SRR2934905.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934905.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1427771
Sequences flagged as poor quality	0
Sequence length	51
%GC	37

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	54644	3.827224393827862	No Hit
GCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTCTGC	4886	0.34221174123861603	No Hit
CCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTCTGC	4841	0.33905997530416293	No Hit
CTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTCTGCT	2983	0.2089270618327449	No Hit
TCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTCTGC	2301	0.16116029811503385	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCC	1621	0.11353361288329851	No Hit
CGCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTCTG	1615	0.11311337742537145	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AACGTTC	25	3.8912818E-5	45.0	36
TCGTTGA	40	6.8175723E-9	45.0	24
GTCGATT	25	3.8912818E-5	45.0	14
CGGCCTA	20	7.0338626E-4	45.0	11
TAGGTCG	20	7.0338626E-4	45.0	1
TTCGTCG	20	7.0338626E-4	45.0	10
CCGCTAT	20	7.0338626E-4	45.0	41
TAGTTCG	20	7.0338626E-4	45.0	1
ATTCCGC	20	7.0338626E-4	45.0	42
GTTCGTC	25	3.8912818E-5	45.0	9
TCGTCGA	20	7.0338626E-4	45.0	11
ACCCGCG	20	7.0338626E-4	45.0	32
TATCGCG	25	3.8912818E-5	45.0	1
TAGTCCG	35	1.2122109E-7	45.0	1
TAATCGT	40	6.8175723E-9	45.0	21
CGTTTTT	38770	0.0	44.622776	1
CTTGACG	50	1.0822987E-9	40.5	1
TCGAGCG	50	1.0822987E-9	40.5	1
CTAGCGG	100	0.0	40.5	2
GTTTTTT	43725	0.0	39.622643	2