##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934910.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1131094 Sequences flagged as poor quality 0 Sequence length 51 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.56544283675804 34.0 31.0 34.0 31.0 34.0 2 32.72319895605494 34.0 31.0 34.0 31.0 34.0 3 32.78319220153232 34.0 31.0 34.0 31.0 34.0 4 36.1849722481067 37.0 37.0 37.0 35.0 37.0 5 36.06578940388685 37.0 35.0 37.0 35.0 37.0 6 36.045957276760376 37.0 35.0 37.0 35.0 37.0 7 36.1984308996423 37.0 37.0 37.0 35.0 37.0 8 36.2088880322944 37.0 37.0 37.0 35.0 37.0 9 37.96482697282454 39.0 39.0 39.0 35.0 39.0 10 37.55268262407899 39.0 37.0 39.0 35.0 39.0 11 37.43586209457393 39.0 37.0 39.0 34.0 39.0 12 37.38610672499368 39.0 37.0 39.0 35.0 39.0 13 37.357491950271154 39.0 37.0 39.0 34.0 39.0 14 38.64542204273031 40.0 38.0 41.0 35.0 41.0 15 38.68420484946432 40.0 38.0 41.0 35.0 41.0 16 38.77323900577671 40.0 38.0 41.0 35.0 41.0 17 38.793130367591026 40.0 38.0 41.0 35.0 41.0 18 38.31565015816546 39.0 38.0 41.0 35.0 41.0 19 37.8425029219499 38.0 37.0 41.0 35.0 41.0 20 37.28361214894606 38.0 35.0 41.0 34.0 41.0 21 37.2224527758082 38.0 35.0 41.0 34.0 41.0 22 37.028031268842376 38.0 35.0 40.0 34.0 41.0 23 36.92179606646309 38.0 35.0 40.0 33.0 41.0 24 36.71214770832486 37.0 35.0 40.0 33.0 41.0 25 36.54547721055898 37.0 35.0 40.0 33.0 41.0 26 36.67132793560924 38.0 35.0 40.0 33.0 41.0 27 36.721102755385495 38.0 35.0 40.0 33.0 41.0 28 36.66903281248066 38.0 35.0 40.0 33.0 41.0 29 36.561693369428184 38.0 35.0 40.0 33.0 41.0 30 36.29896012179359 38.0 35.0 40.0 33.0 41.0 31 35.82659796621678 38.0 35.0 40.0 31.0 41.0 32 35.14702756800054 38.0 35.0 40.0 24.0 41.0 33 34.25635800384406 38.0 34.0 40.0 18.0 41.0 34 33.46480398622926 38.0 33.0 40.0 12.0 41.0 35 32.960260597262476 38.0 33.0 40.0 10.0 41.0 36 32.721612880980715 38.0 33.0 40.0 10.0 41.0 37 32.461512482605336 37.0 32.0 40.0 8.0 41.0 38 32.30630699128454 37.0 31.0 40.0 8.0 41.0 39 32.21384960047529 37.0 31.0 40.0 8.0 41.0 40 32.07786974380556 37.0 31.0 40.0 8.0 41.0 41 31.943305330945083 37.0 30.0 40.0 8.0 41.0 42 31.801315363709826 37.0 30.0 40.0 7.0 41.0 43 31.707298420820905 37.0 29.0 40.0 7.0 41.0 44 31.60189780867019 36.0 29.0 40.0 7.0 41.0 45 31.558047341777076 36.0 29.0 40.0 7.0 41.0 46 31.50078154423947 36.0 28.0 40.0 7.0 41.0 47 31.478803706853718 36.0 28.0 40.0 7.0 41.0 48 31.419378937559568 36.0 28.0 40.0 7.0 41.0 49 31.31831129861886 36.0 27.0 40.0 7.0 41.0 50 31.24495311618663 35.0 27.0 40.0 7.0 41.0 51 30.70098329581803 35.0 26.0 40.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 3.0 9 2.0 10 9.0 11 14.0 12 12.0 13 18.0 14 31.0 15 74.0 16 106.0 17 242.0 18 492.0 19 812.0 20 1457.0 21 2130.0 22 3540.0 23 5907.0 24 11250.0 25 23853.0 26 42445.0 27 55217.0 28 51436.0 29 41631.0 30 32362.0 31 28097.0 32 27811.0 33 34097.0 34 59028.0 35 82900.0 36 80969.0 37 105352.0 38 190408.0 39 249237.0 40 151.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.799026429279973 16.17451776775405 17.567682261598065 36.45877354136792 2 49.879585604733116 18.710734916815046 17.95518321200537 13.454496266446467 3 23.248200414819635 18.472027965845456 44.88176933128457 13.398002288050332 4 20.99728227715822 19.77439540833918 45.177589130523195 14.050733183979405 5 18.752552838225647 22.94751806657979 43.852411912714594 14.447517182479972 6 19.775898378030472 25.67337462668885 42.96247703550722 11.588249959773458 7 60.281373608205854 4.963513200494388 31.079026146368026 3.676087044931721 8 61.24946290936032 3.9483013790188966 30.87011335927872 3.932122352342069 9 56.17181242230973 6.394693986529855 32.475903859449346 4.957589731711069 10 30.568900551147827 20.835049960480738 37.74487354720297 10.851175941168462 11 23.69387513327805 18.767317305193025 42.92950011228068 14.609307449248249 12 20.804371696782052 17.488113277941533 46.836337209816335 14.871177815460076 13 17.952884552477514 19.401924154844778 47.72804028666052 14.917151006017185 14 15.340281179106247 21.655848231888772 46.643161399494645 16.360709189510334 15 14.806638528716446 19.242874597513556 50.505970326073694 15.444516547696303 16 16.590928782223227 18.756442877426633 48.12111106592379 16.531517274426353 17 16.78269003283547 18.406427759319737 45.64430542465966 19.16657678318513 18 17.178324701572105 18.94051245961874 47.33337812772413 16.54778471108502 19 18.62382790466575 19.62869575826589 45.0854659294453 16.66201040762306 20 19.120692002609864 19.75715546188027 45.424871849731325 15.697280685778548 21 18.530024913932884 20.46531941642339 45.42036294065745 15.584292728986274 22 17.44417351696676 18.602432689060326 44.96823429352468 18.98515950044824 23 16.302977471368425 20.153762640417153 45.46235768203174 18.080902206182685 24 17.034304841153787 18.623297444774707 46.64484118914962 17.69755652492189 25 16.40712442997664 20.090814733346654 45.25477104467003 18.247289792006676 26 15.374407432096712 20.93910850910711 45.36758218149862 18.318901877297556 27 16.732384753168173 20.2989318305994 45.04161457845237 17.927068837780062 28 14.673669916028198 19.929378106505737 46.911397284399 18.485554693067066 29 15.649362475620949 18.954392826767712 45.90476123116204 19.491483466449296 30 16.43249809476489 19.63594537677682 44.0966002825583 19.83495624589999 31 17.43674707849215 21.159691413799383 41.50459643495589 19.898965072752574 32 17.677841098971438 21.739926124619174 41.3978855868743 19.184347189535085 33 17.373003481585084 22.652670777141424 38.980491453407055 20.993834287866438 34 16.38599444431674 23.561613800444526 38.50458052115916 21.54781123407957 35 16.83246485261172 24.28135946260877 36.68731334442584 22.198862340353674 36 18.720371604835673 25.945412140812348 34.42817307845325 20.90604317589873 37 17.95712823160586 27.01588020093821 35.36558411590902 19.661407451546907 38 17.679432478644568 27.649249310844194 34.04747969664767 20.623838513863568 39 18.51313860740133 26.33989747978506 34.58501238623845 20.561951526575157 40 18.792779379963115 26.188451180892123 34.227836059602474 20.790933379542285 41 17.171163493043018 27.065301380787098 32.98903539405213 22.774499732117757 42 17.89541806428113 26.54589273747363 33.203871649924764 22.354817548320476 43 18.752376018261966 25.078552268865362 34.16621430225958 22.00285741061309 44 18.11847644846494 24.604144306308758 34.16860137176928 23.108777873457026 45 18.08576475518392 24.917999741842852 33.71594226474546 23.28029323822777 46 18.71391767616131 25.272170129096256 34.22067485107338 21.793237343669052 47 17.15330467671122 24.60264133661747 36.514029780018284 21.730024206653027 48 17.005483187073754 24.048222340495133 36.09664625574886 22.849648216682255 49 17.41110818375838 23.056527574189236 37.54082330911489 21.991540932937493 50 17.129433981614262 23.1113417629304 37.143774080668805 22.615450174786535 51 17.008665946420017 23.332189897568195 34.99894792121609 24.66019623479569 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 279.0 1 619.5 2 960.0 3 41845.5 4 82731.0 5 57505.5 6 32280.0 7 30293.0 8 28306.0 9 27526.0 10 26746.0 11 26036.0 12 25326.0 13 23930.5 14 22535.0 15 20722.5 16 18910.0 17 17176.5 18 15443.0 19 14252.0 20 13061.0 21 12143.5 22 11226.0 23 10298.5 24 9371.0 25 9697.0 26 10409.5 27 10796.0 28 11644.0 29 12492.0 30 13225.0 31 13958.0 32 15860.0 33 17762.0 34 19671.0 35 21580.0 36 23394.5 37 25209.0 38 26208.0 39 27207.0 40 32063.0 41 36919.0 42 42087.0 43 47255.0 44 53322.0 45 59389.0 46 66880.0 47 74371.0 48 80715.0 49 87059.0 50 86615.0 51 86171.0 52 73654.5 53 61138.0 54 54418.5 55 47699.0 56 45163.5 57 42628.0 58 38523.5 59 34419.0 60 33766.0 61 33113.0 62 29974.5 63 26836.0 64 23830.5 65 20825.0 66 17760.0 67 14695.0 68 12787.5 69 10880.0 70 9152.5 71 7425.0 72 6677.0 73 5929.0 74 4700.0 75 2868.0 76 2265.0 77 1732.0 78 1199.0 79 957.0 80 715.0 81 510.0 82 305.0 83 222.0 84 139.0 85 84.0 86 29.0 87 17.5 88 6.0 89 5.0 90 4.0 91 5.0 92 6.0 93 4.0 94 2.0 95 1.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1131094.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.00683882395536 #Duplication Level Percentage of deduplicated Percentage of total 1 78.26767329496256 26.616361508677876 2 9.291605994318799 6.319562949289938 3 3.396352218549788 3.4649760745681752 4 1.64542457854828 2.2382275375866416 5 0.9529649297012731 1.6203662384616575 6 0.6666276286123333 1.3601938993089118 7 0.47316484633360306 1.1263588466499914 8 0.3504947540359352 0.9535374887313544 9 0.299473559786449 0.9165734171724539 >10 4.031977490329116 33.93649600784369 >50 0.5463773281457324 11.562141099772921 >100 0.07254847041886173 4.204899256681259 >500 0.0034546890672515294 0.8090063862045228 >1k 0.0015944718771930136 0.9545950019524548 >5k 0.0 0.0 >10k+ 2.657453128655023E-4 3.916704287098304 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 43340 3.831688612971159 No Hit GCTGTCTCTTATACACATCTGACGCCCCTCAAATCGTATGCCGTCTTCTGC 3143 0.2778725729249735 No Hit CCTGTCTCTTATACACATCTGACGCCCCTCAAATCGTATGCCGTCTTCTGC 2757 0.24374631993450585 No Hit CTGTCTCTTATACACATCTGACGCCCCTCAAATCGTATGCCGTCTTCTGCT 1386 0.12253623483105738 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 1139 0.1006989693164317 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.5363992736235894E-4 0.0 0.0 0.13128882303327574 0.0 2 3.5363992736235894E-4 0.0 0.0 0.8706615011661276 0.0 3 3.5363992736235894E-4 0.0 0.0 1.2568363018458235 0.0 4 3.5363992736235894E-4 0.0 0.0 1.656891469674492 0.0 5 3.5363992736235894E-4 0.0 0.0 2.7215244709988737 0.0 6 3.5363992736235894E-4 0.0 0.0 3.3197064081323036 0.0 7 3.5363992736235894E-4 0.0 0.0 3.947417279200491 0.0 8 3.5363992736235894E-4 0.0 0.0 4.971646918823723 0.0 9 3.5363992736235894E-4 0.0 0.0 5.376122585744421 0.0 10 3.5363992736235894E-4 0.0 0.0 6.173315392001019 0.0 11 3.5363992736235894E-4 0.0 0.0 7.258017459203214 0.0 12 3.5363992736235894E-4 0.0 0.0 8.14485798704617 0.0 13 3.5363992736235894E-4 0.0 0.0 8.48355662747747 0.0 14 3.5363992736235894E-4 0.0 0.0 8.614757040528904 0.0 15 3.5363992736235894E-4 0.0 0.0 8.871941677703179 0.0 16 3.5363992736235894E-4 0.0 0.0 9.42671431375288 0.0 17 3.5363992736235894E-4 0.0 0.0 10.114455562490827 0.0 18 4.4204990920294863E-4 0.0 0.0 10.914742718111846 0.0 19 4.4204990920294863E-4 0.0 0.0 11.324876623870342 0.0 20 4.4204990920294863E-4 0.0 0.0 11.730324800591285 0.0 21 4.4204990920294863E-4 0.0 0.0 12.234173287100807 0.0 22 4.4204990920294863E-4 0.0 0.0 12.767639117526926 0.0 23 4.4204990920294863E-4 0.0 0.0 13.311537325810233 0.0 24 4.4204990920294863E-4 0.0 0.0 13.73687774844531 0.0 25 4.4204990920294863E-4 0.0 0.0 14.124555518816296 0.0 26 4.4204990920294863E-4 0.0 0.0 14.47748816632393 0.0 27 4.4204990920294863E-4 0.0 0.0 14.8206957158291 0.0 28 4.4204990920294863E-4 0.0 0.0 15.195465628851359 0.0 29 4.4204990920294863E-4 0.0 0.0 15.561836593598764 0.0 30 5.304598910435384E-4 0.0 0.0 15.984701536742305 0.0 31 5.304598910435384E-4 0.0 0.0 16.363980358838436 0.0 32 5.304598910435384E-4 0.0 0.0 16.723366935020433 0.0 33 5.304598910435384E-4 0.0 0.0 17.086643550403416 0.0 34 6.188698728841281E-4 0.0 0.0 17.449301295913514 0.0 35 6.188698728841281E-4 0.0 0.0 17.83282379713799 0.0 36 6.188698728841281E-4 0.0 0.0 18.190265353719496 0.0 37 6.188698728841281E-4 0.0 0.0 18.542048671463203 0.0 38 6.188698728841281E-4 0.0 0.0 18.89117968975169 0.0 39 6.188698728841281E-4 0.0 0.0 19.227314440709613 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGTTGA 20 7.03324E-4 45.0 14 ATTGTCG 20 7.03324E-4 45.0 12 TCAATCG 20 7.03324E-4 45.0 39 TCTACGT 20 7.03324E-4 45.0 32 ACGTGCA 20 7.03324E-4 45.0 35 CGTAAAG 20 7.03324E-4 45.0 1 CGGTCCA 20 7.03324E-4 45.0 27 TATACGG 50 2.1827873E-11 45.0 2 CGATATA 20 7.03324E-4 45.0 10 CGTTTTT 29355 0.0 44.40214 1 GAGCACG 75 0.0 42.0 1 GTTTTTT 32780 0.0 39.865772 2 TTTAGCG 40 3.4581535E-7 39.375 1 TGTTACG 40 3.4581535E-7 39.375 1 TATAGCG 40 3.4581535E-7 39.375 1 ACGAAGG 160 0.0 39.375 2 CTCAACG 35 6.2482013E-6 38.571426 1 AGATACG 35 6.2482013E-6 38.571426 1 TCGACAG 35 6.2482013E-6 38.571426 1 GTAAGCG 65 9.094947E-12 38.076927 1 >>END_MODULE