##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934909.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1044871 Sequences flagged as poor quality 0 Sequence length 51 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.60247820065826 34.0 31.0 34.0 31.0 34.0 2 32.76734927086693 34.0 31.0 34.0 31.0 34.0 3 32.81382199333698 34.0 31.0 34.0 31.0 34.0 4 36.20577181297978 37.0 37.0 37.0 35.0 37.0 5 36.096247287942724 37.0 35.0 37.0 35.0 37.0 6 36.090682007635394 37.0 36.0 37.0 35.0 37.0 7 36.22533499350637 37.0 37.0 37.0 35.0 37.0 8 36.23594108746438 37.0 37.0 37.0 35.0 37.0 9 38.03302417236195 39.0 39.0 39.0 35.0 39.0 10 37.669923847058634 39.0 38.0 39.0 35.0 39.0 11 37.52411350300659 39.0 37.0 39.0 35.0 39.0 12 37.39177180723745 39.0 37.0 39.0 35.0 39.0 13 37.31126521838581 39.0 37.0 39.0 34.0 39.0 14 38.57467094024047 40.0 38.0 41.0 34.0 41.0 15 38.63133630850124 40.0 38.0 41.0 35.0 41.0 16 38.703118375378395 40.0 38.0 41.0 35.0 41.0 17 38.68607895137294 40.0 38.0 41.0 34.0 41.0 18 38.204843468715275 39.0 38.0 41.0 34.0 41.0 19 37.697160702134525 38.0 37.0 41.0 34.0 41.0 20 37.13866017910345 38.0 35.0 40.0 34.0 41.0 21 37.0837845054557 38.0 35.0 40.0 34.0 41.0 22 36.897996020561386 37.0 35.0 40.0 34.0 41.0 23 36.79649640960463 37.0 35.0 40.0 33.0 41.0 24 36.6117271892894 37.0 35.0 40.0 33.0 41.0 25 36.45186152166153 36.0 35.0 40.0 33.0 41.0 26 36.544803138377844 37.0 35.0 40.0 33.0 41.0 27 36.58166127684662 37.0 35.0 40.0 33.0 41.0 28 36.504758003619585 37.0 35.0 40.0 33.0 41.0 29 36.37370833337321 37.0 35.0 40.0 33.0 41.0 30 36.06426726361436 37.0 35.0 40.0 32.0 41.0 31 35.563611201765575 36.0 35.0 40.0 30.0 41.0 32 34.85328715219391 36.0 35.0 40.0 23.0 41.0 33 33.93726881117382 36.0 34.0 40.0 18.0 41.0 34 33.12834790131988 36.0 33.0 40.0 12.0 41.0 35 32.60228104713405 36.0 33.0 40.0 10.0 41.0 36 32.371234343761095 36.0 32.0 40.0 10.0 41.0 37 32.1160449471753 36.0 31.0 40.0 8.0 41.0 38 31.988251181246298 36.0 31.0 40.0 8.0 41.0 39 31.937229571880167 36.0 31.0 40.0 8.0 41.0 40 31.80030262108911 35.0 30.0 40.0 8.0 41.0 41 31.654916252819724 35.0 30.0 40.0 8.0 41.0 42 31.51616515340171 35.0 29.0 40.0 7.0 41.0 43 31.395047809729622 35.0 29.0 40.0 7.0 41.0 44 31.282138177822908 35.0 28.0 40.0 7.0 41.0 45 31.240102366703642 35.0 27.0 40.0 7.0 41.0 46 31.184114594050367 35.0 27.0 40.0 7.0 41.0 47 31.155774253472437 35.0 27.0 40.0 7.0 41.0 48 31.107170167417795 35.0 27.0 40.0 7.0 41.0 49 30.99324031387607 35.0 27.0 40.0 7.0 41.0 50 30.879165944886978 35.0 26.0 40.0 7.0 41.0 51 30.341111965017692 35.0 24.0 39.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 9.0 10 3.0 11 10.0 12 18.0 13 31.0 14 31.0 15 64.0 16 96.0 17 178.0 18 366.0 19 773.0 20 1228.0 21 1978.0 22 3239.0 23 5553.0 24 10115.0 25 20673.0 26 38013.0 27 50438.0 28 48808.0 29 40875.0 30 33725.0 31 29225.0 32 28561.0 33 34631.0 34 63994.0 35 86211.0 36 78117.0 37 96224.0 38 162600.0 39 208921.0 40 162.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.67071628937926 16.129550920639964 17.924030813373136 37.27570197660764 2 50.564997975826685 18.84117752334977 17.8252626400771 12.768561860746447 3 22.977669013686857 18.718674362672523 45.537295991562594 12.766360632078028 4 21.084133830874816 19.691043200548204 45.73492804374894 13.489894924828041 5 18.76241181925807 22.562976673675507 44.307861927453246 14.366749579613177 6 19.725592920082956 24.96384721176107 43.60959391159292 11.700965956563058 7 58.37926404312112 5.059476241564749 32.65637576313248 3.904883952181657 8 59.51270539616852 4.657512745592518 31.839432810366063 3.990349047872895 9 55.21954384799655 5.894507551649917 33.549787485727904 5.336161114625633 10 33.07499203250928 18.037441942593873 38.39861571428435 10.488950310612505 11 25.67867229543169 17.81119391771807 42.28876100494702 14.221372781903222 12 23.34192450551312 16.090598743768368 46.33471500309608 14.232761747622433 13 18.898313763134396 18.777246186371332 47.12447756708723 15.199962483407042 14 15.094016390540077 20.83520358015487 47.55266439589193 16.518115633413117 15 15.450902551606848 17.749559515002332 51.38509921320431 15.41443872018651 16 17.037797010348648 17.50445748805355 49.15659445041541 16.301151051182394 17 16.690672819898342 17.463208376919255 47.146968381742816 18.699150421439583 18 17.79128715410802 18.106062853691988 47.250617540347086 16.852032451852907 19 18.694460847319906 19.876616347855382 45.260993940878826 16.167928863945885 20 20.389119805219973 19.205433015176034 45.26089823528455 15.14454894431944 21 18.43777844346336 20.890999941619587 45.46475115109904 15.206470463818022 22 17.240214342248947 18.856873240811545 45.80756858980678 18.095343827132726 23 17.52914953137756 18.82787444574498 46.17402531030147 17.468950712576003 24 18.06931190548881 17.566091890769293 46.99718912669602 17.367407077045875 25 16.61075864867529 19.3439190100979 45.42388486234186 18.621437478884953 26 15.318733125907407 20.744857499155398 46.20139711026528 17.735012264671905 27 15.936608442573293 20.468938270848746 45.81455509818915 17.779898188388806 28 14.194575215505074 22.058703897418916 46.92713263168372 16.819588255392294 29 16.13960000803927 20.251973688618023 45.335070070850854 18.273356232491857 30 16.04580852564575 22.077940721869016 44.41390372591449 17.462347026570743 31 18.24971695070492 22.601546028169984 41.30060074401529 17.848136277109806 32 18.756669483601325 22.45482935214012 40.02331388276639 18.765187281492164 33 18.942816864474178 23.965350746647193 38.792157117960016 18.299675270918613 34 17.46694089509614 24.386263950286686 38.52006611342453 19.626729041192643 35 16.88466805950208 25.99794615794677 36.170302362684005 20.94708341986714 36 18.76336887520086 28.87724896183357 34.17914747370728 18.180234689258292 37 19.320471139499517 28.127491336251076 34.6736582793474 17.878379244902 38 17.981454169940594 28.232001845203857 33.413502719474465 20.373041265381087 39 20.05472445880879 25.753418364563665 34.1300505038421 20.061806672785444 40 18.827491623367862 25.70384286672709 34.63001652835614 20.838648981548918 41 16.81882261063806 26.795173758291696 33.43599353413005 22.950010096940197 42 17.968533914712918 25.612731140973384 33.57974333673726 22.838991607576435 43 19.37234357159879 24.905658210439373 34.46234032717915 21.25965789078269 44 17.67624902978454 25.661540994055727 34.20431804500269 22.45789193115705 45 17.86153506030888 24.89982016918835 33.86666870838601 23.371976062116758 46 17.834163260345058 26.137197797622864 35.007670803381465 21.02096813865061 47 16.81652567637536 24.437370737631728 37.37370450514944 21.372399080843472 48 16.970898799947555 23.01681260174701 37.31407991991355 22.69820867839188 49 17.615380271823028 22.787789114637118 38.73980615788935 20.857024455650507 50 16.700243379326253 22.732471281143795 37.866301198903976 22.70098414062597 51 15.834203456694654 22.55809568836727 36.338552797426665 25.269148057511405 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 394.0 1 886.0 2 1378.0 3 48938.5 4 96499.0 5 64438.0 6 32377.0 7 29860.0 8 27343.0 9 26093.0 10 24843.0 11 23808.5 12 22774.0 13 21144.5 14 19515.0 15 17757.5 16 16000.0 17 14467.5 18 12935.0 19 11990.5 20 11046.0 21 10032.5 22 9019.0 23 8251.0 24 7483.0 25 8076.5 26 9130.5 27 9591.0 28 10295.5 29 11000.0 30 12181.5 31 13363.0 32 14337.0 33 15311.0 34 16056.0 35 16801.0 36 18059.0 37 19317.0 38 21091.5 39 22866.0 40 26614.5 41 30363.0 42 35313.0 43 40263.0 44 46871.5 45 53480.0 46 59157.0 47 64834.0 48 70401.0 49 75968.0 50 73792.0 51 71616.0 52 61933.5 53 52251.0 54 47492.5 55 42734.0 56 40725.5 57 38717.0 58 37778.5 59 36840.0 60 36167.5 61 35495.0 62 33322.5 63 31150.0 64 27631.5 65 24113.0 66 20497.0 67 16881.0 68 14260.0 69 11639.0 70 9740.5 71 7842.0 72 6435.0 73 5028.0 74 3975.5 75 2542.0 76 2161.0 77 1677.5 78 1194.0 79 832.0 80 470.0 81 351.0 82 232.0 83 143.5 84 55.0 85 54.0 86 53.0 87 42.5 88 32.0 89 21.0 90 10.0 91 5.5 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1044871.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.077897006300496 #Duplication Level Percentage of deduplicated Percentage of total 1 77.49390554956076 24.85841520834789 2 9.821847212437746 6.301284065843952 3 3.614446499595651 3.4783152764643797 4 1.7582496024320844 2.2560379863274083 5 1.0416566245383336 1.6707076958935647 6 0.6653835928435681 1.2806463816550901 7 0.466854523995184 1.048299793635007 8 0.3698721423807722 0.94917763910321 9 0.25657005670486616 0.7407205068491438 >10 3.642088381019809 29.61023917691658 >50 0.7779439054378562 15.771610736999625 >100 0.08203322252626867 4.646716039391024 >500 0.0060991243513904055 1.3483996944682133 >1k 0.0027446059581256827 1.3446823998955353 >5k 0.0 0.0 >10k+ 3.049562175695203E-4 4.694747398209408 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 47992 4.593102880642682 No Hit GCTGTCTCTTATACACATCTGACGCAAACACCGTCGTATGCCGTCTTCTGC 2825 0.2703683038384643 No Hit CCTGTCTCTTATACACATCTGACGCAAACACCGTCGTATGCCGTCTTCTGC 2632 0.2518971241425975 No Hit CTGTCTCTTATACACATCTGACGCAAACACCGTCGTATGCCGTCTTCTGCT 1591 0.1522676004980519 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 1413 0.1352320047163717 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA 1132 0.10833873272394393 No Hit TATGAAAACTATGCCCTCGTGTACTCCTGCACCACCTTCTTCTGGCTCTTC 1078 0.10317063063287238 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.16231668789735768 0.0 2 0.0 0.0 0.0 0.9133184862054742 0.0 3 0.0 0.0 0.0 1.3015003766015134 0.0 4 0.0 0.0 0.0 1.7093976194190479 0.0 5 0.0 0.0 0.0 2.7636904459976397 0.0 6 0.0 0.0 0.0 3.3184957760335965 0.0 7 0.0 0.0 0.0 3.9185698521635683 0.0 8 0.0 0.0 0.0 4.7844183636066075 0.0 9 0.0 0.0 0.0 5.144749926067428 0.0 10 0.0 0.0 0.0 5.966191041764964 0.0 11 0.0 0.0 0.0 7.036466702588166 0.0 12 0.0 0.0 0.0 7.981272329311465 0.0 13 0.0 0.0 0.0 8.324951118367721 0.0 14 0.0 0.0 0.0 8.467552453843584 0.0 15 0.0 0.0 0.0 8.739356341596235 0.0 16 0.0 0.0 0.0 9.306986221265591 0.0 17 0.0 0.0 0.0 9.945916768672879 0.0 18 0.0 0.0 0.0 10.725438834076169 0.0 19 9.57055942791024E-5 0.0 0.0 11.171714020199623 0.0 20 9.57055942791024E-5 0.0 0.0 11.596646858798838 0.0 21 9.57055942791024E-5 0.0 0.0 12.114892651820178 0.0 22 9.57055942791024E-5 0.0 0.0 12.613710209202859 0.0 23 9.57055942791024E-5 0.0 0.0 13.12851060083015 0.0 24 9.57055942791024E-5 0.0 0.0 13.567990689759789 0.0 25 9.57055942791024E-5 0.0 0.0 13.933968882283077 0.0 26 9.57055942791024E-5 0.0 0.0 14.288845225869988 0.0 27 1.914111885582048E-4 0.0 0.0 14.61797676459582 0.0 28 1.914111885582048E-4 0.0 0.0 14.972374580211337 0.0 29 1.914111885582048E-4 0.0 0.0 15.30485581473694 0.0 30 1.914111885582048E-4 0.0 0.0 15.690166537304606 0.0 31 2.871167828373072E-4 0.0 0.0 16.06724657876427 0.0 32 2.871167828373072E-4 0.0 0.0 16.42642967409374 0.0 33 2.871167828373072E-4 0.0 0.0 16.806476588976054 0.0 34 2.871167828373072E-4 0.0 0.0 17.152835134672127 0.0 35 2.871167828373072E-4 0.0 0.0 17.528479592217604 0.0 36 3.828223771164096E-4 0.0 0.0 17.887949804329914 0.0 37 4.7852797139551196E-4 0.0 0.0 18.243687498265338 0.0 38 5.742335656746144E-4 0.0 0.0 18.630529510341468 0.0 39 5.742335656746144E-4 0.0 0.0 18.973251243454932 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACTACGC 30 2.1653104E-6 45.000004 26 AACGAGT 30 2.1653104E-6 45.000004 29 CGGCCTA 20 7.032993E-4 45.0 45 GCTATCG 25 3.8905615E-5 45.0 1 TAAACCG 20 7.032993E-4 45.0 25 CGATTCG 25 3.8905615E-5 45.0 10 CGGATAG 20 7.032993E-4 45.0 1 TATTACG 25 3.8905615E-5 45.0 1 AATTACG 25 3.8905615E-5 45.0 1 GCTCGAT 20 7.032993E-4 45.0 22 TATCGAG 20 7.032993E-4 45.0 41 TAGTCCG 20 7.032993E-4 45.0 1 TGCGTAG 25 3.8905615E-5 45.0 1 CGTTTTT 28380 0.0 44.381603 1 CTCATGC 100 0.0 40.5 23 GCGTATG 95 0.0 40.26316 1 GTTTTTT 31560 0.0 40.18061 2 GTTTCGG 45 1.9279469E-8 40.0 2 TACTAGT 45 1.9279469E-8 40.0 40 ACCGTAG 45 1.9279469E-8 40.0 1 >>END_MODULE