##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934889.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 870754 Sequences flagged as poor quality 0 Sequence length 51 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.44677945780324 34.0 31.0 34.0 30.0 34.0 2 32.61576633584227 34.0 31.0 34.0 31.0 34.0 3 32.67925843579243 34.0 31.0 34.0 31.0 34.0 4 36.11966870091897 37.0 37.0 37.0 35.0 37.0 5 35.9843836491133 37.0 35.0 37.0 35.0 37.0 6 35.96939319256644 37.0 35.0 37.0 35.0 37.0 7 36.13563072923007 37.0 36.0 37.0 35.0 37.0 8 36.13856611626246 37.0 37.0 37.0 35.0 37.0 9 37.91813302034788 39.0 38.0 39.0 35.0 39.0 10 37.47816375233418 39.0 37.0 39.0 34.0 39.0 11 37.40372596623156 39.0 37.0 39.0 34.0 39.0 12 37.27494332498042 39.0 37.0 39.0 34.0 39.0 13 37.18655785675403 39.0 37.0 39.0 34.0 39.0 14 38.3972132198072 40.0 38.0 41.0 34.0 41.0 15 38.45058420633153 40.0 38.0 41.0 34.0 41.0 16 38.5315473715883 40.0 38.0 41.0 34.0 41.0 17 38.543516308854166 40.0 38.0 41.0 34.0 41.0 18 38.08067031561153 39.0 38.0 40.0 34.0 41.0 19 37.61985589500594 38.0 37.0 40.0 34.0 41.0 20 37.10403282672259 38.0 35.0 40.0 34.0 41.0 21 37.07026094626037 38.0 35.0 40.0 34.0 41.0 22 36.88121214487674 38.0 35.0 40.0 33.0 41.0 23 36.7594636372615 37.0 35.0 40.0 33.0 41.0 24 36.527298180657226 37.0 35.0 40.0 33.0 41.0 25 36.39962147747814 37.0 35.0 40.0 33.0 41.0 26 36.55038506857275 37.0 35.0 40.0 33.0 41.0 27 36.6098461792883 37.0 35.0 40.0 33.0 41.0 28 36.54659180434428 37.0 35.0 40.0 33.0 41.0 29 36.457666574026646 37.0 35.0 40.0 33.0 41.0 30 36.17846027695538 37.0 35.0 40.0 32.0 41.0 31 35.67486339425371 37.0 35.0 40.0 30.0 41.0 32 34.97084136277295 37.0 35.0 40.0 24.0 41.0 33 34.01476651270049 37.0 34.0 40.0 18.0 41.0 34 33.23932706596811 37.0 33.0 40.0 12.0 41.0 35 32.77425771228154 37.0 33.0 40.0 10.0 41.0 36 32.54985449392136 37.0 32.0 40.0 9.0 41.0 37 32.3566644540249 37.0 31.0 40.0 8.0 41.0 38 32.24251395916642 37.0 31.0 40.0 8.0 41.0 39 32.22504863600971 37.0 31.0 40.0 8.0 41.0 40 32.138939356006404 37.0 31.0 40.0 8.0 41.0 41 31.99650992128661 37.0 31.0 40.0 8.0 41.0 42 31.841360476093133 37.0 30.0 40.0 8.0 41.0 43 31.704089788849664 36.0 29.0 40.0 7.0 41.0 44 31.556602668491905 36.0 29.0 40.0 7.0 41.0 45 31.522544828964325 36.0 28.0 40.0 7.0 41.0 46 31.42649014532233 36.0 28.0 40.0 7.0 41.0 47 31.36475169795373 35.0 28.0 40.0 7.0 41.0 48 31.294889256896898 35.0 28.0 40.0 7.0 41.0 49 31.134854390562662 35.0 27.0 40.0 7.0 41.0 50 30.940001424053175 35.0 27.0 40.0 7.0 41.0 51 30.27236509967224 35.0 24.0 39.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 2.0 10 6.0 11 5.0 12 12.0 13 13.0 14 30.0 15 36.0 16 87.0 17 157.0 18 316.0 19 625.0 20 1024.0 21 1785.0 22 2822.0 23 4835.0 24 9194.0 25 19569.0 26 34373.0 27 42439.0 28 38001.0 29 30391.0 30 24715.0 31 22594.0 32 23070.0 33 28872.0 34 53930.0 35 67121.0 36 61627.0 37 83002.0 38 150187.0 39 169821.0 40 90.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.5476632895169 15.981896149773645 18.465490827489738 35.00494973321972 2 49.463798041697196 18.542780165236106 18.24901177600103 13.74441001706567 3 22.29573450136319 18.85710545113775 45.66306901834502 13.184091029154043 4 22.10233889250006 19.76597293839592 44.35236588060463 13.779322288499394 5 18.970340647301075 21.99025212631811 43.74725812341948 15.292149102961341 6 19.960631820238554 24.640598837329485 43.64114319314066 11.757626149291305 7 58.38434276500596 5.214101801427269 31.801633986177496 4.599921447389274 8 57.908777909719625 4.833397262602297 31.853657864333666 5.404166963344411 9 53.46435388180818 6.559717210601387 33.91210376294568 6.063825144644756 10 30.48518869853024 18.705397850598445 39.57374872811379 11.235664722757518 11 25.638239962147747 18.030580393543985 41.270554025591615 15.060625618716653 12 22.286202532517795 16.209629815079804 46.73639167893573 14.767775973466673 13 18.637181109704922 19.916187579959438 46.95482306139277 14.491808248942869 14 14.950835712497446 22.600412975421303 46.28838914320233 16.160362168878926 15 15.021349313353713 19.162128454190277 51.18977346070187 14.626748771754135 16 15.855913380817086 19.171315894041257 48.64014405905686 16.332626666084796 17 15.812502727521204 19.394455839421926 45.320607197899754 19.472434235157117 18 16.829896848019075 19.802722697799837 47.767222430215654 15.600158023965438 19 18.175397414195054 20.905674851909954 45.10837733734212 15.810550396552872 20 18.53347788238699 21.514916957028046 45.27777075959456 14.673834400990406 21 17.392168166899033 21.607135884532255 46.00943550072696 14.991260447841755 22 16.247642847463233 20.734214255691043 44.19583487414356 18.822308022702163 23 16.414280037760378 20.100395748971582 45.455203191716606 18.030121021551437 24 17.614963583285288 18.607207087191103 46.161028258268125 17.616801071255487 25 15.75898589038925 20.26772199725755 44.880413986039684 19.09287812631352 26 15.619796176646904 21.34713133674953 45.648828486576 17.384244000027564 27 17.536296129561276 21.243313266433457 44.4102467516658 16.81014385233947 28 14.203552323618382 22.30262508125142 45.819944553800504 17.6738780413297 29 17.037418145653078 19.608752873946028 44.69471285805176 18.659116122349136 30 18.153003029558292 20.70228790220889 42.49466554273653 18.650043525496294 31 18.525783401511795 21.884252039037435 41.702937913578346 17.887026645872428 32 18.922795646072256 21.61333740643167 40.880087831924975 18.583779115571105 33 18.53439662637209 23.197941094729398 38.84196914398326 19.425693134915257 34 16.967593602785634 23.82624713753827 39.75072178824329 19.455437471432806 35 18.29988722417583 23.306812256963504 37.216366505350535 21.176934013510127 36 19.940993667557084 26.91035585251403 34.86116629955188 18.287484180377007 37 18.456533073635033 26.83743054869688 37.0676448227628 17.63839155490529 38 16.984705209508082 27.92832418800258 34.22470640387526 20.862264198614074 39 18.646368549555902 25.2014920402318 35.52530335777958 20.626836052432722 40 19.752306621617585 22.702049028772763 37.28159732829249 20.264047021317158 41 17.7796484426141 25.025552567085533 35.249335633255775 21.945463357044584 42 19.07806337955381 25.15486578298808 34.676728444543464 21.090342392914646 43 20.028159503143254 24.94286560842672 33.74316971268579 21.28580517574424 44 17.93778725104909 24.805743068650848 33.869956382629304 23.386513297670756 45 18.34949939937112 23.502849254783786 33.64428989128962 24.503361454555478 46 19.26709495448772 23.810513646793467 35.531390036680854 21.391001362037958 47 16.87215907133358 23.393978092549673 38.59815745893789 21.13570537717886 48 16.603885827684973 22.486373878271017 37.704449247433836 23.20529104661018 49 17.762766521887926 21.539723044625692 38.77742737903013 21.920083054456253 50 17.066817953176212 21.222641526768754 38.17875082974066 23.531789690314373 51 16.348130470833325 21.371937424347177 36.072645086901694 26.207287017917803 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 463.0 1 663.5 2 864.0 3 32177.5 4 63491.0 5 42826.0 6 22161.0 7 21018.0 8 19875.0 9 19994.0 10 20113.0 11 19599.0 12 19085.0 13 18171.5 14 17258.0 15 16005.0 16 14752.0 17 13597.5 18 12443.0 19 11229.5 20 10016.0 21 9255.5 22 8495.0 23 8032.0 24 7569.0 25 7661.0 26 7723.0 27 7693.0 28 8168.5 29 8644.0 30 9126.5 31 9609.0 32 11359.0 33 13109.0 34 13890.0 35 14671.0 36 15714.0 37 16757.0 38 18529.5 39 20302.0 40 23630.0 41 26958.0 42 32024.0 43 37090.0 44 42310.0 45 47530.0 46 55667.5 47 63805.0 48 72159.0 49 80513.0 50 79826.0 51 79139.0 52 66353.0 53 53567.0 54 46420.5 55 39274.0 56 35365.5 57 31457.0 58 28754.5 59 26052.0 60 25372.5 61 24693.0 62 21311.5 63 17930.0 64 14799.5 65 11669.0 66 9105.0 67 6541.0 68 5307.5 69 4074.0 70 3130.5 71 2187.0 72 1830.5 73 1474.0 74 1075.0 75 497.0 76 318.0 77 343.0 78 368.0 79 282.0 80 196.0 81 130.0 82 64.0 83 54.0 84 44.0 85 25.5 86 7.0 87 4.5 88 2.0 89 1.5 90 1.0 91 1.5 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 870754.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.855303928414074 #Duplication Level Percentage of deduplicated Percentage of total 1 75.28747587031471 26.2416785346296 2 10.595285816884386 7.386038147118406 3 4.299560887510607 4.495875044787119 4 2.2821134621680175 3.1817503329196617 5 1.3372961901227838 2.330593257451992 6 0.8667286269050741 1.812605382854002 7 0.607240538877832 1.4815887478168543 8 0.43558792677995184 1.2146039660370398 9 0.3052864596355623 0.9576767102244335 >10 3.3991890859177825 28.318496960695725 >50 0.49986056551674607 11.19358701703636 >100 0.07664303512181452 4.5972965220447595 >500 0.0053784586050394274 1.220884108359594 >1k 0.0020169219768897853 1.8415197246725277 >5k 0.0 0.0 >10k+ 3.361536628149642E-4 3.7258055433518935 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 31799 3.6518924977663034 No Hit GCTGTCTCTTATACACATCTGACGCGGACCTTATCGTATGCCGTCTTCTGC 4603 0.528622320425746 TruSeq Adapter, Index 23 (95% over 22bp) CCTGTCTCTTATACACATCTGACGCGGACCTTATCGTATGCCGTCTTCTGC 4492 0.5158747476325115 TruSeq Adapter, Index 23 (95% over 22bp) CTGTCTCTTATACACATCTGACGCGGACCTTATCGTATGCCGTCTTCTGCT 2602 0.2988214811531156 TruSeq Adapter, Index 20 (95% over 24bp) TCTGTCTCTTATACACATCTGACGCGGACCTTATCGTATGCCGTCTTCTGC 1520 0.1745613571686148 TruSeq Adapter, Index 23 (95% over 22bp) CGCTGTCTCTTATACACATCTGACGCGGACCTTATCGTATGCCGTCTTCTG 1409 0.1618137843753804 TruSeq Adapter, Index 20 (95% over 22bp) ACTGTCTCTTATACACATCTGACGCGGACCTTATCGTATGCCGTCTTCTGC 1091 0.125293710967736 TruSeq Adapter, Index 20 (95% over 23bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGGACCTTATCGTATGCC 974 0.11185708018567816 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.31822994783831027 0.0 2 0.0 0.0 0.0 1.757327557496147 0.0 3 0.0 0.0 0.0 2.461544822073743 0.0 4 0.0 0.0 0.0 3.1324576171915375 0.0 5 0.0 0.0 0.0 4.830066815656316 0.0 6 0.0 0.0 0.0 5.6638269821327265 0.0 7 0.0 0.0 0.0 6.5850975131897185 0.0 8 0.0 0.0 0.0 8.026147453815888 0.0 9 0.0 0.0 0.0 8.560626767146633 0.0 10 0.0 0.0 0.0 9.737078440064588 0.0 11 0.0 0.0 0.0 11.388405910280056 0.0 12 0.0 0.0 0.0 12.743668131297703 0.0 13 0.0 0.0 0.0 13.281133362580016 0.0 14 0.0 0.0 0.0 13.497153042076178 0.0 15 0.0 0.0 0.0 13.899448064550953 0.0 16 0.0 0.0 0.0 14.799128111958142 0.0 17 0.0 0.0 0.0 15.815144116478363 0.0 18 0.0 0.0 0.0 17.070148400122193 0.0 19 0.0 0.0 0.0 17.71372856168332 0.0 20 0.0 0.0 0.0 18.348006440395334 0.0 21 0.0 0.0 0.0 19.121588875847827 0.0 22 0.0 0.0 0.0 19.927442193776887 0.0 23 0.0 0.0 0.0 20.692985619359774 0.0 24 0.0 0.0 0.0 21.32887130004571 0.0 25 0.0 0.0 0.0 21.847846808627924 0.0 26 0.0 0.0 0.0 22.36728168920269 0.0 27 0.0 0.0 0.0 22.856053489274814 0.0 28 0.0 0.0 0.0 23.354701787186738 0.0 29 1.1484299813724657E-4 0.0 0.0 23.848526679176896 0.0 30 1.1484299813724657E-4 0.0 0.0 24.393341862339994 0.0 31 1.1484299813724657E-4 0.0 0.0 24.93907578948819 0.0 32 2.2968599627449314E-4 0.0 0.0 25.533732833842855 0.0 33 2.2968599627449314E-4 0.0 0.0 26.04696619251821 0.0 34 2.2968599627449314E-4 0.0 0.0 26.52459822177102 0.0 35 2.2968599627449314E-4 0.0 0.0 27.005216168975394 0.0 36 2.2968599627449314E-4 0.0 0.0 27.517875312660063 0.0 37 2.2968599627449314E-4 0.0 0.0 27.992521423961303 0.0 38 2.2968599627449314E-4 0.0 0.0 28.5247038773293 0.0 39 2.2968599627449314E-4 0.0 0.0 29.00704446950574 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGCGAC 30 2.164892E-6 45.000004 35 GTACCGG 40 6.8121153E-9 45.000004 2 GTCGATT 20 7.032343E-4 45.000004 8 TCACCGA 20 7.032343E-4 45.000004 24 CAACGAA 20 7.032343E-4 45.000004 36 GGATGCG 20 7.032343E-4 45.000004 15 ACGTTAC 20 7.032343E-4 45.000004 29 CCGATAT 20 7.032343E-4 45.000004 11 TTAGCGA 35 1.2114651E-7 45.000004 27 CGGTTGT 20 7.032343E-4 45.000004 14 TAGCGTA 20 7.032343E-4 45.000004 16 CTATACG 20 7.032343E-4 45.000004 1 GCACGTA 20 7.032343E-4 45.000004 18 GCGCCTA 20 7.032343E-4 45.000004 9 CACGAGA 20 7.032343E-4 45.000004 11 GTTCGCC 20 7.032343E-4 45.000004 32 TCGCTAG 20 7.032343E-4 45.000004 15 CGTACAG 20 7.032343E-4 45.000004 1 AGTTACG 35 1.2114651E-7 45.000004 1 TAAGGCG 40 6.8121153E-9 45.000004 1 >>END_MODULE