SRR2934907.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934907.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1506296
Sequences flagged as poor quality	0
Sequence length	51
%GC	36

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	57621	3.8253437571367113	No Hit
CCTGTCTCTTATACACATCTGACGCGTTGCTAGTCGTATGCCGTCTTCTGC	3874	0.25718716640022943	No Hit
CGCTGTCTCTTATACACATCTGACGCGTTGCTAGTCGTATGCCGTCTTCTG	3207	0.2129063610339535	No Hit
GCTGTCTCTTATACACATCTGACGCGTTGCTAGTCGTATGCCGTCTTCTGC	3055	0.2028153828995098	No Hit
CTGTCTCTTATACACATCTGACGCGTTGCTAGTCGTATGCCGTCTTCTGCT	2365	0.1570076532102588	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA	1658	0.11007132728228713	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGTTGCTAGTCGTATGCC	1595	0.1058888823976164	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCGTTGCTAGTCGTATGCCGTCT	1537	0.10203837758315762	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CAGTACG	20	7.0339843E-4	45.000004	1
CGCGAGT	25	3.891385E-5	45.0	39
CGTTTTT	43810	0.0	44.542915	1
GTTACGG	90	0.0	42.5	2
TGCGTCG	45	1.9290383E-8	40.0	1
GTTTTTT	49650	0.0	39.380665	2
ACGATAG	35	6.24958E-6	38.57143	1
CGATATC	35	6.24958E-6	38.57143	11
TAGTGCG	90	0.0	37.5	1
GTTAACG	60	1.5643309E-10	37.499996	1
AGTTACG	60	1.5643309E-10	37.499996	1
TTAGGCG	85	0.0	37.058823	1
CCGTAGG	85	0.0	37.058823	2
GCCCTAC	140	0.0	36.964287	26
ATCGGGC	80	0.0	36.562504	4
AACGTCG	25	0.0021073162	36.0	1
CTCGTAG	25	0.0021073162	36.0	1
GGTCGAT	25	0.0021073162	36.0	33
TAGCGCG	50	4.8807124E-8	36.0	1
GCACCGT	25	0.0021073162	36.0	33