SRR2934909.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934909.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1044871
Sequences flagged as poor quality	0
Sequence length	51
%GC	39

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	47992	4.593102880642682	No Hit
GCTGTCTCTTATACACATCTGACGCAAACACCGTCGTATGCCGTCTTCTGC	2825	0.2703683038384643	No Hit
CCTGTCTCTTATACACATCTGACGCAAACACCGTCGTATGCCGTCTTCTGC	2632	0.2518971241425975	No Hit
CTGTCTCTTATACACATCTGACGCAAACACCGTCGTATGCCGTCTTCTGCT	1591	0.1522676004980519	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA	1413	0.1352320047163717	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA	1132	0.10833873272394393	No Hit
TATGAAAACTATGCCCTCGTGTACTCCTGCACCACCTTCTTCTGGCTCTTC	1078	0.10317063063287238	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACTACGC	30	2.1653104E-6	45.000004	26
AACGAGT	30	2.1653104E-6	45.000004	29
CGGCCTA	20	7.032993E-4	45.0	45
GCTATCG	25	3.8905615E-5	45.0	1
TAAACCG	20	7.032993E-4	45.0	25
CGATTCG	25	3.8905615E-5	45.0	10
CGGATAG	20	7.032993E-4	45.0	1
TATTACG	25	3.8905615E-5	45.0	1
AATTACG	25	3.8905615E-5	45.0	1
GCTCGAT	20	7.032993E-4	45.0	22
TATCGAG	20	7.032993E-4	45.0	41
TAGTCCG	20	7.032993E-4	45.0	1
TGCGTAG	25	3.8905615E-5	45.0	1
CGTTTTT	28380	0.0	44.381603	1
CTCATGC	100	0.0	40.5	23
GCGTATG	95	0.0	40.26316	1
GTTTTTT	31560	0.0	40.18061	2
GTTTCGG	45	1.9279469E-8	40.0	2
TACTAGT	45	1.9279469E-8	40.0	40
ACCGTAG	45	1.9279469E-8	40.0	1