SRR2934918.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934918.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1395723
Sequences flagged as poor quality	0
Sequence length	51
%GC	37

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	53303	3.8190242619774843	No Hit
CCTGTCTCTTATACACATCTGACGCTAGGCAGATCGTATGCCGTCTTCTGC	2478	0.17754239200758318	Illumina Single End Adapter 1 (95% over 21bp)
GCTGTCTCTTATACACATCTGACGCTAGGCAGATCGTATGCCGTCTTCTGC	2128	0.15246578296696406	Illumina Single End Adapter 1 (95% over 21bp)
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA	1541	0.11040872723312577	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTATTG	25	3.891236E-5	45.000004	1
CACTCCG	25	3.891236E-5	45.000004	11
GTATACG	25	3.891236E-5	45.000004	1
ATTAGCG	40	6.8175723E-9	45.0	1
CAACGCG	20	7.033807E-4	45.0	1
ACGGCTA	20	7.033807E-4	45.0	34
TCGTAAG	20	7.033807E-4	45.0	1
CGTAATG	40	6.8175723E-9	45.0	1
CGTTTTT	39970	0.0	44.560917	1
ACGGGTC	90	0.0	40.000004	5
GTTTTTT	44840	0.0	39.90187	2
TAACGCG	40	3.4589357E-7	39.375	1
GTTACGG	70	0.0	38.57143	2
GTTAACG	35	6.249251E-6	38.57143	1
TCAACGG	35	6.249251E-6	38.57143	2
CGAATAT	135	0.0	38.333332	14
CTACGAA	130	0.0	38.07692	11
TACGGGT	90	0.0	37.500004	4
GTAAGCG	90	0.0	37.500004	1
TAAGCGG	180	0.0	37.500004	2