##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934899.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1980316 Sequences flagged as poor quality 0 Sequence length 51 %GC 38 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.45630394341105 34.0 31.0 34.0 30.0 34.0 2 32.63804867505994 34.0 31.0 34.0 31.0 34.0 3 32.692777819297525 34.0 31.0 34.0 31.0 34.0 4 36.12663635500597 37.0 37.0 37.0 35.0 37.0 5 35.995127040330935 37.0 35.0 37.0 35.0 37.0 6 35.97209788740787 37.0 35.0 37.0 35.0 37.0 7 36.181421550904 37.0 36.0 37.0 35.0 37.0 8 36.20974379846449 37.0 37.0 37.0 35.0 37.0 9 38.0104756008637 39.0 39.0 39.0 35.0 39.0 10 37.38882430884768 39.0 37.0 39.0 34.0 39.0 11 37.348942290018364 39.0 37.0 39.0 34.0 39.0 12 37.438237634801716 39.0 37.0 39.0 35.0 39.0 13 37.45579947846707 39.0 37.0 39.0 35.0 39.0 14 38.74468014195714 40.0 38.0 41.0 35.0 41.0 15 38.76824658286859 40.0 38.0 41.0 35.0 41.0 16 38.84693806443012 40.0 38.0 41.0 35.0 41.0 17 38.85602600797044 40.0 38.0 41.0 35.0 41.0 18 38.36483621805813 39.0 38.0 41.0 35.0 41.0 19 37.8637338687361 38.0 37.0 40.0 35.0 41.0 20 37.31363933836822 38.0 35.0 40.0 34.0 41.0 21 37.256694891118386 38.0 35.0 40.0 34.0 41.0 22 37.07800472247863 38.0 35.0 40.0 34.0 41.0 23 36.94881978431725 38.0 35.0 40.0 33.0 41.0 24 36.72299976367408 38.0 35.0 40.0 33.0 41.0 25 36.585936789886055 38.0 35.0 40.0 33.0 41.0 26 36.74828613211225 38.0 35.0 40.0 33.0 41.0 27 36.79831451142141 38.0 35.0 40.0 33.0 41.0 28 36.75292074598195 38.0 35.0 40.0 33.0 41.0 29 36.652696842322136 38.0 35.0 40.0 33.0 41.0 30 36.34115666388597 38.0 35.0 40.0 32.0 41.0 31 35.84775662066054 38.0 35.0 40.0 30.0 41.0 32 35.12227391991985 38.0 35.0 40.0 23.0 41.0 33 34.12259306090543 38.0 34.0 40.0 16.0 41.0 34 33.29390662904304 38.0 33.0 40.0 12.0 41.0 35 32.74011723381521 38.0 32.0 40.0 9.0 41.0 36 32.48844224861083 38.0 31.0 40.0 8.0 41.0 37 32.26994025195979 38.0 31.0 40.0 8.0 41.0 38 32.160520846167984 38.0 30.0 40.0 7.0 41.0 39 32.122193629703546 38.0 30.0 40.0 7.0 41.0 40 32.027498641630935 38.0 30.0 40.0 7.0 41.0 41 31.905957938026052 38.0 29.0 40.0 7.0 41.0 42 31.77897870844855 38.0 29.0 40.0 7.0 41.0 43 31.681151392000064 38.0 28.0 40.0 7.0 41.0 44 31.577550754526044 38.0 27.0 40.0 7.0 41.0 45 31.52852322558622 37.0 26.0 40.0 7.0 41.0 46 31.44807343878452 37.0 26.0 40.0 7.0 41.0 47 31.40736225935659 37.0 26.0 40.0 7.0 41.0 48 31.34170354630271 37.0 26.0 40.0 7.0 41.0 49 31.215052042199325 37.0 26.0 40.0 7.0 41.0 50 31.126906008939986 37.0 25.0 40.0 7.0 41.0 51 30.513441289167993 35.0 24.0 40.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 7.0 9 9.0 10 14.0 11 14.0 12 18.0 13 25.0 14 30.0 15 73.0 16 121.0 17 304.0 18 598.0 19 1285.0 20 2325.0 21 3777.0 22 6276.0 23 10968.0 24 22290.0 25 48754.0 26 85966.0 27 101162.0 28 88780.0 29 69233.0 30 54531.0 31 49034.0 32 47925.0 33 56168.0 34 87946.0 35 113821.0 36 134734.0 37 191893.0 38 368293.0 39 433713.0 40 229.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 27.863128914779256 16.946234843328035 20.072655071210857 35.11798117068185 2 49.871333665940185 18.442359704208826 19.172950175628536 12.513356454222457 3 22.047440913470375 18.25582381801692 46.78768438976405 12.909050878748642 4 20.57398920172336 18.990605539721944 46.55029803324318 13.885107225311517 5 18.524922285130252 21.247467575881828 45.85217712728676 14.375433011701164 6 18.766348400962272 25.049689039527024 44.66665926044126 11.517303299069441 7 60.038902882166276 3.966134697694711 32.2369763209508 3.7579860991882104 8 61.406563396952805 3.0277491067082223 31.703223121966396 3.862464374372575 9 57.13618432613785 4.6447132679834935 33.24146247366582 4.977639932212838 10 26.985188222485707 19.8365816364661 40.71506769626666 12.463162444781538 11 19.77654071370428 20.098560027793543 45.06412107966607 15.060778178836104 12 18.412919958228887 17.162008487534315 48.57275303537415 15.852318518862646 13 16.997085313657013 18.177250499415244 50.186838868140235 14.638825318787507 14 14.932566317698793 20.782087303238473 48.229020014987505 16.05632636407523 15 13.954793073428684 20.22444902732695 50.5554164082904 15.265341490953968 16 15.81156744681152 19.67913201731441 48.90406379587905 15.605236739995032 17 16.050771695022412 19.685797620177787 46.61932742047229 17.644103264327512 18 16.582303026385688 20.029530640564435 48.01400382565207 15.37416250739781 19 15.928114502937914 21.485055920368264 46.90857418714993 15.67825538954389 20 17.238056956566528 20.824151297065722 46.99037931320052 14.947412433167232 21 16.30027732947671 20.811072576295906 48.23230231942781 14.656347774799578 22 15.848278759551507 19.646712948842506 46.57004235687638 17.934965934729608 23 14.852579083338217 20.62201184053454 47.05526794713571 17.470141128991536 24 15.636292389699422 19.31176640495759 47.800906521989425 17.251034683353566 25 14.952159150357822 21.19328430412116 45.80678033202782 18.0477762134932 26 14.919033124006473 21.58599940615538 47.17156251830516 16.32340495153299 27 15.454907196629225 20.849046313820622 47.437075699029855 16.2589707905203 28 14.054221649474124 20.38886723129036 48.52942661676217 17.027484502473342 29 16.68067116561195 18.87047319720691 47.19660902603423 17.25224661114691 30 16.302145718158112 19.713621462433267 47.471615641140104 16.512617178268517 31 15.676639485819436 20.917217252196114 45.38977617713537 18.016367084849087 32 17.08303119300152 21.229339155973086 43.461094088014235 18.226535563011158 33 16.170803043554667 21.299681464978317 43.1022624672022 19.427253024264814 34 16.44813252026444 21.797278818128017 40.91271292056419 20.841875741043346 35 17.819782297370722 22.380519068673888 38.41326333777034 21.386435296185052 36 17.321477986341574 24.316927197477575 38.25182445629889 20.10977035988196 37 17.4717065357246 24.34833632612169 38.76305599712369 19.416901141030017 38 17.41035269118666 24.780136099491195 37.007932067407424 20.801579141914726 39 18.343789577017 23.65460865841613 37.05418731151998 20.947414453046886 40 18.512096049317382 23.15100216329111 37.28031283896105 21.056588948430452 41 17.130700352872978 24.094386956425137 35.36506294954946 23.40984974115242 42 18.13432805673438 23.513318076509 36.12660807669079 22.22574579006583 43 18.704136107570708 23.41611136808469 36.7064145318222 21.173337992522406 44 18.26885204179535 23.43358332710537 36.31521433952965 21.982350291569627 45 19.058069520217984 22.316286895626757 36.005415297356585 22.62022828679867 46 18.85365769907429 22.71440517573963 36.84972499338489 21.58221213180119 47 16.481006061658846 22.638407203698804 39.028670171831166 21.851916562811187 48 16.886042429592045 21.501618933543938 38.34721327303319 23.265125363830823 49 18.028940835705008 20.619587984947856 39.225305456300916 22.12616572304622 50 17.222301895253082 20.128201761739035 39.092144890007454 23.55735145300043 51 16.848523164989828 20.265503081326415 36.86603552160362 26.01993823208013 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 519.0 1 844.5 2 1170.0 3 70802.0 4 140434.0 5 98322.0 6 56210.0 7 53374.0 8 50538.0 9 49395.5 10 48253.0 11 46703.0 12 45153.0 13 43162.5 14 41172.0 15 38241.5 16 35311.0 17 32534.0 18 29757.0 19 27317.5 20 24878.0 21 23139.5 22 21401.0 23 19919.0 24 18437.0 25 18287.5 26 18748.0 27 19358.0 28 20851.0 29 22344.0 30 24107.5 31 25871.0 32 29664.0 33 33457.0 34 37314.0 35 41171.0 36 45053.0 37 48935.0 38 53388.5 39 57842.0 40 64308.5 41 70775.0 42 76177.0 43 81579.0 44 89583.5 45 97588.0 46 106613.0 47 115638.0 48 135786.5 49 155935.0 50 169319.5 51 182704.0 52 176212.5 53 169721.0 54 137911.5 55 106102.0 56 86981.5 57 67861.0 58 57611.5 59 47362.0 60 42469.5 61 37577.0 62 32239.0 63 26901.0 64 22324.5 65 17748.0 66 13800.0 67 9852.0 68 7646.0 69 5440.0 70 4229.0 71 3018.0 72 2467.0 73 1916.0 74 1577.0 75 853.5 76 469.0 77 356.0 78 243.0 79 210.5 80 178.0 81 111.5 82 45.0 83 51.5 84 58.0 85 34.5 86 11.0 87 7.0 88 3.0 89 4.0 90 5.0 91 2.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1980316.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.69444261849589 #Duplication Level Percentage of deduplicated Percentage of total 1 76.59190736118391 28.870892570673 2 10.481630365784104 7.90198428742666 3 3.993041443446152 4.51546414689771 4 1.9860573284590906 2.9945329601857775 5 1.192821443608307 2.2481369730102383 6 0.7871683256739808 1.7803122769929212 7 0.5483143864758717 1.4467883624537368 8 0.41522379739143966 1.2521303683684468 9 0.3315857962183958 1.1249047591796335 >10 3.2379625000813963 27.597525366937166 >50 0.36386056188169436 8.594358974763466 >100 0.06442143487087557 4.791069370792403 >500 0.002593178262993566 0.6497696887498343 >1k 0.0030026274624136025 1.9432383755707634 >5k 2.729661329466912E-4 0.5717253009562081 >10k+ 1.364830664733456E-4 3.717166217042104 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 72253 3.648559118847699 No Hit CCTGTCTCTTATACACATCTGACGCGTTGTCCCTCGTATGCCGTCTTCTGC 5964 0.30116405664550505 TruSeq Adapter, Index 13 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCGTTGTCCCTCGTATGCCGTCTTCTGC 5149 0.2600090086632638 TruSeq Adapter, Index 13 (95% over 21bp) CGCTGTCTCTTATACACATCTGACGCGTTGTCCCTCGTATGCCGTCTTCTG 4405 0.2224392470696596 No Hit CTGTCTCTTATACACATCTGACGCGTTGTCCCTCGTATGCCGTCTTCTGCT 3689 0.18628340123495443 Illumina Single End Adapter 1 (95% over 21bp) CGTTCTGTCTCTTATACACATCTGACGCGTTGTCCCTCGTATGCCGTCTTC 2210 0.11159835097024919 No Hit TCTGTCTCTTATACACATCTGACGCGTTGTCCCTCGTATGCCGTCTTCTGC 2099 0.10599318492604212 TruSeq Adapter, Index 13 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 1985 0.10023652790766727 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.019879655570121E-4 0.0 0.0 0.19719075137503309 0.0 2 2.019879655570121E-4 0.0 0.0 0.9990324776449819 0.0 3 2.019879655570121E-4 0.0 0.0 1.5813132853544585 0.0 4 2.019879655570121E-4 0.0 0.0 2.108653366432428 0.0 5 2.019879655570121E-4 0.0 0.0 3.511207302268931 0.0 6 2.019879655570121E-4 0.0 0.0 4.4353527416836505 0.0 7 2.019879655570121E-4 0.0 0.0 5.27163341608107 0.0 8 2.019879655570121E-4 0.0 0.0 6.479016480198109 0.0 9 2.019879655570121E-4 0.0 0.0 6.947679057281767 0.0 10 2.019879655570121E-4 0.0 0.0 8.130470086592242 0.0 11 2.019879655570121E-4 0.0 0.0 9.866354662589202 0.0 12 2.5248495694626515E-4 0.0 0.0 11.158269690291853 0.0 13 2.5248495694626515E-4 0.0 0.0 11.688538596870398 0.0 14 2.5248495694626515E-4 0.0 0.0 11.891990975177698 0.0 15 2.5248495694626515E-4 0.0 0.0 12.263547837819823 0.0 16 2.5248495694626515E-4 0.0 0.0 13.104524732416442 0.0 17 2.5248495694626515E-4 0.0 0.0 14.141833929534478 0.0 18 2.5248495694626515E-4 0.0 0.0 15.257716445254191 0.0 19 2.5248495694626515E-4 0.0 0.0 15.934376129870182 0.0 20 2.5248495694626515E-4 0.0 0.0 16.55584260289772 0.0 21 2.5248495694626515E-4 0.0 0.0 17.400606771848533 0.0 22 3.0298194833551815E-4 0.0 0.0 18.25935860741417 0.0 23 3.0298194833551815E-4 0.0 0.0 19.149418577641143 0.0 24 3.0298194833551815E-4 0.0 0.0 19.80209219134724 0.0 25 4.039759311140242E-4 0.0 0.0 20.403410364810465 0.0 26 4.039759311140242E-4 0.0 0.0 20.96826971049065 0.0 27 4.5447292250327725E-4 0.0 0.0 21.546460261897597 0.0 28 4.5447292250327725E-4 0.0 0.0 22.116571294682263 0.0 29 4.5447292250327725E-4 0.0 0.0 22.697690671589786 0.0 30 4.5447292250327725E-4 0.0 0.0 23.3408708509147 0.0 31 5.049699138925303E-4 0.0 0.0 23.938351253032344 0.0 32 5.049699138925303E-4 0.0 0.0 24.527651142544926 0.0 33 5.049699138925303E-4 0.0 0.0 25.07382660141109 0.0 34 5.049699138925303E-4 0.0 0.0 25.597278414152086 0.0 35 5.049699138925303E-4 0.0 0.0 26.121033208841418 0.0 36 5.049699138925303E-4 0.0 0.0 26.656402311550277 0.0 37 5.049699138925303E-4 0.0 0.0 27.17490541913513 0.0 38 5.554669052817834E-4 0.0 0.0 27.709719054938706 0.0 39 5.554669052817834E-4 0.0 0.0 28.22807067154939 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACGATG 25 3.8918304E-5 45.000004 1 ATAGCGT 20 7.0345245E-4 45.0 13 AATGCGC 20 7.0345245E-4 45.0 44 CGTTTTT 53260 0.0 44.573322 1 TATAGCG 65 0.0 41.53846 1 GTTTTTT 60155 0.0 39.542847 2 TTGCGAG 100 0.0 38.250004 1 ATAGCGG 225 0.0 38.000004 2 TAGTGCG 125 0.0 37.800003 1 TACCCGT 30 1.14022E-4 37.500004 32 CTGCGAA 30 1.14022E-4 37.500004 44 AATAGCG 60 1.5643309E-10 37.500004 1 CGAGATA 205 0.0 37.317074 19 AACGTAG 110 0.0 36.81818 1 TTAGCCG 55 2.752131E-9 36.81818 1 TCGATAG 110 0.0 36.81818 1 TCATCGA 55 2.752131E-9 36.81818 16 TATCGAG 55 2.752131E-9 36.81818 1 TTCGTAG 80 0.0 36.5625 1 CCCTACG 25 0.0021074754 36.000004 32 >>END_MODULE