##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934895.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2289087 Sequences flagged as poor quality 0 Sequence length 51 %GC 37 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.67468427368641 34.0 31.0 34.0 31.0 34.0 2 32.8324244556891 34.0 31.0 34.0 31.0 34.0 3 32.87452901527989 34.0 31.0 34.0 31.0 34.0 4 36.252821321339034 37.0 37.0 37.0 35.0 37.0 5 36.15030315579967 37.0 37.0 37.0 35.0 37.0 6 36.1412764128231 37.0 36.0 37.0 35.0 37.0 7 36.297684185878474 37.0 37.0 37.0 35.0 37.0 8 36.32213367163415 37.0 37.0 37.0 35.0 37.0 9 38.111731445768555 39.0 39.0 39.0 37.0 39.0 10 37.657858788241775 39.0 38.0 39.0 35.0 39.0 11 37.54692110872151 39.0 37.0 39.0 35.0 39.0 12 37.558427879761666 39.0 37.0 39.0 35.0 39.0 13 37.598296613453314 39.0 37.0 39.0 35.0 39.0 14 38.952029346197854 40.0 38.0 41.0 35.0 41.0 15 38.98457245181157 40.0 38.0 41.0 35.0 41.0 16 39.05216970783548 41.0 38.0 41.0 35.0 41.0 17 39.05962289768803 41.0 38.0 41.0 35.0 41.0 18 38.53642172621661 39.0 38.0 41.0 35.0 41.0 19 38.0298415918661 39.0 37.0 41.0 35.0 41.0 20 37.45648723705128 38.0 35.0 41.0 35.0 41.0 21 37.39252068619498 38.0 35.0 41.0 34.0 41.0 22 37.19578810241813 38.0 35.0 41.0 34.0 41.0 23 37.101021498964435 38.0 35.0 40.0 34.0 41.0 24 36.9146760258566 38.0 35.0 40.0 33.0 41.0 25 36.75885014418412 38.0 35.0 40.0 33.0 41.0 26 36.90674578991537 38.0 35.0 40.0 34.0 41.0 27 36.9479840652627 38.0 35.0 40.0 34.0 41.0 28 36.88249157852017 38.0 35.0 40.0 33.0 41.0 29 36.75890824595133 38.0 35.0 40.0 33.0 41.0 30 36.451192549693396 38.0 35.0 41.0 33.0 41.0 31 35.88971978784555 38.0 35.0 41.0 31.0 41.0 32 35.13982954776293 38.0 35.0 41.0 23.0 41.0 33 34.14911403542111 38.0 34.0 41.0 16.0 41.0 34 33.28490136023664 38.0 33.0 41.0 12.0 41.0 35 32.79306596909598 38.0 33.0 41.0 10.0 41.0 36 32.54535367157299 38.0 32.0 41.0 8.0 41.0 37 32.28817078599459 38.0 31.0 41.0 8.0 41.0 38 32.17350105085565 38.0 31.0 41.0 7.0 41.0 39 32.07950680773601 38.0 30.0 41.0 7.0 41.0 40 31.93252156864287 37.0 30.0 40.0 7.0 41.0 41 31.80694005950844 37.0 29.0 40.0 7.0 41.0 42 31.70537948098958 37.0 29.0 40.0 7.0 41.0 43 31.638491241267808 37.0 28.0 40.0 7.0 41.0 44 31.53877593992714 37.0 27.0 40.0 7.0 41.0 45 31.48508029620543 37.0 27.0 40.0 7.0 41.0 46 31.423352629236025 37.0 26.0 40.0 7.0 41.0 47 31.398682968362497 36.0 26.0 40.0 7.0 41.0 48 31.350202941172615 36.0 26.0 40.0 7.0 41.0 49 31.22613469911803 36.0 26.0 40.0 7.0 41.0 50 31.147086589544216 36.0 26.0 40.0 7.0 41.0 51 30.58323951863778 35.0 24.0 40.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 10.0 9 20.0 10 23.0 11 16.0 12 24.0 13 29.0 14 44.0 15 100.0 16 177.0 17 335.0 18 665.0 19 1295.0 20 2316.0 21 3761.0 22 6254.0 23 11011.0 24 22531.0 25 49589.0 26 92151.0 27 118426.0 28 109855.0 29 85710.0 30 65885.0 31 55334.0 32 52101.0 33 61096.0 34 103125.0 35 134523.0 36 161166.0 37 204626.0 38 394773.0 39 551754.0 40 361.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 27.546178891409546 16.04565488336616 18.099049970577788 38.309116254646504 2 51.02942788980934 17.850304510051387 18.7469065177514 12.37336108238787 3 22.856973107618888 17.645026161085184 47.21013224923299 12.287868482062937 4 20.778720948570324 18.85065967348554 47.13119247979653 13.239426898147602 5 19.00277272117661 21.214047347261157 45.76208767949842 14.021092252063813 6 19.600259841587498 24.39771839165571 44.72180393318384 11.28021783357295 7 59.95088871676787 4.053362759912576 32.61898739541136 3.376761127908201 8 61.253809925092405 3.302058855779619 32.192660217807365 3.251471001320614 9 56.72300790664575 5.315743787807104 33.724144167521814 4.237104138025335 10 28.598738274255194 21.11112421677289 39.447299294434856 10.842838214537062 11 20.703581821049177 19.20757052921099 46.17260069189157 13.91624695784826 12 18.959960892705258 17.03146276222791 49.053050408306895 14.955525936759939 13 17.154918096166725 17.324898529413694 50.211721966006536 15.308461408413049 14 14.793365215039882 19.504239026301754 49.12163670493957 16.580759053718797 15 14.351442299921322 19.47807138828712 51.23291513166603 14.937571180125525 16 16.071429351527485 19.303460287878966 49.37112481963333 15.253985540960215 17 16.214848976906513 19.18489773433688 47.86445425621656 16.735799032540047 18 16.276926128189974 19.179087557615766 48.98446411167422 15.559522202520043 19 17.068901269370716 19.614326585228085 47.749954457825325 15.566817687575876 20 18.01202837637888 19.77067713022703 47.727500090647496 14.489794402746597 21 17.57368767547935 19.66080799899698 48.13600356823485 14.629500757288824 22 17.076589924279855 18.728995446656242 47.35058125794257 16.843833371121324 23 16.296147765462823 18.741271083187314 48.2694628906634 16.693118260686465 24 16.495790679864943 18.270996253091297 48.67307358785402 16.56013947918974 25 15.474379086509163 20.179573777667688 47.59469605130779 16.751351084515353 26 15.170327733284056 20.251785974058652 47.79822697870373 16.779659313953555 27 15.670745585467044 19.568631511165805 48.12158734028021 16.639035563086942 28 14.601323584468393 19.78308382337587 48.661846404265106 16.95374618789063 29 15.915122492067798 18.66088969095539 48.54468178797923 16.879306028997586 30 16.88013605424346 19.16205019730574 47.08803116701113 16.869782581439672 31 17.380947076279757 20.5409405583973 45.39311961493818 16.68499275038476 32 18.17266010422496 21.445274906545713 43.60511417870968 16.776950810519654 33 18.260468038130487 22.796687063444946 41.38933994208171 17.553504956342856 34 18.03055104502363 23.043772473479603 40.872671069295315 18.053005412201458 35 18.552331125903034 23.900227470602907 38.248305984001476 19.299135419492575 36 18.991938707441 25.81142612753469 37.318590337545054 17.878044827479254 37 19.545521860899125 25.96480605586419 37.152279489595635 17.337392593641045 38 20.095697542295245 26.588897669682282 35.12387253083871 18.19153225718376 39 20.244665231159846 25.47723175222261 36.19862416762666 18.079478848990885 40 19.520490046905163 25.118092933995083 37.1341499908042 18.22726702829556 41 18.138803811301187 26.41350022956751 35.50983427016972 19.93786168896158 42 18.753153549865075 26.50978315808879 35.18961926741972 19.54744402462641 43 19.53267831235772 25.944317537952905 35.01522659470785 19.50777755498153 44 19.27126404544694 25.389729617091877 35.30595385845972 20.033052479001455 45 19.281617518250727 24.18322239390639 35.81419142216962 20.720968665673254 46 19.764517469191865 24.591376387179693 36.415042329103265 19.22906381452518 47 18.23146084006418 24.509553372152304 38.04564876739067 19.213337020392846 48 18.44787900154079 23.308550526913134 38.26171744455322 19.98185302699286 49 18.705099456682948 23.230702895958082 38.62483164685309 19.439366000505878 50 18.219884172161215 22.608664502485052 38.911627212071885 20.259824113281848 51 18.07039225682554 22.577647769612952 37.712371788402976 21.639588185158537 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 397.0 1 961.5 2 1526.0 3 98447.0 4 195368.0 5 134190.0 6 73012.0 7 68506.5 8 64001.0 9 62008.5 10 60016.0 11 57263.0 12 54510.0 13 51063.5 14 47617.0 15 43342.0 16 39067.0 17 35586.5 18 32106.0 19 29468.0 20 26830.0 21 24723.5 22 22617.0 23 21264.0 24 19911.0 25 20112.0 26 21893.0 27 23473.0 28 25757.5 29 28042.0 30 30781.5 31 33521.0 32 36989.0 33 40457.0 34 45729.0 35 51001.0 36 56075.5 37 61150.0 38 65301.5 39 69453.0 40 73347.0 41 77241.0 42 83561.0 43 89881.0 44 96929.5 45 103978.0 46 110103.5 47 116229.0 48 128368.5 49 140508.0 50 150078.0 51 159648.0 52 158018.5 53 156389.0 54 133507.0 55 110625.0 56 100644.5 57 90664.0 58 81819.0 59 72974.0 60 68751.5 61 64529.0 62 57465.0 63 50401.0 64 42761.0 65 35121.0 66 28374.5 67 21628.0 68 17830.0 69 14032.0 70 11402.0 71 8772.0 72 7013.5 73 5255.0 74 4353.5 75 2630.5 76 1809.0 77 1322.5 78 836.0 79 600.0 80 364.0 81 261.5 82 159.0 83 120.5 84 82.0 85 90.0 86 98.0 87 55.5 88 13.0 89 9.0 90 5.0 91 4.0 92 3.0 93 1.5 94 0.0 95 1.0 96 2.0 97 1.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2289087.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.787114659604416 #Duplication Level Percentage of deduplicated Percentage of total 1 77.41137108254426 24.606841285580202 2 9.667394969852745 6.145971847327844 3 3.6868484945386637 3.515828274854713 4 1.7883037016594903 2.273800592433809 5 0.9912056127807563 1.5753783232352676 6 0.6767989660962966 1.2908091802082822 7 0.47985901509265527 1.0677333473236554 8 0.3601277368885926 0.9157937331665237 9 0.2908909781210755 0.8321926387481196 >10 3.76641061564165 30.265404737092684 >50 0.802831582419649 16.20050488170169 >100 0.07108712275481818 4.486260099571168 >500 0.004346403467134404 0.9296805758546562 >1k 0.0022433050152951763 1.312694711468027 >5k 1.4020656345594852E-4 0.2467263503322808 >10k+ 1.4020656345594852E-4 4.33437942110109 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 97254 4.24859343484979 No Hit CCTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGCCGTCTTCTGC 5536 0.24184314532387802 No Hit GCTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGCCGTCTTCTGC 4133 0.1805523337470354 No Hit CTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGCCGTCTTCTGCT 2842 0.1241543025669186 Illumina Single End Adapter 1 (95% over 21bp) CGCTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGCCGTCTTCTG 2720 0.11882466677762794 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 2479 0.10829645181681606 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.184276962824043E-4 0.0 0.0 0.13179927193680274 0.0 2 2.184276962824043E-4 0.0 0.0 0.7118995477236121 0.0 3 2.184276962824043E-4 0.0 0.0 1.0577142764779146 0.0 4 2.184276962824043E-4 0.0 0.0 1.3694979701514185 0.0 5 2.184276962824043E-4 0.0 0.0 2.1881649758178696 0.0 6 2.184276962824043E-4 0.0 0.0 2.6592261456205026 0.0 7 2.184276962824043E-4 0.0 0.0 3.1452714553881087 0.0 8 2.184276962824043E-4 0.0 0.0 3.903259247027308 0.0 9 2.184276962824043E-4 0.0 0.0 4.1939865107791885 0.0 10 2.184276962824043E-4 0.0 0.0 4.835246541525071 0.0 11 2.184276962824043E-4 0.0 0.0 5.795716807618059 0.0 12 2.184276962824043E-4 0.0 0.0 6.56187379509822 0.0 13 2.184276962824043E-4 0.0 0.0 6.867017286804739 0.0 14 2.184276962824043E-4 0.0 0.0 6.992831639863404 0.0 15 2.184276962824043E-4 0.0 0.0 7.21781216703428 0.0 16 2.184276962824043E-4 0.0 0.0 7.711764559407309 0.0 17 2.184276962824043E-4 0.0 0.0 8.310431189378123 0.0 18 2.184276962824043E-4 0.0 0.0 8.979256795394845 0.0 19 2.184276962824043E-4 0.0 0.0 9.393483078624797 0.0 20 2.184276962824043E-4 0.0 0.0 9.806966707687389 0.0 21 2.621132355388852E-4 0.0 0.0 10.325994599593637 0.0 22 2.621132355388852E-4 0.0 0.0 10.87625765206827 0.0 23 3.05798774795366E-4 0.0 0.0 11.42306954694164 0.0 24 3.05798774795366E-4 0.0 0.0 11.85830857455396 0.0 25 3.05798774795366E-4 0.0 0.0 12.251128943548236 0.0 26 3.05798774795366E-4 0.0 0.0 12.609000881137327 0.0 27 3.4948431405184687E-4 0.0 0.0 12.960451044455715 0.0 28 3.931698533083277E-4 0.0 0.0 13.329899649947773 0.0 29 3.931698533083277E-4 0.0 0.0 13.71887569148748 0.0 30 4.368553925648086E-4 0.0 0.0 14.13869372374226 0.0 31 4.8054093182128946E-4 0.0 0.0 14.535664218965902 0.0 32 4.8054093182128946E-4 0.0 0.0 14.911141428875355 0.0 33 4.8054093182128946E-4 0.0 0.0 15.26722225935493 0.0 34 4.8054093182128946E-4 0.0 0.0 15.63741351901435 0.0 35 4.8054093182128946E-4 0.0 0.0 16.036044064729737 0.0 36 5.242264710777704E-4 0.0 0.0 16.423971653327285 0.0 37 5.242264710777704E-4 0.0 0.0 16.793070774505296 0.0 38 5.242264710777704E-4 0.0 0.0 17.150549542241077 0.0 39 5.242264710777704E-4 0.0 0.0 17.51112998326407 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGATG 50 2.1827873E-11 45.0 1 GCGTACA 20 7.0347544E-4 45.0 39 CGTTTTT 63395 0.0 44.53861 1 GTTGCGT 45 1.9297659E-8 40.0 13 GTTTTTT 71470 0.0 39.651253 2 CGAAACG 40 3.4602272E-7 39.375 1 GCGTAAG 90 0.0 37.5 1 TATAGCG 60 1.5643309E-10 37.499996 1 TCGATGG 175 0.0 37.285713 2 ACGGGTC 145 0.0 37.241383 5 ACGTTAG 135 0.0 36.666668 1 CGCATCG 50 4.8825314E-8 36.0 21 ATAGCGT 25 0.0021075443 36.0 28 TCGTCAA 25 0.0021075443 36.0 43 TGTTACG 50 4.8825314E-8 36.0 1 GCGATTC 200 0.0 36.0 9 ATACCGG 190 0.0 35.526314 2 GCGATAC 70 2.1827873E-11 35.357143 9 TAGTACG 45 8.7049375E-7 35.0 1 TTATGCG 130 0.0 34.615387 1 >>END_MODULE