SRR2934913.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934913.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1287791
Sequences flagged as poor quality	0
Sequence length	51
%GC	37

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	49506	3.8442573367883455	No Hit
CCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTCTGC	3523	0.2735692360018046	No Hit
GCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTCTGC	3236	0.25128301098547823	No Hit
CTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTCTGCT	1888	0.14660764052552006	No Hit
CGCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTCTG	1689	0.13115482248284077	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATCGTGT	25	3.8910675E-5	45.000004	14
CAATGCG	25	3.8910675E-5	45.000004	1
TGTGTCG	20	7.033603E-4	45.0	1
CAATACG	20	7.033603E-4	45.0	11
TAGTGCG	60	0.0	44.999996	1
TAGTACG	30	2.165707E-6	44.999996	1
CGTTTTT	36315	0.0	44.566296	1
TTGTGCG	90	0.0	40.000004	1
CCGTGCG	45	1.9286745E-8	40.000004	1
GTTTTTT	40920	0.0	39.66642	2
CGCACGG	40	3.4586628E-7	39.375	2
GGTTCGT	40	3.4586628E-7	39.375	9
TAAAGCG	70	0.0	38.571426	1
ACGCATG	35	6.248876E-6	38.571426	1
ACGTATG	35	6.248876E-6	38.571426	1
CGGTATT	35	6.248876E-6	38.571426	43
TATGTCG	35	6.248876E-6	38.571426	1
CTCGTAG	30	1.1399985E-4	37.499996	1
TATTCGG	30	1.1399985E-4	37.499996	2
CCGCCGT	30	1.1399985E-4	37.499996	26