##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934900.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 785702 Sequences flagged as poor quality 0 Sequence length 51 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.33423486258149 33.0 31.0 34.0 30.0 34.0 2 32.51942848560905 34.0 31.0 34.0 31.0 34.0 3 32.60815550934069 34.0 31.0 34.0 31.0 34.0 4 36.04292212569142 37.0 35.0 37.0 35.0 37.0 5 35.90894893992888 37.0 35.0 37.0 35.0 37.0 6 35.885520209952375 37.0 35.0 37.0 35.0 37.0 7 36.09545476529269 37.0 35.0 37.0 35.0 37.0 8 36.10855387920611 37.0 36.0 37.0 35.0 37.0 9 37.90093317822788 39.0 38.0 39.0 35.0 39.0 10 37.3907053819387 39.0 37.0 39.0 34.0 39.0 11 37.26585779341277 39.0 37.0 39.0 34.0 39.0 12 37.27988601276311 39.0 37.0 39.0 34.0 39.0 13 37.1887369511596 39.0 37.0 39.0 33.0 39.0 14 38.361063100259386 40.0 38.0 41.0 34.0 41.0 15 38.43863704050645 40.0 38.0 41.0 34.0 41.0 16 38.55268918750366 40.0 38.0 41.0 34.0 41.0 17 38.574795533166515 40.0 38.0 41.0 34.0 41.0 18 38.14958852083869 39.0 38.0 40.0 34.0 41.0 19 37.723728589210666 38.0 37.0 40.0 34.0 41.0 20 37.21136894140527 38.0 35.0 40.0 34.0 41.0 21 37.13212515686609 38.0 35.0 40.0 34.0 41.0 22 36.924132813713086 38.0 35.0 40.0 33.0 41.0 23 36.805152589658675 38.0 35.0 40.0 33.0 41.0 24 36.574786623936305 37.0 35.0 40.0 33.0 41.0 25 36.4245655477522 37.0 35.0 40.0 33.0 41.0 26 36.63487301801447 37.0 35.0 40.0 33.0 41.0 27 36.715454459833374 38.0 35.0 40.0 33.0 41.0 28 36.717036484570485 38.0 35.0 40.0 33.0 41.0 29 36.64824831806461 38.0 35.0 40.0 33.0 41.0 30 36.36748029151001 38.0 35.0 40.0 33.0 41.0 31 35.92587520459411 38.0 35.0 40.0 31.0 41.0 32 35.31108868247758 38.0 35.0 40.0 27.0 41.0 33 34.378727558285455 38.0 35.0 40.0 18.0 41.0 34 33.73561732056174 38.0 34.0 40.0 15.0 41.0 35 33.329048417847986 38.0 34.0 40.0 10.0 41.0 36 33.08137309056105 38.0 33.0 40.0 10.0 41.0 37 32.90229119946239 38.0 33.0 40.0 10.0 41.0 38 32.77588322290131 38.0 33.0 40.0 10.0 41.0 39 32.7197678000056 38.0 33.0 40.0 10.0 41.0 40 32.62909729133946 38.0 32.0 40.0 10.0 41.0 41 32.49918416906155 37.0 32.0 40.0 8.0 41.0 42 32.32441816362947 37.0 31.0 40.0 8.0 41.0 43 32.199365662808546 37.0 31.0 40.0 8.0 41.0 44 32.079197965640915 37.0 31.0 40.0 8.0 41.0 45 32.07490117118195 37.0 31.0 40.0 8.0 41.0 46 32.00354841912073 37.0 31.0 40.0 8.0 41.0 47 31.95868535398917 37.0 30.0 40.0 8.0 41.0 48 31.926318120610613 37.0 30.0 40.0 8.0 41.0 49 31.83185482536636 37.0 30.0 40.0 8.0 41.0 50 31.756004184792708 37.0 30.0 40.0 8.0 41.0 51 31.17835006147369 35.0 28.0 40.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 2.0 9 4.0 10 7.0 11 5.0 12 5.0 13 10.0 14 16.0 15 40.0 16 73.0 17 127.0 18 261.0 19 532.0 20 908.0 21 1589.0 22 2397.0 23 4339.0 24 7961.0 25 16486.0 26 28580.0 27 35320.0 28 31373.0 29 24266.0 30 19895.0 31 18567.0 32 19747.0 33 24850.0 34 43084.0 35 61793.0 36 63481.0 37 80325.0 38 148510.0 39 151076.0 40 72.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.83039625710511 16.875100228839944 20.159297036280933 34.13520647777402 2 45.834553049374954 19.98887618970042 19.957821158658117 14.21874960226651 3 22.54124337216909 18.392978508391224 45.729933231683255 13.335844887756426 4 21.067783968985694 19.943311840876056 44.4050034236899 14.583900766448348 5 18.51999867634294 22.232602182506852 44.00408806392245 15.243311077227753 6 19.779509279599644 24.3358168873186 43.02980010232888 12.85487373075288 7 59.21328951689063 4.670727578649412 31.41534576722472 4.700637137235237 8 58.93404878694467 3.5421826595834047 30.963647795220073 6.560120758251857 9 54.0895912190627 5.573741698506558 33.54872458005707 6.787942502373673 10 27.725269886038216 20.358991067860334 39.7322394495623 12.183499596539146 11 19.768690928621794 19.49390481378436 44.76875456598049 15.96864969161336 12 18.664200931141835 16.179162074170613 49.3046982189176 15.851938775769947 13 16.082306014239496 21.553464290532542 48.719107244222364 13.645122451005598 14 12.390830111161739 24.84937037197309 45.76926111935569 16.99053839750949 15 11.441869818328069 21.56364626792346 52.135160658875755 14.859323254872713 16 12.802691096624418 21.306805888237527 48.27708215073908 17.61342086439897 17 12.549159859590532 20.926763582121467 44.704862657852466 21.819213900435532 18 13.337117634930292 20.108514424043722 49.490264756867106 17.06410318415888 19 14.65415641044569 21.194804136937414 45.82806203878824 18.322977413828653 20 15.797719746163303 22.14427352864063 46.10488454910386 15.953122176092208 21 15.259602241053225 22.30489422198238 47.16444657134639 15.271056965618007 22 13.783851892956871 21.41868036482025 44.27314681647749 20.524320925745386 23 12.972475569617997 21.433698781471854 45.55314864923343 20.04067699967672 24 16.305927692687558 19.420085477700198 46.220195443056014 18.053791386556224 25 12.363466046923644 21.765885793850597 45.09483239192467 20.77581576730109 26 11.90744073452785 22.194419767290906 45.56320335190696 20.334936146274288 27 14.134748288791425 21.667502437310837 46.79484079205602 17.402908481841717 28 11.069463995255198 20.340918057991452 46.883042171204856 21.70657577554849 29 11.691200989688202 19.019170117932756 45.407928196695444 23.881700695683605 30 14.031019394121437 22.084072587316818 44.340602416692334 19.54430560186941 31 16.44656625539963 22.234765852702424 39.24286816121125 22.0757997306867 32 16.51567642694049 21.8534507994125 39.296068993078805 22.334803780568205 33 15.83666580968357 23.19263537575315 40.142064039546796 20.828634775016482 34 16.4204749383354 21.281732768912388 38.7676243664901 23.53016792626212 35 16.6550422424787 21.588210288379052 36.18967496582674 25.567072503315508 36 19.005933547324556 22.483969749345174 37.86639209267636 20.643704610653913 37 17.64969415885412 22.789174521637975 38.46585601156672 21.09527530794118 38 16.54851330402621 26.007697574907535 34.44639316178398 22.997395959282272 39 18.516180434821344 23.92471955016024 36.883958549170046 20.675141465848377 40 21.718157774830658 22.611244466731662 35.79283239701566 19.877765361422014 41 18.46921606410573 23.43623918483089 34.3557735630048 23.73877118805858 42 18.726056443791666 21.984925582472744 36.43989706020857 22.84912091352701 43 19.296374452400528 21.93147020117042 36.14283786982851 22.629317476600544 44 16.29689118775312 23.643315150018708 34.33617325652729 25.723620405700885 45 17.357216858299967 22.935540446632437 32.84145897554034 26.865783719527254 46 20.453938007030654 23.072360767822914 35.07309387019506 21.40060735495137 47 16.691824635803396 22.354658636480497 38.73147834675233 22.222038380963774 48 17.23414220658723 20.30260836805812 37.39623928665066 25.06701013870399 49 17.779005271718795 18.959351000761103 40.47908749118623 22.78255623633388 50 17.88107959506276 19.281228761031535 38.160905788708696 24.676785855197007 51 16.508294493332077 19.863256043639954 34.65028725903714 28.978162203990827 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 759.0 1 788.0 2 817.0 3 26625.5 4 52434.0 5 34927.0 6 17420.0 7 17185.5 8 16951.0 9 17379.5 10 17808.0 11 17411.0 12 17014.0 13 16075.5 14 15137.0 15 14062.5 16 12988.0 17 11893.0 18 10798.0 19 9901.0 20 9004.0 21 8418.0 22 7832.0 23 7278.0 24 6724.0 25 7366.0 26 8090.0 27 8172.0 28 8402.5 29 8633.0 30 10170.0 31 11707.0 32 12749.0 33 13791.0 34 13988.0 35 14185.0 36 14594.5 37 15004.0 38 17145.0 39 19286.0 40 21761.5 41 24237.0 42 28272.5 43 32308.0 44 37190.0 45 42072.0 46 45874.0 47 49676.0 48 58386.0 49 67096.0 50 77103.5 51 87111.0 52 84205.0 53 81299.0 54 63016.5 55 44734.0 56 35028.5 57 25323.0 58 20563.0 59 15803.0 60 13185.5 61 10568.0 62 9318.5 63 8069.0 64 6616.5 65 5164.0 66 4271.5 67 3379.0 68 2635.5 69 1892.0 70 1442.0 71 992.0 72 862.0 73 732.0 74 538.0 75 249.5 76 155.0 77 112.0 78 69.0 79 117.0 80 165.0 81 94.5 82 24.0 83 16.0 84 8.0 85 6.0 86 4.0 87 2.5 88 1.0 89 1.0 90 1.0 91 1.5 92 2.0 93 1.5 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 785702.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.606280284833765 #Duplication Level Percentage of deduplicated Percentage of total 1 74.2219839478958 25.685467797973143 2 10.746501833297812 7.4379290904916795 3 4.623712264776695 4.8002844777385745 4 2.5126235647032797 3.4781022132159936 5 1.5829887552149913 2.7390676275355053 6 1.002027263516894 2.0805861800586376 7 0.7111489159593875 1.7227153096962378 8 0.4889565532632848 1.3536774023468388 9 0.3837324222658223 1.195159658337831 >10 3.134328231456472 25.126566371958088 >50 0.5152351918255366 11.528839555082811 >100 0.06814883980479683 4.470681002755607 >500 0.005242218446522831 1.1935724389548679 >1k 0.0022466650485097844 1.5216720389368161 >5k 7.488883495032615E-4 1.5709128951742333 >10k+ 3.7444417475163074E-4 4.094765939743114 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 31600 4.021881069413085 No Hit CCTGTCTCTTATACACATCTGACGCCTCCAGGTTCGTATGCCGTCTTCTGC 6336 0.806412609360801 No Hit GCTGTCTCTTATACACATCTGACGCCTCCAGGTTCGTATGCCGTCTTCTGC 5787 0.7365387895156178 No Hit CTGTCTCTTATACACATCTGACGCCTCCAGGTTCGTATGCCGTCTTCTGCT 3225 0.41046096357143036 Illumina Single End Adapter 2 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCCTCCAGGTTCGTATGCCGTCTTCTGC 2622 0.33371430898737686 No Hit CGCTGTCTCTTATACACATCTGACGCCTCCAGGTTCGTATGCCGTCTTCTG 1807 0.2299854143173875 No Hit ACTGTCTCTTATACACATCTGACGCCTCCAGGTTCGTATGCCGTCTTCTGC 1626 0.20694869047043282 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCTCCAGGTTCGTATGCC 1461 0.18594836210166196 No Hit GCCTGTCTCTTATACACATCTGACGCCTCCAGGTTCGTATGCCGTCTTCTG 1002 0.12752926682126303 No Hit CGTTCTGTCTCTTATACACATCTGACGCCTCCAGGTTCGTATGCCGTCTTC 877 0.11161992714795177 No Hit ACCTGTCTCTTATACACATCTGACGCCTCCAGGTTCGTATGCCGTCTTCTG 873 0.11111082827840581 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.2727471738649003E-4 0.0 0.0 0.4359159070487284 0.0 2 2.5454943477298006E-4 0.0 0.0 2.6726417903989046 0.0 3 2.5454943477298006E-4 0.0 0.0 3.676075662273992 0.0 4 2.5454943477298006E-4 0.0 0.0 4.725455707125603 0.0 5 2.5454943477298006E-4 0.0 0.0 7.202603531618858 0.0 6 2.5454943477298006E-4 0.0 0.0 8.43653191668088 0.0 7 2.5454943477298006E-4 0.0 0.0 9.743770538957518 0.0 8 2.5454943477298006E-4 0.0 0.0 11.72938340490415 0.0 9 2.5454943477298006E-4 0.0 0.0 12.468340414050111 0.0 10 2.5454943477298006E-4 0.0 0.0 14.075692819924093 0.0 11 2.5454943477298006E-4 0.0 0.0 16.361419469468068 0.0 12 2.5454943477298006E-4 0.0 0.0 18.145938281944044 0.0 13 3.8182415215947015E-4 0.0 0.0 18.814894196527437 0.0 14 3.8182415215947015E-4 0.0 0.0 19.052770643322788 0.0 15 3.8182415215947015E-4 0.0 0.0 19.504595890044826 0.0 16 3.8182415215947015E-4 0.0 0.0 20.556521429244167 0.0 17 3.8182415215947015E-4 0.0 0.0 21.947124991408955 0.0 18 3.8182415215947015E-4 0.0 0.0 23.6302058541279 0.0 19 3.8182415215947015E-4 0.0 0.0 24.477473647769767 0.0 20 3.8182415215947015E-4 0.0 0.0 25.252322127218715 0.0 21 3.8182415215947015E-4 0.0 0.0 26.19631870607431 0.0 22 3.8182415215947015E-4 0.0 0.0 27.127460538473873 0.0 23 3.8182415215947015E-4 0.0 0.0 28.039256613830688 0.0 24 3.8182415215947015E-4 0.0 0.0 28.72997650508717 0.0 25 3.8182415215947015E-4 0.0 0.0 29.361259103324162 0.0 26 3.8182415215947015E-4 0.0 0.0 29.946595528584627 0.0 27 3.8182415215947015E-4 0.0 0.0 30.507240658672117 0.0 28 3.8182415215947015E-4 0.0 0.0 31.056685613629593 0.0 29 3.8182415215947015E-4 0.0 0.0 31.615039798804126 0.0 30 5.090988695459601E-4 0.0 0.0 32.24721332006282 0.0 31 5.090988695459601E-4 0.0 0.0 32.86296840277866 0.0 32 5.090988695459601E-4 0.0 0.0 33.41724979699683 0.0 33 5.090988695459601E-4 0.0 0.0 33.97267666367147 0.0 34 5.090988695459601E-4 0.0 0.0 34.47808456641322 0.0 35 5.090988695459601E-4 0.0 0.0 35.0218021590883 0.0 36 5.090988695459601E-4 0.0 0.0 35.53446472072109 0.0 37 5.090988695459601E-4 0.0 0.0 36.05043642500592 0.0 38 5.090988695459601E-4 0.0 0.0 36.55660797605199 0.0 39 5.090988695459601E-4 0.0 0.0 37.02319708999086 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTAGCG 35 1.211265E-7 45.000004 1 AACGCCG 35 1.211265E-7 45.000004 13 ACTAACG 30 2.164621E-6 45.000004 24 CATCGTT 35 1.211265E-7 45.000004 36 TCGAGAG 30 2.164621E-6 45.000004 1 TCTGGTA 35 1.211265E-7 45.000004 43 GGCTATC 35 1.211265E-7 45.000004 8 CGAAGTA 30 2.164621E-6 45.000004 27 AGATGCG 35 1.211265E-7 45.000004 1 GTTTGCG 25 3.889675E-5 45.0 1 AGATCCG 20 7.031924E-4 45.0 27 GCAAGCG 40 6.8102963E-9 45.0 1 ACACGAC 20 7.031924E-4 45.0 10 GTCGAGC 20 7.031924E-4 45.0 20 TTTACGA 25 3.889675E-5 45.0 16 ACCGCGT 20 7.031924E-4 45.0 37 TAGGTCG 20 7.031924E-4 45.0 1 CATTGCG 25 3.889675E-5 45.0 1 GCCGGTT 20 7.031924E-4 45.0 39 TGTATCG 20 7.031924E-4 45.0 1 >>END_MODULE