##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934913.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1287791 Sequences flagged as poor quality 0 Sequence length 51 %GC 37 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.57848051430706 34.0 31.0 34.0 31.0 34.0 2 32.74373248454136 34.0 31.0 34.0 31.0 34.0 3 32.78618890798274 34.0 31.0 34.0 31.0 34.0 4 36.18986233014519 37.0 37.0 37.0 35.0 37.0 5 36.083134608022576 37.0 35.0 37.0 35.0 37.0 6 36.06970230417824 37.0 35.0 37.0 35.0 37.0 7 36.233596134776526 37.0 37.0 37.0 35.0 37.0 8 36.26242068782901 37.0 37.0 37.0 35.0 37.0 9 38.049013388042006 39.0 39.0 39.0 37.0 39.0 10 37.57512205008421 39.0 38.0 39.0 35.0 39.0 11 37.47383698131141 39.0 37.0 39.0 35.0 39.0 12 37.438760637401565 39.0 37.0 39.0 35.0 39.0 13 37.448340608064505 39.0 37.0 39.0 35.0 39.0 14 38.75611492858702 40.0 38.0 41.0 35.0 41.0 15 38.788033151342105 40.0 38.0 41.0 35.0 41.0 16 38.84757231569409 40.0 38.0 41.0 35.0 41.0 17 38.83168153838628 40.0 38.0 41.0 35.0 41.0 18 38.32285828989331 39.0 38.0 41.0 35.0 41.0 19 37.79835780806047 38.0 37.0 41.0 34.0 41.0 20 37.224490619984145 38.0 35.0 40.0 34.0 41.0 21 37.180546377478954 38.0 35.0 40.0 34.0 41.0 22 36.99151725707044 38.0 35.0 40.0 34.0 41.0 23 36.88334830729521 38.0 35.0 40.0 33.0 41.0 24 36.681785320754685 37.0 35.0 40.0 33.0 41.0 25 36.554058073087944 37.0 35.0 40.0 33.0 41.0 26 36.68174571805518 37.0 35.0 40.0 33.0 41.0 27 36.72421689544344 37.0 35.0 40.0 33.0 41.0 28 36.63309030735577 37.0 35.0 40.0 33.0 41.0 29 36.50125369722261 37.0 35.0 40.0 33.0 41.0 30 36.19247921440669 37.0 35.0 40.0 32.0 41.0 31 35.62501135665648 37.0 35.0 40.0 30.0 41.0 32 34.81193066266188 37.0 35.0 40.0 22.0 41.0 33 33.780230643015834 37.0 34.0 40.0 15.0 41.0 34 32.878556380654935 37.0 33.0 40.0 10.0 41.0 35 32.31801821879482 37.0 31.0 40.0 8.0 41.0 36 32.05872614422682 37.0 31.0 40.0 8.0 41.0 37 31.805687413563227 37.0 30.0 40.0 7.0 41.0 38 31.63508131366037 37.0 29.0 40.0 7.0 41.0 39 31.59447922838411 37.0 29.0 40.0 7.0 41.0 40 31.509449902973387 37.0 27.0 40.0 7.0 41.0 41 31.38190746790434 37.0 27.0 40.0 7.0 41.0 42 31.239770273281923 37.0 25.0 40.0 7.0 41.0 43 31.145493329274704 37.0 24.0 40.0 7.0 41.0 44 31.041291638161784 36.0 24.0 40.0 7.0 41.0 45 31.006936684601772 36.0 23.0 40.0 7.0 41.0 46 30.960630257549557 36.0 23.0 40.0 7.0 41.0 47 30.910542160956243 36.0 23.0 40.0 7.0 41.0 48 30.832535714257983 35.0 23.0 40.0 7.0 41.0 49 30.70434954119108 35.0 24.0 40.0 7.0 41.0 50 30.607664597749167 35.0 24.0 40.0 7.0 41.0 51 30.05465716098342 35.0 23.0 39.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 5.0 9 6.0 10 12.0 11 11.0 12 17.0 13 29.0 14 34.0 15 77.0 16 134.0 17 247.0 18 466.0 19 968.0 20 1597.0 21 2522.0 22 4233.0 23 7470.0 24 14912.0 25 32582.0 26 57220.0 27 68768.0 28 61245.0 29 47630.0 30 38367.0 31 33729.0 32 32764.0 33 37779.0 34 66006.0 35 83250.0 36 85622.0 37 116890.0 38 215450.0 39 277555.0 40 193.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.530328290848438 15.616742157694844 18.61660781912593 37.236321732330794 2 51.14906067832435 17.86338000498528 18.674614126049956 12.312945190640406 3 22.495886366654215 17.753812536351006 47.59304887206076 12.157252224934014 4 20.2416385888704 19.2649273057507 47.33136044591086 13.162073659468035 5 18.854301668516086 21.701891067727605 45.536193372992976 13.907613890763331 6 19.28488396020783 24.58232741182381 45.05878671306136 11.074001914907 7 58.78686836606251 4.447849068676517 33.28521475922723 3.480067806033743 8 60.16543057064384 3.7521616473480552 32.59861266307965 3.4837951189284593 9 55.793137240437304 5.509279067799045 34.218363072889936 4.479220618873715 10 29.14510196142076 20.66453329771679 40.160088088828076 10.030276652034376 11 22.26440470542192 18.350104947153692 45.74678655154447 13.638703795879922 12 19.66002247259066 16.423860704104936 49.395592918416106 14.520523904888293 13 17.651000822338407 18.487471957794394 49.92285238831457 13.938674831552635 14 14.90001094898163 20.644654295611634 48.7110874357718 15.74424731963494 15 14.752549132584402 19.467832901456834 51.65574227494989 14.123875691008866 16 16.632745530913013 18.678807353056513 49.5579639863922 15.130483129638272 17 16.52838076986095 18.81252470315447 47.799138214197804 16.85995631278678 18 16.851026292309854 19.232856884385743 48.89178445881358 15.024332364490823 19 16.85708317576377 20.656457453111567 47.34914283451274 15.13731653661192 20 17.963163277270926 20.379626818326887 47.56152201715962 14.095687887242573 21 17.672898785594867 20.774256071055007 47.56159966951159 13.991245473838534 22 16.506793416012382 19.350267240569316 46.8204079699268 17.322531373491508 23 15.710235589470653 19.953936624809458 47.58008092928122 16.755746856438662 24 16.653323404185926 18.63803986827055 48.54514435960493 16.163492367938588 25 15.69400624790824 20.31043857271871 46.5912558792537 17.40429930011935 26 15.555862713747807 20.731857886877606 47.524637149972314 16.18764224940227 27 16.361894127230272 20.134478343147297 47.4503238491339 16.053303680488526 28 14.436038145941382 20.31688371793249 48.72537546853488 16.52170266759125 29 16.59694779665334 19.301967477641945 47.305424560351796 16.795660165352917 30 18.43031982674207 19.992607496092145 45.99294450729971 15.584128169866073 31 18.41214917638033 21.028800480823364 44.76634795553005 15.792702387266258 32 18.97272150527531 23.018564347786246 42.45386091376629 15.554853233172153 33 19.370223895026445 23.602975948737022 40.39490880119522 16.631891355041304 34 18.657375303911895 23.87204134832438 39.853594255589606 17.61698909217412 35 18.99027093682127 25.96663589045117 37.040327195950276 18.002765976777287 36 20.47343085951059 27.312118193091887 35.682265212289884 16.53218573510764 37 19.49143921645671 28.026908093005776 36.39953998746691 16.082112703070607 38 18.576694510211674 28.69200048765677 35.252459444117875 17.478845558013685 39 20.24451172589341 27.38278183338756 34.77388799890665 17.598818441812377 40 21.12679774901362 25.924160053921792 35.25315831528563 17.695883881778954 41 19.13089934624485 27.228098348256818 33.85828911678991 19.782713188708417 42 18.913938674831552 27.04196566057691 34.4153670898461 19.628728574745434 43 19.549445523380733 25.945359146010492 34.84944373737664 19.655751593232132 44 18.774475050687574 25.433707798858666 35.27490097383815 20.516916176615617 45 19.57670149892335 24.854032991378258 34.601499777526016 20.967765732172378 46 20.502861100908454 25.144297483054316 35.120139836355435 19.232701579681795 47 18.454159098797867 25.28966268594826 37.20588201035727 19.050296204896604 48 18.234247638009585 24.46018026216987 37.13646080769317 20.169111292127372 49 18.9866989286305 23.40799089293216 38.45973453766954 19.145575640767795 50 18.4290773891105 23.43819765784976 37.57123632639147 20.56148862664827 51 17.956019260889384 23.05521625791763 36.06105338521546 22.92771109597753 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 398.0 1 694.0 2 990.0 3 51694.5 4 102399.0 5 70305.5 6 38212.0 7 36147.0 8 34082.0 9 33217.0 10 32352.0 11 31449.5 12 30547.0 13 29225.0 14 27903.0 15 25978.0 16 24053.0 17 22230.0 18 20407.0 19 18810.5 20 17214.0 21 15696.0 22 14178.0 23 13303.5 24 12429.0 25 12419.5 26 12823.5 27 13237.0 28 14501.0 29 15765.0 30 16680.5 31 17596.0 32 19999.0 33 22402.0 34 23997.0 35 25592.0 36 28155.5 37 30719.0 38 33742.0 39 36765.0 40 40566.5 41 44368.0 42 50908.0 43 57448.0 44 62256.5 45 67065.0 46 76938.0 47 86811.0 48 93297.0 49 99783.0 50 98209.5 51 96636.0 52 83474.5 53 70313.0 54 61010.5 55 51708.0 56 47095.5 57 42483.0 58 39486.0 59 36489.0 60 34216.0 61 31943.0 62 29054.0 63 26165.0 64 22180.0 65 18195.0 66 14309.0 67 10423.0 68 8661.0 69 6899.0 70 5633.5 71 4368.0 72 3599.0 73 2830.0 74 2444.0 75 1572.0 76 1086.0 77 820.0 78 554.0 79 440.5 80 327.0 81 214.0 82 101.0 83 63.5 84 26.0 85 20.0 86 14.0 87 13.5 88 13.0 89 19.5 90 26.0 91 16.5 92 7.0 93 4.0 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1287791.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.39727016189601 #Duplication Level Percentage of deduplicated Percentage of total 1 78.81783657276502 30.263897644606264 2 9.20988200184755 7.07268654768248 3 3.157232736202938 3.636873550078991 4 1.569428007849637 2.4104700486819506 5 0.9562707656890761 1.8359093469043304 6 0.6929749624970902 1.5965008110258316 7 0.5197477831999122 1.3969827233301508 8 0.41022193483106334 1.2601121966435231 9 0.36145451617766633 1.2490980038020139 >10 4.046936160969129 34.19345646890374 >50 0.19249250242273855 4.586513803536703 >100 0.058928641338050716 4.107035909208738 >500 0.00473901646354387 1.2834882557059781 >1k 0.0016483535525369985 1.1902903782960266 >5k 0.0 0.0 >10k+ 2.0604419406712482E-4 3.9166843115934262 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 49506 3.8442573367883455 No Hit CCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTCTGC 3523 0.2735692360018046 No Hit GCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTCTGC 3236 0.25128301098547823 No Hit CTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTCTGCT 1888 0.14660764052552006 No Hit CGCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTCTG 1689 0.13115482248284077 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.553047039465255E-4 0.0 0.0 0.1571683603938838 0.0 2 1.553047039465255E-4 0.0 0.0 0.8802670619689065 0.0 3 1.553047039465255E-4 0.0 0.0 1.2953188832659959 0.0 4 1.553047039465255E-4 0.0 0.0 1.7043914734611438 0.0 5 1.553047039465255E-4 0.0 0.0 2.755105448011362 0.0 6 1.553047039465255E-4 0.0 0.0 3.334469646083875 0.0 7 1.553047039465255E-4 0.0 0.0 3.9737038075277744 0.0 8 1.553047039465255E-4 0.0 0.0 4.933797487325195 0.0 9 1.553047039465255E-4 0.0 0.0 5.306606429148829 0.0 10 1.553047039465255E-4 0.0 0.0 6.1565890738481635 0.0 11 1.553047039465255E-4 0.0 0.0 7.310503024170847 0.0 12 1.553047039465255E-4 0.0 0.0 8.306394438227942 0.0 13 1.553047039465255E-4 0.0 0.0 8.670583968982545 0.0 14 1.553047039465255E-4 0.0 0.0 8.818356394787664 0.0 15 1.553047039465255E-4 0.0 0.0 9.08175317268097 0.0 16 1.553047039465255E-4 0.0 0.0 9.641393673352276 0.0 17 1.553047039465255E-4 0.0 0.0 10.375829618315395 0.0 18 1.553047039465255E-4 0.0 0.0 11.175105277176188 0.0 19 1.553047039465255E-4 0.0 0.0 11.682641049673434 0.0 20 1.553047039465255E-4 0.0 0.0 12.16548337424318 0.0 21 1.553047039465255E-4 0.0 0.0 12.746012357595292 0.0 22 1.553047039465255E-4 0.0 0.0 13.365056907526144 0.0 23 1.553047039465255E-4 0.0 0.0 13.9916337355984 0.0 24 1.553047039465255E-4 0.0 0.0 14.51283632204294 0.0 25 1.553047039465255E-4 0.0 0.0 14.956619513570137 0.0 26 1.553047039465255E-4 0.0 0.0 15.366158017877124 0.0 27 1.553047039465255E-4 0.0 0.0 15.777094264519631 0.0 28 2.3295705591978822E-4 0.0 0.0 16.191058952889094 0.0 29 2.3295705591978822E-4 0.0 0.0 16.627076909218964 0.0 30 2.3295705591978822E-4 0.0 0.0 17.116364379002494 0.0 31 2.3295705591978822E-4 0.0 0.0 17.574280298588825 0.0 32 3.882617598663137E-4 0.0 0.0 18.01355965370157 0.0 33 3.882617598663137E-4 0.0 0.0 18.428223213238795 0.0 34 3.882617598663137E-4 0.0 0.0 18.858960809634482 0.0 35 4.6591411183957644E-4 0.0 0.0 19.296065898891978 0.0 36 4.6591411183957644E-4 0.0 0.0 19.724629229432416 0.0 37 4.6591411183957644E-4 0.0 0.0 20.1576963963873 0.0 38 4.6591411183957644E-4 0.0 0.0 20.602644373194096 0.0 39 4.6591411183957644E-4 0.0 0.0 21.044253298866042 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATCGTGT 25 3.8910675E-5 45.000004 14 CAATGCG 25 3.8910675E-5 45.000004 1 TGTGTCG 20 7.033603E-4 45.0 1 CAATACG 20 7.033603E-4 45.0 11 TAGTGCG 60 0.0 44.999996 1 TAGTACG 30 2.165707E-6 44.999996 1 CGTTTTT 36315 0.0 44.566296 1 TTGTGCG 90 0.0 40.000004 1 CCGTGCG 45 1.9286745E-8 40.000004 1 GTTTTTT 40920 0.0 39.66642 2 CGCACGG 40 3.4586628E-7 39.375 2 GGTTCGT 40 3.4586628E-7 39.375 9 TAAAGCG 70 0.0 38.571426 1 ACGCATG 35 6.248876E-6 38.571426 1 ACGTATG 35 6.248876E-6 38.571426 1 CGGTATT 35 6.248876E-6 38.571426 43 TATGTCG 35 6.248876E-6 38.571426 1 CTCGTAG 30 1.1399985E-4 37.499996 1 TATTCGG 30 1.1399985E-4 37.499996 2 CCGCCGT 30 1.1399985E-4 37.499996 26 >>END_MODULE