##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934888.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1791014 Sequences flagged as poor quality 0 Sequence length 51 %GC 38 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.59496910688582 34.0 31.0 34.0 31.0 34.0 2 32.76030058949846 34.0 31.0 34.0 31.0 34.0 3 32.811624029739576 34.0 31.0 34.0 31.0 34.0 4 36.20943108205743 37.0 37.0 37.0 35.0 37.0 5 36.10207513732444 37.0 35.0 37.0 35.0 37.0 6 36.08770171534114 37.0 36.0 37.0 35.0 37.0 7 36.23391609445822 37.0 37.0 37.0 35.0 37.0 8 36.25368813420777 37.0 37.0 37.0 35.0 37.0 9 38.04338715386926 39.0 39.0 39.0 35.0 39.0 10 37.57580119418385 39.0 38.0 39.0 35.0 39.0 11 37.50164264489278 39.0 37.0 39.0 35.0 39.0 12 37.49127254169984 39.0 37.0 39.0 35.0 39.0 13 37.498228936233886 39.0 37.0 39.0 35.0 39.0 14 38.818013147859254 40.0 38.0 41.0 35.0 41.0 15 38.841078294195356 40.0 38.0 41.0 35.0 41.0 16 38.918015716236724 40.0 38.0 41.0 35.0 41.0 17 38.944759225779364 40.0 38.0 41.0 35.0 41.0 18 38.41975048771255 39.0 38.0 41.0 35.0 41.0 19 37.90404597619003 38.0 37.0 41.0 35.0 41.0 20 37.32567305448199 38.0 35.0 41.0 34.0 41.0 21 37.27821948907155 38.0 35.0 41.0 34.0 41.0 22 37.1073542697042 38.0 35.0 40.0 34.0 41.0 23 37.00079731370051 38.0 35.0 40.0 34.0 41.0 24 36.796722415346835 37.0 35.0 40.0 33.0 41.0 25 36.66350290952499 37.0 35.0 40.0 33.0 41.0 26 36.783251833877344 38.0 35.0 40.0 33.0 41.0 27 36.818329169956236 38.0 35.0 40.0 33.0 41.0 28 36.77002859832475 38.0 35.0 40.0 33.0 41.0 29 36.62994817460947 38.0 35.0 40.0 33.0 41.0 30 36.34596044475364 38.0 35.0 40.0 33.0 41.0 31 35.79795411984496 38.0 35.0 40.0 31.0 41.0 32 34.99129375873109 38.0 35.0 40.0 23.0 41.0 33 33.94150296982603 38.0 34.0 40.0 16.0 41.0 34 33.03709072067555 38.0 33.0 40.0 10.0 41.0 35 32.50253934363439 38.0 32.0 41.0 8.0 41.0 36 32.2708633210014 38.0 31.0 41.0 8.0 41.0 37 32.02768878411894 38.0 30.0 40.0 7.0 41.0 38 31.891310174013157 38.0 30.0 40.0 7.0 41.0 39 31.823728346065412 37.0 29.0 40.0 7.0 41.0 40 31.706263044286644 37.0 29.0 40.0 7.0 41.0 41 31.60383335920322 37.0 28.0 40.0 7.0 41.0 42 31.478272643318256 37.0 27.0 40.0 7.0 41.0 43 31.36857389166137 37.0 26.0 40.0 7.0 41.0 44 31.26466571450586 37.0 25.0 40.0 7.0 41.0 45 31.235682691480914 37.0 24.0 40.0 7.0 41.0 46 31.179248738424157 37.0 24.0 40.0 7.0 41.0 47 31.12816259392724 37.0 24.0 40.0 7.0 41.0 48 31.04867968647928 36.0 24.0 40.0 7.0 41.0 49 30.901766820359864 36.0 24.0 40.0 7.0 41.0 50 30.79908197255856 36.0 24.0 40.0 7.0 41.0 51 30.256906422842032 35.0 23.0 40.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 12.0 10 13.0 11 12.0 12 22.0 13 24.0 14 33.0 15 87.0 16 137.0 17 263.0 18 585.0 19 1030.0 20 1900.0 21 3073.0 22 5332.0 23 9500.0 24 19799.0 25 44558.0 26 79738.0 27 96197.0 28 85422.0 29 66109.0 30 50647.0 31 43224.0 32 42249.0 33 48867.0 34 83165.0 35 112044.0 36 117510.0 37 161106.0 38 304677.0 39 413447.0 40 229.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.966942748632896 16.342976660148945 18.332073339460216 36.35800725175794 2 51.14063876664281 17.86049690287178 18.03743577660476 12.96142855388065 3 23.14013179126461 17.809241022124898 46.32761106278343 12.72301612382706 4 20.595986407699773 19.113418432240064 46.599468234195825 13.691126925864342 5 19.02140351778378 21.60117118012478 45.28244893674756 14.094976365343879 6 19.585385708877766 25.07719090973047 44.26844234606765 11.068981035324125 7 58.79083022243265 4.62173941688898 32.960267200591396 3.627163160086967 8 59.87127962148816 4.0250383302419745 32.457702731525266 3.645979316744593 9 55.348478571356786 5.960589922803507 34.02726053509353 4.663670970746181 10 29.306638585739698 19.619779633213362 40.487734880911034 10.5858469001359 11 22.28363374043977 19.503644304287963 43.648570027928315 14.564151927343952 12 20.67482442906644 16.713437192562424 47.69711459541913 14.914623782952004 13 18.37277653887686 18.49600282298184 47.942059637724775 15.189161000416524 14 15.173024889811023 20.507656556565163 47.75400973973403 16.565308813889786 15 14.310887575418171 20.128709211653288 50.95080217128398 14.609601041644565 16 16.33426651047954 19.090917212260763 49.53222029531874 15.042595981940957 17 16.33599737355487 19.197784048589234 47.12715813500062 17.339060442855274 18 16.53700082746422 20.072316575973165 48.10034985767839 15.29033273888423 19 17.496624817003106 21.229258956099727 46.22096756362597 15.053148663271196 20 18.770875046202878 20.147581202603664 47.063339538384405 14.018204212809056 21 17.49416810812199 20.435406981743302 47.34842943717916 14.721995472955543 22 16.499312679856214 19.493649965885247 46.716106071755995 17.290931282502537 23 16.202274242412397 20.336412780692946 47.12514810046153 16.336164876433127 24 16.842079403064407 18.56171978555165 47.866069165288486 16.730131646095455 25 15.928462870753663 20.057855494150242 46.43051366432647 17.58316797076963 26 15.249294533711073 21.34595262795266 47.05524356593527 16.349509272400997 27 15.451303004889969 21.384366621366443 47.63167680431309 15.532653569430503 28 14.264712615311772 20.704360769932563 48.15143823554701 16.87948837920865 29 15.104572046896338 19.915422213338367 48.08616794731923 16.893837792446067 30 15.520872533659706 20.184655172991388 46.80532927157465 17.489143021774257 31 15.549962200183806 21.519373941242222 44.281507570571755 18.649156288002217 32 16.37385302404113 22.761351949230992 43.36275428332777 17.50204074340011 33 17.217844193289388 23.19122016913324 40.74658266211208 18.844352975465295 34 16.00629587485078 24.017344364700666 39.91816926054179 20.058190499906754 35 16.764804741894814 24.504721906138087 37.80947552615446 20.92099782581264 36 17.717337776254123 26.120343001227237 36.50937401941023 19.65294520310841 37 17.52872953533585 26.679523443144497 36.63946792152378 19.152279099995866 38 17.35765326234189 27.19615815398428 34.48554841000684 20.960640173666985 39 18.706274769488125 25.495278093861913 35.1069282540505 20.691518882599468 40 18.524422477992914 24.522253874062404 36.40021797707891 20.55310567086578 41 17.037331924820244 25.015717353409855 35.964487156437634 21.982463565332264 42 18.255803695560168 25.19014368396897 35.40396669149432 21.150085928976548 43 18.674058382569875 25.62207777270306 35.14969732229899 20.554166522428076 44 17.650224956365502 25.75669425252957 34.64981289928499 21.94326789181994 45 17.69941496828054 24.92654998788396 34.42083646470658 22.953198579128916 46 17.643413172649684 25.22420260254805 35.08453870265671 22.047845522145558 47 16.772342371416414 24.66329129755546 37.137007304242175 21.427359026785943 48 17.192160418623192 23.337785187608805 36.98954893708257 22.48050545668543 49 17.395006404193378 22.967659660951842 37.46335874538111 22.173975189473673 50 16.869940715147955 22.794517519126035 37.22617466976808 23.109367095957932 51 16.29942591180192 22.72790720787219 35.70418768362503 25.268479196700866 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 350.0 1 776.5 2 1203.0 3 67661.5 4 134120.0 5 93666.5 6 53213.0 7 51295.0 8 49377.0 9 48415.5 10 47454.0 11 45345.5 12 43237.0 13 41042.5 14 38848.0 15 36140.5 16 33433.0 17 30808.5 18 28184.0 19 25836.5 20 23489.0 21 21769.5 22 20050.0 23 18555.5 24 17061.0 25 16549.0 26 17335.0 27 18633.0 28 19586.5 29 20540.0 30 23601.5 31 26663.0 32 28606.5 33 30550.0 34 33503.0 35 36456.0 36 39773.0 37 43090.0 38 47280.0 39 51470.0 40 56968.5 41 62467.0 42 66685.5 43 70904.0 44 79597.0 45 88290.0 46 92256.0 47 96222.0 48 106585.5 49 116949.0 50 125123.0 51 133297.0 52 129153.0 53 125009.0 54 106336.0 55 87663.0 56 76925.5 57 66188.0 58 61170.0 59 56152.0 60 53172.5 61 50193.0 62 45383.5 63 40574.0 64 33297.0 65 26020.0 66 20173.0 67 14326.0 68 11895.5 69 9465.0 70 7828.0 71 6191.0 72 4939.5 73 3688.0 74 2819.0 75 1395.0 76 840.0 77 760.0 78 680.0 79 478.0 80 276.0 81 209.5 82 143.0 83 88.0 84 33.0 85 27.0 86 21.0 87 13.5 88 6.0 89 6.5 90 7.0 91 4.0 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1791014.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.65251730177474 #Duplication Level Percentage of deduplicated Percentage of total 1 77.45564268739969 26.840329983451998 2 9.747647685423027 6.755610601414521 3 3.7134550713508028 3.8604169832804054 4 1.8310413967667063 2.5380077472689635 5 1.0855968430069203 1.8809331692524676 6 0.7201931504867156 1.4973903364716343 7 0.5148835606226131 1.248940804501214 8 0.3905828049510813 1.0827741925074443 9 0.3076149990097304 0.9593670667923092 >10 3.5531540872057206 29.24368622546461 >50 0.5976509822606272 13.209773596002858 >100 0.07627647487052734 4.932907192317806 >500 0.003953846302673876 0.902386903417052 >1k 0.002141666747281683 1.37438885935127 >5k 0.0 0.0 >10k+ 1.6474359594474485E-4 3.673086338505506 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 64341 3.5924342299948524 No Hit GCTGTCTCTTATACACATCTGACGCTTCACCCGTCGTATGCCGTCTTCTGC 4152 0.23182398350878328 No Hit CCTGTCTCTTATACACATCTGACGCTTCACCCGTCGTATGCCGTCTTCTGC 3507 0.19581086468335815 No Hit CTGTCTCTTATACACATCTGACGCTTCACCCGTCGTATGCCGTCTTCTGCT 2478 0.13835737744093568 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 1847 0.1031259387140469 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.1166858550519427E-4 0.0 0.0 0.14583917266978372 0.0 2 1.1166858550519427E-4 0.0 0.0 0.7698432284728093 0.0 3 1.1166858550519427E-4 0.0 0.0 1.128690227993751 0.0 4 1.1166858550519427E-4 0.0 0.0 1.4973082287463972 0.0 5 1.1166858550519427E-4 0.0 0.0 2.4391210788972058 0.0 6 1.1166858550519427E-4 0.0 0.0 2.94615229138354 0.0 7 1.1166858550519427E-4 0.0 0.0 3.455528544165484 0.0 8 1.1166858550519427E-4 0.0 0.0 4.211078193693628 0.0 9 1.1166858550519427E-4 0.0 0.0 4.489691314529088 0.0 10 1.1166858550519427E-4 0.0 0.0 5.190746694330698 0.0 11 1.1166858550519427E-4 0.0 0.0 6.279403734420836 0.0 12 1.1166858550519427E-4 0.0 0.0 7.184254282769426 0.0 13 1.1166858550519427E-4 0.0 0.0 7.5074231692214575 0.0 14 1.675028782577914E-4 0.0 0.0 7.638689591482813 0.0 15 1.675028782577914E-4 0.0 0.0 7.89228894916511 0.0 16 1.675028782577914E-4 0.0 0.0 8.44181005843617 0.0 17 1.675028782577914E-4 0.0 0.0 9.140743735113182 0.0 18 2.2333717101038854E-4 0.0 0.0 9.893222498539933 0.0 19 2.2333717101038854E-4 0.0 0.0 10.356088785458963 0.0 20 2.2333717101038854E-4 0.0 0.0 10.817224209302664 0.0 21 2.2333717101038854E-4 0.0 0.0 11.405326814865768 0.0 22 2.2333717101038854E-4 0.0 0.0 12.05892304582767 0.0 23 2.2333717101038854E-4 0.0 0.0 12.721341095044483 0.0 24 2.2333717101038854E-4 0.0 0.0 13.21915964922664 0.0 25 3.350057565155828E-4 0.0 0.0 13.67968089585006 0.0 26 3.350057565155828E-4 0.0 0.0 14.089727941825133 0.0 27 3.350057565155828E-4 0.0 0.0 14.511946863620274 0.0 28 3.350057565155828E-4 0.0 0.0 14.948794370116593 0.0 29 3.350057565155828E-4 0.0 0.0 15.393402843305525 0.0 30 3.350057565155828E-4 0.0 0.0 15.880612881864687 0.0 31 3.350057565155828E-4 0.0 0.0 16.363914519931168 0.0 32 3.350057565155828E-4 0.0 0.0 16.833815927737025 0.0 33 3.350057565155828E-4 0.0 0.0 17.275409349117314 0.0 34 3.350057565155828E-4 0.0 0.0 17.712033518442624 0.0 35 3.350057565155828E-4 0.0 0.0 18.164905466958942 0.0 36 3.350057565155828E-4 0.0 0.0 18.6295026169533 0.0 37 3.350057565155828E-4 0.0 0.0 19.10934252886912 0.0 38 3.908400492681799E-4 0.0 0.0 19.567295398025923 0.0 39 3.908400492681799E-4 0.0 0.0 20.01530976307276 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATGCGA 20 7.0343434E-4 45.0 1 ATCGTTC 20 7.0343434E-4 45.0 22 ATACGGT 20 7.0343434E-4 45.0 23 TCGAATC 20 7.0343434E-4 45.0 25 TTACGAG 60 0.0 44.999996 1 CGTTTTT 50165 0.0 44.520084 1 GCGTAAG 80 0.0 42.1875 1 TATACGG 75 0.0 42.000004 2 GACGTAG 55 6.184564E-11 40.909092 1 TTCGTAC 55 6.184564E-11 40.909092 33 CGTACAT 55 6.184564E-11 40.909092 35 GTTTTTT 56395 0.0 39.741554 2 TCTAGCG 85 0.0 39.705883 1 AGTACGG 210 0.0 39.642857 2 CCGCTAG 40 3.4596633E-7 39.375 3 ATATGCG 70 0.0 38.571426 1 CCCGTAG 35 6.250244E-6 38.571426 44 TACGGGA 285 0.0 37.894737 4 TACGAGG 180 0.0 37.5 2 TGCACGG 235 0.0 37.340427 2 >>END_MODULE