SRR2934902.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934902.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	534972
Sequences flagged as poor quality	0
Sequence length	51
%GC	37

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	23125	4.322656139012883	No Hit
CCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTTCTGC	3971	0.7422818390495203	No Hit
GCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTTCTGC	3263	0.6099384640691475	No Hit
CTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTTCTGCT	2155	0.40282482073828163	No Hit
TCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTTCTGC	1577	0.2947817829718191	No Hit
CGCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTTCTG	1311	0.24505955451874115	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCC	1270	0.23739560201281562	No Hit
ACTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTTCTGC	1016	0.1899164816102525	No Hit
ACCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTTCTG	602	0.11252925386749213	No Hit
GCCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTTCTG	572	0.10692148374120515	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	535	0.10000523391878453	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTAGACG	30	2.1633168E-6	45.000004	1
CGGGTCG	25	3.8879993E-5	45.000004	6
CGGAACG	25	3.8879993E-5	45.000004	1
TCGTTAG	25	3.8879993E-5	45.000004	1
ATCTAAT	30	2.1633168E-6	45.000004	19
CAGCATA	30	2.1633168E-6	45.000004	26
GACGTCC	25	3.8879993E-5	45.000004	19
CAACAGG	130	0.0	45.000004	2
CCGCTAC	25	3.8879993E-5	45.000004	20
CCAGACG	25	3.8879993E-5	45.000004	16
GCCGCTA	25	3.8879993E-5	45.000004	19
TTGAGTA	25	3.8879993E-5	45.000004	23
ATCGTAG	30	2.1633168E-6	45.000004	1
ATGTACG	30	2.1633168E-6	45.000004	1
CTAACCG	30	2.1633168E-6	45.000004	1
TACGCGG	25	3.8879993E-5	45.000004	2
TAACCGG	30	2.1633168E-6	45.000004	2
TGACCGG	25	3.8879993E-5	45.000004	2
TATCTAG	25	3.8879993E-5	45.000004	36
AGCGATT	25	3.8879993E-5	45.000004	22