SRR2934892.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934892.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1071367
Sequences flagged as poor quality	0
Sequence length	51
%GC	38

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	46029	4.2962868932868	No Hit
GCTGTCTCTTATACACATCTGACGCACAGCGAATCGTATGCCGTCTTCTGC	3071	0.2866431390923932	No Hit
CCTGTCTCTTATACACATCTGACGCACAGCGAATCGTATGCCGTCTTCTGC	2858	0.266761996589404	No Hit
CTGTCTCTTATACACATCTGACGCACAGCGAATCGTATGCCGTCTTCTGCT	1572	0.14672843199389193	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA	1245	0.11620667801042966	No Hit
CGCTGTCTCTTATACACATCTGACGCACAGCGAATCGTATGCCGTCTTCTG	1187	0.110793033572996	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCCCCGA	20	7.033071E-4	45.000004	10
ATAGGCG	20	7.033071E-4	45.000004	1
TAGACCG	20	7.033071E-4	45.000004	1
TACGCTA	20	7.033071E-4	45.000004	1
CGCTAAC	20	7.033071E-4	45.000004	31
TACCTAG	40	6.8139343E-9	45.000004	2
ACGTCGA	20	7.033071E-4	45.000004	24
TAGATCG	40	6.8139343E-9	45.000004	1
GTATACG	20	7.033071E-4	45.000004	1
CGCCCGT	20	7.033071E-4	45.000004	20
TAACGCG	25	3.8906277E-5	45.0	1
GACCCGT	35	1.211829E-7	45.0	10
TTACGCG	25	3.8906277E-5	45.0	1
TGCGTAG	55	1.8189894E-12	45.0	1
GTACCTA	30	2.1653632E-6	44.999996	1
TATACGG	30	2.1653632E-6	44.999996	2
CGTTTTT	29135	0.0	44.54436	1
GCGATAT	80	0.0	42.187504	9
CCGTAGG	60	3.6379788E-12	41.249996	1
GTTTTTT	32230	0.0	40.343624	2