##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934903.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1441627 Sequences flagged as poor quality 0 Sequence length 51 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.57574601474584 34.0 31.0 34.0 31.0 34.0 2 32.73061062258129 34.0 31.0 34.0 31.0 34.0 3 32.78574901829669 34.0 31.0 34.0 31.0 34.0 4 36.19388371610687 37.0 37.0 37.0 35.0 37.0 5 36.07787867458087 37.0 35.0 37.0 35.0 37.0 6 36.05835351307932 37.0 35.0 37.0 35.0 37.0 7 36.20107350930581 37.0 37.0 37.0 35.0 37.0 8 36.18334839733163 37.0 37.0 37.0 35.0 37.0 9 37.95443412200243 39.0 39.0 39.0 35.0 39.0 10 37.60015316028348 39.0 38.0 39.0 35.0 39.0 11 37.514258542604985 39.0 37.0 39.0 35.0 39.0 12 37.468781453177556 39.0 37.0 39.0 35.0 39.0 13 37.42476174488963 39.0 37.0 39.0 35.0 39.0 14 38.726846819600354 40.0 38.0 41.0 35.0 41.0 15 38.76148546052481 40.0 38.0 41.0 35.0 41.0 16 38.856073034148224 40.0 38.0 41.0 35.0 41.0 17 38.848666125148874 40.0 38.0 41.0 35.0 41.0 18 38.37053481933954 39.0 38.0 41.0 35.0 41.0 19 37.87306494675807 38.0 37.0 41.0 35.0 41.0 20 37.30671317892909 38.0 35.0 41.0 34.0 41.0 21 37.26324493090099 38.0 35.0 41.0 34.0 41.0 22 37.084031445027044 38.0 35.0 41.0 34.0 41.0 23 36.948116260308666 38.0 35.0 40.0 33.0 41.0 24 36.73636106981903 38.0 35.0 40.0 33.0 41.0 25 36.578040644355305 37.0 35.0 40.0 33.0 41.0 26 36.6875724441898 38.0 35.0 40.0 33.0 41.0 27 36.72666577415656 38.0 35.0 40.0 33.0 41.0 28 36.65653806428431 38.0 35.0 40.0 33.0 41.0 29 36.49727842222711 38.0 35.0 40.0 33.0 41.0 30 36.211207892194025 38.0 35.0 40.0 32.0 41.0 31 35.720774513795874 38.0 35.0 40.0 30.0 41.0 32 34.991002527005946 38.0 35.0 40.0 23.0 41.0 33 34.049357427406676 38.0 34.0 40.0 16.0 41.0 34 33.28106923635587 38.0 33.0 40.0 12.0 41.0 35 32.82653557404238 38.0 33.0 41.0 10.0 41.0 36 32.60638986367486 38.0 32.0 40.0 9.0 41.0 37 32.39266675776744 38.0 31.0 40.0 8.0 41.0 38 32.243271664584526 37.0 31.0 40.0 8.0 41.0 39 32.16781594684339 37.0 31.0 40.0 8.0 41.0 40 32.02503144017142 37.0 30.0 40.0 8.0 41.0 41 31.909140159000906 37.0 30.0 40.0 8.0 41.0 42 31.77337411133393 37.0 29.0 40.0 7.0 41.0 43 31.631284652687555 37.0 29.0 40.0 7.0 41.0 44 31.51471635866975 36.0 28.0 40.0 7.0 41.0 45 31.47343522284197 36.0 27.0 40.0 7.0 41.0 46 31.423153839377314 36.0 27.0 40.0 7.0 41.0 47 31.399841984091584 36.0 27.0 40.0 7.0 41.0 48 31.360684837340035 36.0 27.0 40.0 7.0 41.0 49 31.23736445002764 36.0 27.0 40.0 7.0 41.0 50 31.14656634483122 35.0 27.0 40.0 7.0 41.0 51 30.613812726870403 35.0 24.0 40.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 3.0 9 14.0 10 14.0 11 14.0 12 19.0 13 26.0 14 42.0 15 70.0 16 146.0 17 289.0 18 546.0 19 964.0 20 1673.0 21 2804.0 22 4581.0 23 7831.0 24 14378.0 25 30644.0 26 56035.0 27 72687.0 28 68747.0 29 53564.0 30 40719.0 31 35336.0 32 35563.0 33 42750.0 34 73152.0 35 97029.0 36 103423.0 37 132378.0 38 240696.0 39 325275.0 40 214.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.845704193941987 15.412100356056039 17.51500214687988 36.22719330312209 2 50.327650633624366 18.855709555939228 17.657271957309344 13.159367853127058 3 23.456969105045896 18.529272828547192 45.147392494729914 12.866365571677003 4 21.216653128721923 19.27412569270692 45.31928161722831 14.189939561342843 5 19.4546855740077 21.80897000403017 43.85101000466833 14.885334417293794 6 19.68498092779894 25.014653582376024 43.52589123261426 11.774474257210777 7 58.36953664158621 4.688938262116345 32.908581762134034 4.032943334163415 8 58.30072549973051 5.294157226522533 31.97442889180072 4.430688381946232 9 53.56288415796874 6.550931690374834 33.76074393723203 6.125440214424397 10 29.697071433872978 20.100275591397775 38.768696757205575 11.433956217523674 11 24.290679905412425 18.507977444928542 42.85109809957777 14.350244550081262 12 23.034876566545993 15.934634964522724 45.657649308732424 15.37283916019886 13 18.86500460937538 17.996818872010582 46.780616622746386 16.357559895867656 14 14.573672662901012 21.321603993265942 46.33584137921945 17.76888196461359 15 14.033588438618311 19.245963068116787 50.96567974933877 15.754768743926133 16 15.710513190998782 18.39844841973687 48.9154961720334 16.97554221723095 17 15.632337629636513 18.856541948784255 46.4208841815532 19.090236240026027 18 16.51529834000057 19.391423717785532 46.80101024744958 17.29226769476432 19 18.252918403997707 20.471245335998837 44.77128966091784 16.504546599085618 20 20.38252613193288 19.436164833205815 45.428325079927056 14.752983954934251 21 18.504162311055495 19.951069173926403 45.46717007936172 16.07759843565638 22 17.19078513374125 19.62442434832311 44.87887643613778 18.30591408179786 23 17.333332408452396 20.014955324782346 45.62816872880433 17.02354353796093 24 18.054184612247134 18.108082048962736 45.9041069569313 17.93362638185883 25 16.534374009365806 20.49885303202562 44.401707237725155 18.56506572088342 26 16.023909097152035 21.514025472608377 45.04771345153774 17.41435197870184 27 17.610033663353974 21.117529014093105 44.82130259768997 16.45113472486295 28 15.448725641237296 21.556269409493577 45.22438883289506 17.770616116374068 29 16.391826734654664 20.384953944397548 44.707680974343575 18.515538346604217 30 17.357471800958223 20.694673448818595 43.58339570499165 18.364459045231534 31 17.082504697817118 21.721430023161332 41.25803692633392 19.938028352687624 32 18.317567581628257 22.722521151449023 40.35426639484416 18.60564487207856 33 18.293220090911174 24.24496766500627 38.61449598266403 18.847316261418523 34 17.170738339390148 24.624330704128045 37.447619946074816 20.757311010406994 35 17.567650994327934 25.23773486484368 35.54241145594526 21.65220268488312 36 17.99626394344723 27.93704612913049 34.56920548796602 19.497484439456255 37 18.653646192808544 26.516845203370913 35.37516986016494 19.454338743655605 38 17.61627660969169 26.052092531563297 34.312759125626805 22.018871733118207 39 18.860010252305205 25.49640094143631 34.907920009822234 20.73566879643625 40 18.885745064430676 25.61120178797983 36.38652716687465 19.116525980714847 41 16.592641508517804 26.658074522744098 35.18704907718848 21.56223489154962 42 18.37278297368182 25.98994053246783 34.906463322343434 20.730813171506917 43 19.683316142108882 26.18853559207756 33.97494636268605 20.153201903127506 44 18.750203762831855 26.288769563833085 32.92696377079508 22.03406290253998 45 17.963869988561534 25.381530728822366 33.13957077662946 23.51502850598664 46 18.212755449225078 26.313463884902266 33.8287226862427 21.645057979629957 47 17.192935481924245 24.949033279759604 36.752571920475965 21.10545931784019 48 17.298233176820357 23.762873475593896 36.3783419705652 22.560551377020545 49 17.044769555509156 23.69489472658323 37.28349982346335 21.976835894444264 50 16.493031831396053 22.95649290697247 36.925570900101064 23.62490436153041 51 15.867557974427504 23.10500566373965 35.56842373235241 25.459012629480444 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 366.0 1 854.0 2 1342.0 3 56792.0 4 112242.0 5 78148.0 6 44054.0 7 42400.0 8 40746.0 9 39289.0 10 37832.0 11 35383.5 12 32935.0 13 30283.0 14 27631.0 15 25334.5 16 23038.0 17 21127.5 18 19217.0 19 17754.0 20 16291.0 21 14952.0 22 13613.0 23 12699.5 24 11786.0 25 11736.0 26 12444.5 27 13203.0 28 14604.5 29 16006.0 30 17064.5 31 18123.0 32 20069.5 33 22016.0 34 24372.5 35 26729.0 36 28444.5 37 30160.0 38 32652.0 39 35144.0 40 39661.0 41 44178.0 42 49520.0 43 54862.0 44 60696.5 45 66531.0 46 79026.5 47 91522.0 48 97064.5 49 102607.0 50 101977.5 51 101348.0 52 88667.5 53 75987.0 54 68843.0 55 61699.0 56 57439.0 57 53179.0 58 53656.0 59 54133.0 60 53611.0 61 53089.0 62 48643.0 63 44197.0 64 36162.0 65 28127.0 66 23568.0 67 19009.0 68 15300.5 69 11592.0 70 10358.0 71 9124.0 72 7799.5 73 6475.0 74 5408.0 75 3555.5 76 2770.0 77 2033.5 78 1297.0 79 1028.5 80 760.0 81 573.5 82 387.0 83 268.0 84 149.0 85 97.0 86 45.0 87 37.5 88 30.0 89 24.0 90 18.0 91 12.0 92 6.0 93 5.0 94 4.0 95 2.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1441627.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.345874756011234 #Duplication Level Percentage of deduplicated Percentage of total 1 77.43299866751579 25.046380768818505 2 9.649448975596416 6.242397360583251 3 3.689256725488793 3.5799670795629783 4 1.853199721229511 2.3977346432305877 5 1.0606078980141975 1.715314511720178 6 0.7128594682577674 1.3834837847341503 7 0.5088987172782505 1.1522541920803944 8 0.38053754369034154 0.9847055782534352 9 0.2929878780930027 0.8529254288843177 >10 3.5496776142521362 28.7588205024632 >50 0.7688970434818594 15.89788888222535 >100 0.09298974471662846 5.334599454175886 >500 0.004147429866309026 0.8753787149955919 >1k 0.003274286736559757 1.8952182180925696 >5k 0.0 0.0 >10k+ 2.1828578243731711E-4 3.8829308801796727 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 54994 3.814717676625091 No Hit GCTGTCTCTTATACACATCTGACGCAGCCACTTTCGTATGCCGTCTTCTGC 4350 0.30174240632285604 TruSeq Adapter, Index 13 (95% over 22bp) CCTGTCTCTTATACACATCTGACGCAGCCACTTTCGTATGCCGTCTTCTGC 3302 0.2290467645236944 TruSeq Adapter, Index 13 (95% over 22bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCAGCCACTTTCGTATGC 2088 0.1448363550349709 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGCCACTTTCGTATGCCG 2043 0.14171488186611378 No Hit CTGTCTCTTATACACATCTGACGCAGCCACTTTCGTATGCCGTCTTCTGCT 1919 0.13311348913415189 TruSeq Adapter, Index 16 (95% over 22bp) GAATCTGTCTCTTATACACATCTGACGCAGCCACTTTCGTATGCCGTCTTC 1890 0.13110187309199953 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 1559 0.10814170378329485 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.080982112571421E-4 0.0 0.0 0.14199234614778997 0.0 2 2.080982112571421E-4 0.0 0.0 0.880186067547292 0.0 3 2.080982112571421E-4 0.0 0.0 1.2528205978384146 0.0 4 2.080982112571421E-4 0.0 0.0 1.6759536273946034 0.0 5 2.080982112571421E-4 0.0 0.0 2.8225054053510372 0.0 6 2.080982112571421E-4 0.0 0.0 3.3924170399139304 0.0 7 2.080982112571421E-4 0.0 0.0 4.0167810397557755 0.0 8 2.080982112571421E-4 0.0 0.0 4.9265864193720015 0.0 9 2.080982112571421E-4 0.0 0.0 5.291382583705771 0.0 10 2.080982112571421E-4 0.0 0.0 6.196956633026435 0.0 11 2.080982112571421E-4 0.0 0.0 7.287876822506792 0.0 12 2.080982112571421E-4 0.0 0.0 8.33585941439776 0.0 13 2.080982112571421E-4 0.0 0.0 8.687545391422331 0.0 14 2.080982112571421E-4 0.0 0.0 8.84126060347094 0.0 15 2.080982112571421E-4 0.0 0.0 9.15132693824408 0.0 16 2.080982112571421E-4 0.0 0.0 9.705769939103527 0.0 17 2.080982112571421E-4 0.0 0.0 10.36377648309861 0.0 18 4.161964225142842E-4 0.0 0.0 11.075680463809293 0.0 19 4.161964225142842E-4 0.0 0.0 11.550075019405158 0.0 20 4.161964225142842E-4 0.0 0.0 11.983474227383367 0.0 21 4.161964225142842E-4 0.0 0.0 12.521477469553497 0.0 22 4.161964225142842E-4 0.0 0.0 13.099435568285001 0.0 23 4.8556249293333156E-4 0.0 0.0 13.643681756792846 0.0 24 4.8556249293333156E-4 0.0 0.0 14.074930616588063 0.0 25 4.8556249293333156E-4 0.0 0.0 14.469484825131605 0.0 26 4.8556249293333156E-4 0.0 0.0 14.82228065928288 0.0 27 4.8556249293333156E-4 0.0 0.0 15.186660627194135 0.0 28 4.8556249293333156E-4 0.0 0.0 15.531063166824707 0.0 29 4.8556249293333156E-4 0.0 0.0 15.902241009637029 0.0 30 4.8556249293333156E-4 0.0 0.0 16.313304342940302 0.0 31 4.8556249293333156E-4 0.0 0.0 16.720830006652207 0.0 32 5.54928563352379E-4 0.0 0.0 17.118575054435023 0.0 33 5.54928563352379E-4 0.0 0.0 17.470052933248336 0.0 34 5.54928563352379E-4 0.0 0.0 17.813623080033878 0.0 35 5.54928563352379E-4 0.0 0.0 18.19735618159205 0.0 36 6.242946337714264E-4 0.0 0.0 18.612373380909208 0.0 37 6.242946337714264E-4 0.0 0.0 19.006303294818977 0.0 38 6.242946337714264E-4 0.0 0.0 19.3862212625041 0.0 39 6.936607041904736E-4 0.0 0.0 19.755040658922177 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACGAAT 230 0.0 45.000004 12 CGAATAT 230 0.0 45.000004 14 AACGTCG 20 7.033885E-4 45.0 2 CTATGCG 35 1.2122109E-7 45.0 1 TCCGCAC 25 3.8913015E-5 45.0 33 AGATTCG 20 7.033885E-4 45.0 1 CGTACAT 25 3.8913015E-5 45.0 35 AATACGG 35 1.2122109E-7 45.0 2 TCGCGAT 20 7.033885E-4 45.0 33 CGTTTTT 38095 0.0 44.486153 1 GCTACGA 255 0.0 42.35294 10 CGGTCTA 70 0.0 41.785713 31 GTTTTTT 41750 0.0 40.78563 2 ATAGGGT 145 0.0 40.34483 4 TATACGG 45 1.9288564E-8 40.0 2 TCGACAG 45 1.9288564E-8 40.0 1 CCTATGC 220 0.0 39.886364 35 TCACGAC 80 0.0 39.375 25 TCGATAG 40 3.4590448E-7 39.375 1 CGTATAG 75 0.0 39.0 1 >>END_MODULE