##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934912.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1275580 Sequences flagged as poor quality 0 Sequence length 51 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.64987770269211 34.0 31.0 34.0 31.0 34.0 2 32.80275874504147 34.0 31.0 34.0 31.0 34.0 3 32.84421439658822 34.0 31.0 34.0 31.0 34.0 4 36.234885307076 37.0 37.0 37.0 35.0 37.0 5 36.12434030009878 37.0 37.0 37.0 35.0 37.0 6 36.119211652738365 37.0 36.0 37.0 35.0 37.0 7 36.24775004311764 37.0 37.0 37.0 35.0 37.0 8 36.25867683720347 37.0 37.0 37.0 35.0 37.0 9 38.028545445993196 39.0 39.0 39.0 35.0 39.0 10 37.62705592749965 39.0 38.0 39.0 35.0 39.0 11 37.51813057589489 39.0 37.0 39.0 35.0 39.0 12 37.442521049248185 39.0 37.0 39.0 35.0 39.0 13 37.42582197902131 39.0 37.0 39.0 35.0 39.0 14 38.74882876808981 40.0 38.0 41.0 35.0 41.0 15 38.7943304222393 40.0 38.0 41.0 35.0 41.0 16 38.863128929584974 40.0 38.0 41.0 35.0 41.0 17 38.835702974333245 40.0 38.0 41.0 35.0 41.0 18 38.3096144498973 39.0 38.0 41.0 35.0 41.0 19 37.80492011477132 38.0 37.0 41.0 35.0 41.0 20 37.228729675912135 38.0 35.0 41.0 34.0 41.0 21 37.17331802003795 38.0 35.0 41.0 34.0 41.0 22 36.99736747205193 38.0 35.0 41.0 34.0 41.0 23 36.88468069427241 38.0 35.0 40.0 33.0 41.0 24 36.6992850311231 37.0 35.0 40.0 33.0 41.0 25 36.54517866382351 37.0 35.0 40.0 33.0 41.0 26 36.65351526364477 37.0 35.0 40.0 33.0 41.0 27 36.670227661142384 37.0 35.0 40.0 33.0 41.0 28 36.5819478198153 37.0 35.0 40.0 33.0 41.0 29 36.41831480581383 37.0 35.0 40.0 33.0 41.0 30 36.1020994371188 37.0 35.0 40.0 32.0 41.0 31 35.575613446432214 37.0 35.0 40.0 30.0 41.0 32 34.79563806268521 37.0 35.0 40.0 22.0 41.0 33 33.81932532651813 37.0 34.0 40.0 16.0 41.0 34 32.97374135687295 37.0 33.0 40.0 10.0 41.0 35 32.46123018548425 37.0 32.0 40.0 9.0 41.0 36 32.23468931780053 37.0 31.0 40.0 8.0 41.0 37 31.98433732106179 37.0 30.0 40.0 8.0 41.0 38 31.835060913466815 37.0 30.0 40.0 7.0 41.0 39 31.75114144154032 37.0 29.0 40.0 7.0 41.0 40 31.621060223584564 36.0 29.0 40.0 7.0 41.0 41 31.473164364445978 36.0 28.0 40.0 7.0 41.0 42 31.335023283525924 36.0 27.0 40.0 7.0 41.0 43 31.225408049671522 36.0 26.0 40.0 7.0 41.0 44 31.111865974693863 36.0 25.0 40.0 7.0 41.0 45 31.06914815221311 35.0 24.0 40.0 7.0 41.0 46 31.033684284795935 35.0 24.0 40.0 7.0 41.0 47 31.01390426315872 35.0 24.0 40.0 7.0 41.0 48 30.965371046896315 35.0 24.0 40.0 7.0 41.0 49 30.849750701641607 35.0 24.0 40.0 7.0 41.0 50 30.747731228147195 35.0 24.0 40.0 7.0 41.0 51 30.184918233274274 35.0 24.0 39.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 9.0 10 18.0 11 17.0 12 29.0 13 39.0 14 55.0 15 86.0 16 160.0 17 310.0 18 589.0 19 1114.0 20 1865.0 21 2881.0 22 4377.0 23 7285.0 24 13646.0 25 27886.0 26 51211.0 27 66815.0 28 63635.0 29 50332.0 30 39458.0 31 34255.0 32 32245.0 33 37316.0 34 67227.0 35 84477.0 36 86818.0 37 110675.0 38 202741.0 39 287816.0 40 189.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.803132692579066 15.323617491650857 17.850468022389816 38.02278179338027 2 50.7815268348516 18.05225858041048 18.467442261559448 12.698772323178476 3 23.24519042318004 17.98107527556092 46.249078850405304 12.52465545085373 4 21.091111494379028 18.536038507972844 46.83124539425202 13.5416046033961 5 19.350099562551936 21.69609118989009 44.94951316263974 14.004296084918233 6 19.84258141394503 25.24694648708823 43.66539142978097 11.245080669185782 7 59.28510951880713 4.32070117123191 32.99965505887518 3.3945342510857803 8 60.702895937534294 4.027579610843695 32.11503786512802 3.1544865864939866 9 56.421157434265204 5.354270214333871 33.49205851455808 4.732513836842847 10 31.10341962087835 19.20389156305367 38.68459837877671 11.008090437291271 11 24.934774769124633 18.780162749494348 43.192586901644745 13.092475579736277 12 22.643503347496825 16.486382665140564 45.99758541212625 14.872528575236363 13 18.92840903745747 17.349989808557677 47.37640916289061 16.345191991094246 14 15.335768826729801 19.728202072782576 47.47824519042318 17.457783910064443 15 15.165650135624578 18.146568619765127 50.742093792627664 15.945687451982627 16 17.625001959892757 17.692892644914473 48.61012245409931 16.071982941093463 17 17.364336223521846 17.855014973580648 46.96835949136863 17.812289311528872 18 17.820756048229043 18.655199987456687 46.89921447498393 16.624829489330345 19 19.19385691214977 19.68853384342809 45.4350961915364 15.682513052885746 20 21.032549898869533 18.884977814014018 45.80465356935669 14.277818717759763 21 19.50728296147635 19.417519873312532 45.7478166794713 15.32738048573982 22 18.519105034572508 18.38442120447169 45.79579485410558 17.300678906850216 23 18.226375452735226 19.15434547421565 46.64411483403628 15.975164239012841 24 18.705059659135454 17.591370200222645 46.81352796374982 16.89004217689208 25 17.44963075620502 18.967214913999904 45.62034525470766 17.96280907508741 26 17.08258204111071 19.799542169052508 46.386741717493216 16.73113407234356 27 17.381034509791622 19.596810862509603 46.19020367205506 16.831950955643705 28 16.154690415340472 20.405462613085813 46.67351322535631 16.766333746217406 29 17.916634001787422 19.67238432712962 45.62065883754841 16.79032283353455 30 18.273334483137084 19.294908982580473 45.765769297104065 16.66598723717838 31 19.18946675237931 20.216842534376518 43.56559369071324 17.02809702253093 32 20.073848758995908 21.943978425500557 41.51546747361984 16.466705341883692 33 20.13813324134903 22.78978974270528 40.0526035215353 17.019473494410388 34 19.7889587481773 24.08175104658273 38.64022640681102 17.48906379842895 35 19.357860737860424 25.24200755734646 36.67194531115258 18.728186393640538 36 20.690431019614607 27.556248922058984 34.51723921667006 17.236080841656346 37 20.589770927734836 27.903228335345492 34.818513930917696 16.688486806001976 38 20.418554696686996 26.910425061540632 34.058859499208204 18.612160742564164 39 21.47125229307452 26.40861412063532 33.70748992615124 18.412643660138915 40 21.241944840778313 25.14636479091864 35.20963012903934 18.402060239263708 41 18.882469151288042 26.810940905313664 34.277818717759764 20.028771225638533 42 20.011132190846517 26.376550275168942 34.023267846783426 19.589049687201115 43 20.86313676915599 26.39481647564245 33.13888584016683 19.603160915034728 44 20.230404992238824 26.256291255742486 33.294501324887506 20.218802427131187 45 19.849009862180342 25.330124335596356 33.57562834161715 21.245237460606155 46 19.723655121591747 25.964816005268194 34.420342118879255 19.891186754260808 47 18.895639630599415 25.630771884162503 36.55748757427993 18.916100910958153 48 19.1581868640148 23.934523902852035 36.80780507690619 20.09948415622697 49 19.320387588391164 23.75938788629486 37.240941375687925 19.679283149626052 50 18.47943680521802 23.68812618573512 37.06196396933159 20.770473039715267 51 17.853525455087098 23.521064927327178 36.427899465341255 22.19751015224447 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 377.0 1 745.0 2 1113.0 3 53021.5 4 104930.0 5 72995.0 6 41060.0 7 38395.5 8 35731.0 9 34371.5 10 33012.0 11 31282.5 12 29553.0 13 27726.0 14 25899.0 15 23769.0 16 21639.0 17 20084.0 18 18529.0 19 16933.5 20 15338.0 21 13880.5 22 12423.0 23 11594.0 24 10765.0 25 10800.5 26 10811.5 27 10787.0 28 12036.5 29 13286.0 30 14781.0 31 16276.0 32 17447.5 33 18619.0 34 20585.5 35 22552.0 36 24384.5 37 26217.0 38 28907.0 39 31597.0 40 35371.0 41 39145.0 42 43555.5 43 47966.0 44 52160.0 45 56354.0 46 62822.5 47 69291.0 48 72280.5 49 75270.0 50 76448.0 51 77626.0 52 71843.0 53 66060.0 54 61766.0 55 57472.0 56 55273.0 57 53074.0 58 51799.0 59 50524.0 60 50965.0 61 51406.0 62 47636.5 63 43867.0 64 37165.5 65 30464.0 66 25331.5 67 20199.0 68 16448.0 69 12697.0 70 10904.0 71 9111.0 72 7615.0 73 6119.0 74 4815.0 75 2874.5 76 2238.0 77 1873.0 78 1508.0 79 1034.0 80 560.0 81 448.5 82 337.0 83 241.5 84 146.0 85 106.0 86 66.0 87 39.0 88 12.0 89 10.0 90 8.0 91 5.0 92 2.0 93 2.0 94 2.0 95 1.5 96 1.0 97 2.5 98 4.0 99 2.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1275580.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.2724381840111 #Duplication Level Percentage of deduplicated Percentage of total 1 79.40754061065189 27.21490026922918 2 8.273881861915939 5.671322093086493 3 2.749687481948111 2.827154827512473 4 1.327428929767547 1.8197690375650506 5 0.8485148885381498 1.4540337032818407 6 0.571662946127669 1.1755369789950123 7 0.4598089199793928 1.1031140950515455 8 0.3904109735912579 1.0704268767012783 9 0.3466869412068242 1.0693626085543295 >10 5.344359831459283 42.35750982492287 >50 0.20698330955883823 4.381731085213116 >100 0.06626664121661173 4.06490381075159 >500 0.0041999983687512335 0.9655456018012064 >1k 0.0023333324270840184 1.0640673991690286 >5k 0.0 0.0 >10k+ 2.3333324270840186E-4 3.760621788164944 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 47026 3.6866366672415682 No Hit CCTGTCTCTTATACACATCTGACGCGTGAGATGTCGTATGCCGTCTTCTGC 1954 0.1531852177048872 RNA PCR Primer, Index 17 (95% over 24bp) GCTGTCTCTTATACACATCTGACGCGTGAGATGTCGTATGCCGTCTTCTGC 1833 0.14369933677229182 RNA PCR Primer, Index 47 (95% over 23bp) GAATGATACCTGTCTCTTATACACATCTGACGCGTGAGATGTCGTATGCCG 1476 0.11571206823562616 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 1320 0.10348233744649493 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGTGAGATGTCGTATGC 1279 0.10026811332883864 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.839571018673858E-5 0.0 0.0 0.09164458520829741 0.0 2 7.839571018673858E-5 0.0 0.0 0.5076122234591323 0.0 3 7.839571018673858E-5 0.0 0.0 0.7518932564010098 0.0 4 7.839571018673858E-5 0.0 0.0 0.9838661628435692 0.0 5 7.839571018673858E-5 0.0 0.0 1.6471722667335644 0.0 6 7.839571018673858E-5 0.0 0.0 2.01672964455385 0.0 7 7.839571018673858E-5 0.0 0.0 2.4022013515420437 0.0 8 7.839571018673858E-5 0.0 0.0 2.9838191254174573 0.0 9 7.839571018673858E-5 0.0 0.0 3.2137537433951615 0.0 10 7.839571018673858E-5 0.0 0.0 3.7955283086909484 0.0 11 7.839571018673858E-5 0.0 0.0 4.473259223255304 0.0 12 7.839571018673858E-5 0.0 0.0 5.12739302905345 0.0 13 7.839571018673858E-5 0.0 0.0 5.357249251320968 0.0 14 7.839571018673858E-5 0.0 0.0 5.4528920177487885 0.0 15 7.839571018673858E-5 0.0 0.0 5.640022577964534 0.0 16 7.839571018673858E-5 0.0 0.0 6.005033004593988 0.0 17 7.839571018673858E-5 0.0 0.0 6.454867589645494 0.0 18 7.839571018673858E-5 0.0 0.0 6.9192053810815475 0.0 19 7.839571018673858E-5 0.0 0.0 7.257718057667884 0.0 20 7.839571018673858E-5 0.0 0.0 7.565421220150833 0.0 21 7.839571018673858E-5 0.0 0.0 7.939839132002697 0.0 22 1.5679142037347717E-4 0.0 0.0 8.338010944041143 0.0 23 1.5679142037347717E-4 0.0 0.0 8.738221044544442 0.0 24 1.5679142037347717E-4 0.0 0.0 9.0553316922498 0.0 25 1.5679142037347717E-4 0.0 0.0 9.348923626899136 0.0 26 1.5679142037347717E-4 0.0 0.0 9.625582088148137 0.0 27 1.5679142037347717E-4 0.0 0.0 9.884758306025494 0.0 28 1.5679142037347717E-4 0.0 0.0 10.154674736198436 0.0 29 1.5679142037347717E-4 0.0 0.0 10.41463491117766 0.0 30 1.5679142037347717E-4 0.0 0.0 10.736841280045155 0.0 31 2.3518713056021575E-4 0.0 0.0 11.03623449724831 0.0 32 2.3518713056021575E-4 0.0 0.0 11.32614183351887 0.0 33 2.3518713056021575E-4 0.0 0.0 11.615422004107936 0.0 34 2.3518713056021575E-4 0.0 0.0 11.89537308518478 0.0 35 2.3518713056021575E-4 0.0 0.0 12.189200206964674 0.0 36 3.1358284074695434E-4 0.0 0.0 12.497295347998557 0.0 37 3.1358284074695434E-4 0.0 0.0 12.78641872716725 0.0 38 3.1358284074695434E-4 0.0 0.0 13.09482745104188 0.0 39 3.1358284074695434E-4 0.0 0.0 13.416641841358441 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACGATC 20 7.033579E-4 45.0 11 TATAGCG 20 7.033579E-4 45.0 1 TCGGTAA 25 3.891047E-5 45.0 33 CTATGCG 30 2.1656906E-6 44.999996 1 ACGTTAG 30 2.1656906E-6 44.999996 1 TATACGG 30 2.1656906E-6 44.999996 2 CGTTTTT 35870 0.0 44.43546 1 CAGTACG 55 6.184564E-11 40.909092 1 GTACGAG 95 0.0 40.263157 1 GTTTTTT 39785 0.0 40.192913 2 ACTAACG 40 3.4586265E-7 39.375 1 AACGTAG 30 1.13999224E-4 37.499996 1 TACCGGC 30 1.13999224E-4 37.499996 25 TAACGGG 285 0.0 37.10526 3 ACAACGA 165 0.0 36.81818 13 CACAACG 165 0.0 36.81818 12 ACCGGGT 50 4.879621E-8 36.0 4 TACGTCC 25 0.002107195 36.0 33 GTTGATC 140 0.0 35.357143 16 TCGACAC 250 0.0 35.100002 34 >>END_MODULE