##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934915.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 752334 Sequences flagged as poor quality 0 Sequence length 51 %GC 38 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.612606900658484 34.0 31.0 34.0 31.0 34.0 2 32.77271663915229 34.0 31.0 34.0 31.0 34.0 3 32.81968646904168 34.0 31.0 34.0 31.0 34.0 4 36.208701188567844 37.0 37.0 37.0 35.0 37.0 5 36.09923916771009 37.0 35.0 37.0 35.0 37.0 6 36.08896314668751 37.0 36.0 37.0 35.0 37.0 7 36.23738126948935 37.0 37.0 37.0 35.0 37.0 8 36.237624512517044 37.0 37.0 37.0 35.0 37.0 9 38.02481078882518 39.0 39.0 39.0 35.0 39.0 10 37.64278232806174 39.0 38.0 39.0 35.0 39.0 11 37.52029550704873 39.0 37.0 39.0 35.0 39.0 12 37.424533518357535 39.0 37.0 39.0 35.0 39.0 13 37.35454997381482 39.0 37.0 39.0 34.0 39.0 14 38.62433041707539 40.0 38.0 41.0 34.0 41.0 15 38.70918501622949 40.0 38.0 41.0 35.0 41.0 16 38.800931501168364 40.0 38.0 41.0 35.0 41.0 17 38.83317781729923 40.0 38.0 41.0 35.0 41.0 18 38.32982957037699 39.0 38.0 41.0 35.0 41.0 19 37.823160989666825 38.0 37.0 41.0 35.0 41.0 20 37.25190407452009 38.0 35.0 41.0 34.0 41.0 21 37.16572027849333 38.0 35.0 40.0 34.0 41.0 22 36.97079621551067 38.0 35.0 40.0 34.0 41.0 23 36.886131691509355 37.0 35.0 40.0 34.0 41.0 24 36.67646284761821 37.0 35.0 40.0 33.0 41.0 25 36.51800530083713 37.0 35.0 40.0 33.0 41.0 26 36.60575621997677 37.0 35.0 40.0 33.0 41.0 27 36.65444071383189 37.0 35.0 40.0 33.0 41.0 28 36.59933752827866 37.0 35.0 40.0 33.0 41.0 29 36.458470572910436 37.0 35.0 40.0 33.0 41.0 30 36.134377816235876 37.0 35.0 40.0 32.0 41.0 31 35.602350817589 37.0 35.0 40.0 30.0 41.0 32 34.849364776814554 37.0 35.0 40.0 23.0 41.0 33 33.88417644290966 37.0 34.0 40.0 16.0 41.0 34 33.085023407156925 37.0 33.0 40.0 12.0 41.0 35 32.57632248442846 37.0 33.0 40.0 10.0 41.0 36 32.303857063485104 37.0 31.0 40.0 8.0 41.0 37 32.085719906318204 37.0 31.0 40.0 8.0 41.0 38 31.95612719882393 37.0 30.0 40.0 8.0 41.0 39 31.885621279910254 37.0 30.0 40.0 7.0 41.0 40 31.746797300135313 36.0 30.0 40.0 7.0 41.0 41 31.58707834552207 36.0 29.0 40.0 7.0 41.0 42 31.42597436776751 36.0 29.0 40.0 7.0 41.0 43 31.285116716777388 36.0 27.0 40.0 7.0 41.0 44 31.17694534608299 36.0 26.0 40.0 7.0 41.0 45 31.144530221949292 35.0 25.0 40.0 7.0 41.0 46 31.0989467443981 35.0 26.0 40.0 7.0 41.0 47 31.09067382306263 35.0 26.0 40.0 7.0 41.0 48 31.05007483378393 35.0 26.0 40.0 7.0 41.0 49 30.922466617220543 35.0 26.0 40.0 7.0 41.0 50 30.83062443010684 35.0 25.0 40.0 7.0 41.0 51 30.29080700858927 35.0 24.0 39.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 5.0 9 9.0 10 5.0 11 10.0 12 8.0 13 11.0 14 18.0 15 25.0 16 52.0 17 135.0 18 246.0 19 544.0 20 913.0 21 1357.0 22 2292.0 23 3989.0 24 7684.0 25 16882.0 26 30819.0 27 39174.0 28 36128.0 29 28195.0 30 21662.0 31 18848.0 32 18695.0 33 22719.0 34 41164.0 35 58539.0 36 52706.0 37 67739.0 38 123044.0 39 158611.0 40 105.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.404493217108357 15.809600523171888 17.72749869074108 37.05840756897867 2 50.43757161048151 18.86489245468103 17.792230578439895 12.905305356397555 3 23.013980492706697 18.19417971273397 46.0621213450409 12.729718449518431 4 21.921912342124642 19.067462058075268 45.192560750943066 13.818064848857023 5 19.097103148335712 22.0162853200839 44.12561442125439 14.760997110325999 6 20.024882565456302 24.755095476211363 44.46269874816239 10.757323210169952 7 58.2943214051206 5.12564898037308 32.54432206971904 4.0357075447872885 8 58.27518097015422 4.662689709623651 32.66939949543687 4.392729824785268 9 53.81678881985926 6.298798140187737 34.442681043260045 5.441731996692958 10 30.59811200876207 19.023465641590036 39.32535283530985 11.053069514338047 11 24.3379934975689 18.33613793873466 43.40160088471344 13.924267678983004 12 22.04034378347915 16.562723471224217 46.96158886877371 14.435343876522927 13 17.723511100123083 20.059973362894674 48.36043565756699 13.856079879415258 14 13.70614647217858 22.95044488219328 47.31462355815369 16.028785087474446 15 13.515406720951068 19.14389087825354 52.61665696352949 14.724045437265895 16 14.73933120130155 18.550271554921085 50.4984488272496 16.211948416527765 17 15.55492640236916 18.3236434881316 46.50062339333328 19.62080671616596 18 15.954615901979704 18.915534855529593 48.17168970164847 16.95815954084223 19 18.001313246510193 19.449739078653895 46.218036138204575 16.330911536631337 20 19.80117873178668 19.600868763075972 45.41972049648162 15.178232008655728 21 17.345753348911522 20.3158437608828 46.639657386214104 15.69874550399158 22 15.72187352957596 19.968258778680745 45.217283812774646 19.09258387896865 23 16.00844837532266 20.218014871054613 46.08139469969455 17.692142053928176 24 16.631974628290095 18.582305199552327 47.66792408690821 17.11779608524937 25 15.412037738557608 19.68673488105017 46.9306185816406 17.97060879875162 26 14.56892816222582 22.70015711107035 46.11289666557673 16.618018061127103 27 15.825285046269343 21.85691461505129 46.439480337190666 15.8783200014887 28 13.798392735141574 21.326565062857718 48.53748468100604 16.337557520994665 29 15.98186443786935 20.435737318797237 46.70080044235672 16.881597800976696 30 16.80982116985275 21.54375583185128 44.6514447040809 16.99497829421507 31 17.262811464057187 22.369187089776617 42.57470751022817 17.793293935938028 32 19.10720504456797 22.827095412409914 41.23341494602131 16.8322845970008 33 18.933080254248775 24.5025480704049 38.86611531580388 17.698256359542437 34 17.413409469730198 24.220226654650727 38.86172896612409 19.504634909494985 35 19.06360738714454 24.964709823030727 36.03014086828457 19.941541921540168 36 19.665068972025722 27.10750810145494 35.146490787336475 18.080932139182863 37 19.756251877490584 26.784779100771733 36.201607264858424 17.25736175687926 38 20.008134684860714 27.01021089037582 34.171657800923526 18.809996623839943 39 20.995329202189453 25.79532494875946 34.01707220463251 19.19227364441857 40 20.970606140357873 25.059481560051783 34.61879962888823 19.351112670702108 41 17.882217206719357 26.967809510137787 33.166120366752 21.98385291639086 42 18.780488453266766 27.53245234164613 33.45761324092757 20.229445964159535 43 19.918148056581252 26.582475336752026 33.985968997812144 19.51340760885458 44 19.01030659255065 26.325807420640302 33.64742255434422 21.016463432464835 45 19.30153362735168 25.47166551026539 33.36124646765931 21.86555439472362 46 20.222932899483475 25.9124271932413 33.95047944131197 19.914160465963256 47 18.23525189609934 25.285445028404936 36.4883150302924 19.990988045203327 48 18.586558629544854 23.891516268040526 35.93736292657251 21.584562175842112 49 18.357538008384573 23.638835942546795 37.30178351636374 20.70184253270489 50 17.567064628210343 23.520537420879556 37.13869106008767 21.773706890822428 51 17.616111992811703 23.85921678403475 34.51179928063865 24.012871942514895 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 335.0 1 570.0 2 805.0 3 28559.0 4 56313.0 5 39418.0 6 22523.0 7 21525.5 8 20528.0 9 20004.0 10 19480.0 11 18897.0 12 18314.0 13 17097.5 14 15881.0 15 14448.5 16 13016.0 17 11868.5 18 10721.0 19 9807.0 20 8893.0 21 8116.0 22 7339.0 23 7048.5 24 6758.0 25 6925.0 26 7488.0 27 7884.0 28 8557.5 29 9231.0 30 9851.5 31 10472.0 32 10528.0 33 10584.0 34 11896.5 35 13209.0 36 14401.5 37 15594.0 38 16682.5 39 17771.0 40 21865.0 41 25959.0 42 29886.5 43 33814.0 44 37731.0 45 41648.0 46 46798.0 47 51948.0 48 55144.0 49 58340.0 50 57553.5 51 56767.0 52 48235.0 53 39703.0 54 34923.5 55 30144.0 56 27139.0 57 24134.0 58 22464.5 59 20795.0 60 20605.5 61 20416.0 62 18556.0 63 16696.0 64 14999.0 65 13302.0 66 11123.0 67 8944.0 68 7547.5 69 6151.0 70 5085.0 71 4019.0 72 3302.0 73 2585.0 74 2092.0 75 1386.0 76 1173.0 77 1044.0 78 915.0 79 632.0 80 349.0 81 229.0 82 109.0 83 62.5 84 16.0 85 34.5 86 53.0 87 30.5 88 8.0 89 5.5 90 3.0 91 2.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 752334.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.18286997734425 #Duplication Level Percentage of deduplicated Percentage of total 1 77.90015158032107 27.407509042658436 2 9.801907235885757 6.897184556203166 3 3.6809541298055297 3.8851959162454883 4 1.8201939332273684 2.5615858594515726 5 1.0211039116964482 1.796268307928687 6 0.6569730699256785 1.3868518858687102 7 0.47443854165562804 1.1684476666317545 8 0.3613121731321638 1.0169599366832487 9 0.2692454241212677 0.8525544073968119 >10 3.3134847091956563 29.733426807095746 >50 0.629827017433243 13.927082660844132 >100 0.06502184829745052 3.7295548530426075 >500 0.0034627019803376013 0.8127267471569329 >1k 0.0015389786579278228 0.9535055308083669 >5k 0.0 0.0 >10k+ 3.847446644819557E-4 3.871145821984338 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 28598 3.801237216449077 No Hit CCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTTCTGC 2511 0.3337613347263317 No Hit GCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTTCTGC 2046 0.27195368014738136 No Hit CTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTTCTGCT 1327 0.17638442500272486 Illumina Single End Adapter 1 (95% over 21bp) CGCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTTCTG 1160 0.15418683722920937 No Hit TCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTTCTGC 933 0.12401406821970029 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.987590617996794E-4 0.0 0.0 0.19020807247844707 0.0 2 3.987590617996794E-4 0.0 0.0 1.0828966921606626 0.0 3 3.987590617996794E-4 0.0 0.0 1.5776237681667982 0.0 4 3.987590617996794E-4 0.0 0.0 2.037791725483628 0.0 5 3.987590617996794E-4 0.0 0.0 3.273811897375368 0.0 6 3.987590617996794E-4 0.0 0.0 3.9204661759271815 0.0 7 3.987590617996794E-4 0.0 0.0 4.599818697546568 0.0 8 3.987590617996794E-4 0.0 0.0 5.6086791238997575 0.0 9 3.987590617996794E-4 0.0 0.0 6.007571105386703 0.0 10 3.987590617996794E-4 0.0 0.0 6.865301847317814 0.0 11 3.987590617996794E-4 0.0 0.0 8.13814077258239 0.0 12 3.987590617996794E-4 0.0 0.0 9.154710540797039 0.0 13 3.987590617996794E-4 0.0 0.0 9.536721722001133 0.0 14 3.987590617996794E-4 0.0 0.0 9.699947097964468 0.0 15 3.987590617996794E-4 0.0 0.0 10.014036318975348 0.0 16 3.987590617996794E-4 0.0 0.0 10.673185048130218 0.0 17 3.987590617996794E-4 0.0 0.0 11.457942881751988 0.0 18 3.987590617996794E-4 0.0 0.0 12.441681487211797 0.0 19 3.987590617996794E-4 0.0 0.0 12.94464958382846 0.0 20 3.987590617996794E-4 0.0 0.0 13.423293377675341 0.0 21 3.987590617996794E-4 0.0 0.0 14.04495875502104 0.0 22 3.987590617996794E-4 0.0 0.0 14.628742021495771 0.0 23 3.987590617996794E-4 0.0 0.0 15.222228425140962 0.0 24 3.987590617996794E-4 0.0 0.0 15.720544332703295 0.0 25 3.987590617996794E-4 0.0 0.0 16.137779231033026 0.0 26 3.987590617996794E-4 0.0 0.0 16.524708440665982 0.0 27 3.987590617996794E-4 0.0 0.0 16.89648480595055 0.0 28 3.987590617996794E-4 0.0 0.0 17.286072409328835 0.0 29 3.987590617996794E-4 0.0 0.0 17.704636504531233 0.0 30 3.987590617996794E-4 0.0 0.0 18.166532417782527 0.0 31 3.987590617996794E-4 0.0 0.0 18.60423694795131 0.0 32 5.316787490662392E-4 0.0 0.0 19.033966296884095 0.0 33 5.316787490662392E-4 0.0 0.0 19.42288930182605 0.0 34 5.316787490662392E-4 0.0 0.0 19.79692530179415 0.0 35 5.316787490662392E-4 0.0 0.0 20.221204943549008 0.0 36 5.316787490662392E-4 0.0 0.0 20.618767728163288 0.0 37 5.316787490662392E-4 0.0 0.0 21.018058468712034 0.0 38 5.316787490662392E-4 0.0 0.0 21.3914298702438 0.0 39 5.316787490662392E-4 0.0 0.0 21.763472074902904 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGCCGTA 30 2.1644973E-6 45.000004 16 GGTCGAG 30 2.1644973E-6 45.000004 7 TATACGG 30 2.1644973E-6 45.000004 2 TGTGTCG 30 2.1644973E-6 45.000004 6 TCACGAC 20 7.031732E-4 45.0 25 TCGTTAG 25 3.8895167E-5 45.0 1 CGACGGT 20 7.031732E-4 45.0 28 CGGCCGT 20 7.031732E-4 45.0 15 GTTAGGC 20 7.031732E-4 45.0 14 TGAGTGC 25 3.8895167E-5 45.0 13 TTATCCG 20 7.031732E-4 45.0 31 ACGGCGT 20 7.031732E-4 45.0 31 CCATACG 20 7.031732E-4 45.0 27 AACGACT 20 7.031732E-4 45.0 32 CGGTCTA 20 7.031732E-4 45.0 31 GACGATG 20 7.031732E-4 45.0 1 CGCAATC 25 3.8895167E-5 45.0 20 ACTCACG 25 3.8895167E-5 45.0 1 TCGACAG 20 7.031732E-4 45.0 1 TGTCGAA 20 7.031732E-4 45.0 36 >>END_MODULE