SRR2934904.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934904.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1389803
Sequences flagged as poor quality	0
Sequence length	51
%GC	36

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	53240	3.830758747822533	No Hit
CCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTGC	4777	0.34371777870676634	No Hit
GCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTGC	4132	0.29730832355376985	No Hit
CTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTGCT	2392	0.17211072360615137	No Hit
CGCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTG	1670	0.1201609148922545	No Hit
TCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTGC	1637	0.11778647765186864	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA	1501	0.10800091811573294	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTATACG	20	7.033798E-4	45.0	1
GGCGTAT	20	7.033798E-4	45.0	37
TAGCGCG	40	6.8175723E-9	45.0	1
ATCGTCA	20	7.033798E-4	45.0	10
CGCCTAC	20	7.033798E-4	45.0	19
ACGATGC	20	7.033798E-4	45.0	11
TGATTCG	45	3.8562575E-10	45.0	1
ATGTTCG	20	7.033798E-4	45.0	40
TCGGTAA	20	7.033798E-4	45.0	37
ACGCGAG	25	3.8912294E-5	44.999996	1
GATCGTC	25	3.8912294E-5	44.999996	9
TCGATCA	25	3.8912294E-5	44.999996	17
AACGCGT	25	3.8912294E-5	44.999996	43
TAGGACG	30	2.1658307E-6	44.999996	1
TATCGTG	30	2.1658307E-6	44.999996	1
CGGAGTA	25	3.8912294E-5	44.999996	19
CGTTTTT	37750	0.0	44.46954	1
TCGTTGA	70	0.0	41.785717	24
CTAACGG	60	3.6379788E-12	41.249996	2
TACGGGT	55	6.184564E-11	40.909092	4