SRR2934915.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934915.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	752334
Sequences flagged as poor quality	0
Sequence length	51
%GC	38

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	28598	3.801237216449077	No Hit
CCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTTCTGC	2511	0.3337613347263317	No Hit
GCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTTCTGC	2046	0.27195368014738136	No Hit
CTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTTCTGCT	1327	0.17638442500272486	Illumina Single End Adapter 1 (95% over 21bp)
CGCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTTCTG	1160	0.15418683722920937	No Hit
TCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTTCTGC	933	0.12401406821970029	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGCCGTA	30	2.1644973E-6	45.000004	16
GGTCGAG	30	2.1644973E-6	45.000004	7
TATACGG	30	2.1644973E-6	45.000004	2
TGTGTCG	30	2.1644973E-6	45.000004	6
TCACGAC	20	7.031732E-4	45.0	25
TCGTTAG	25	3.8895167E-5	45.0	1
CGACGGT	20	7.031732E-4	45.0	28
CGGCCGT	20	7.031732E-4	45.0	15
GTTAGGC	20	7.031732E-4	45.0	14
TGAGTGC	25	3.8895167E-5	45.0	13
TTATCCG	20	7.031732E-4	45.0	31
ACGGCGT	20	7.031732E-4	45.0	31
CCATACG	20	7.031732E-4	45.0	27
AACGACT	20	7.031732E-4	45.0	32
CGGTCTA	20	7.031732E-4	45.0	31
GACGATG	20	7.031732E-4	45.0	1
CGCAATC	25	3.8895167E-5	45.0	20
ACTCACG	25	3.8895167E-5	45.0	1
TCGACAG	20	7.031732E-4	45.0	1
TGTCGAA	20	7.031732E-4	45.0	36