 39.83936 2 GAATGCG 80 0.0 39.375 1 TGCGCGA 35 6.2494437E-6 38.571426 15 ACGGATA 35 6.2494437E-6 38.571426 20 TGCAACG 70 0.0 38.571426 1 TACGTAG 100 0.0 38.25 1 ACGTAGG 165 0.0 38.18182 2 TATTGCG 65 9.094947E-12 38.076927 1 >>END_MODULE