##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934886.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 526511 Sequences flagged as poor quality 0 Sequence length 51 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.36003806188285 33.0 31.0 34.0 30.0 34.0 2 32.54545109218991 34.0 31.0 34.0 31.0 34.0 3 32.62240485004112 34.0 31.0 34.0 31.0 34.0 4 36.06109843858913 37.0 35.0 37.0 35.0 37.0 5 35.916412002788164 37.0 35.0 37.0 35.0 37.0 6 35.906868042642984 37.0 35.0 37.0 35.0 37.0 7 36.10038156847625 37.0 35.0 37.0 35.0 37.0 8 36.108901808319295 37.0 36.0 37.0 35.0 37.0 9 37.89886441118989 39.0 38.0 39.0 35.0 39.0 10 37.378138348486544 39.0 37.0 39.0 34.0 39.0 11 37.25483608129745 39.0 37.0 39.0 34.0 39.0 12 37.21372392979444 39.0 37.0 39.0 34.0 39.0 13 37.127786503985675 39.0 37.0 39.0 33.0 39.0 14 38.29708591083567 40.0 38.0 41.0 33.0 41.0 15 38.33153913213589 40.0 37.0 41.0 34.0 41.0 16 38.45590880342481 40.0 38.0 41.0 34.0 41.0 17 38.50393818932558 40.0 38.0 41.0 34.0 41.0 18 38.080714363042745 39.0 37.0 40.0 34.0 41.0 19 37.703692800340356 38.0 37.0 40.0 34.0 41.0 20 37.22026510367305 38.0 35.0 40.0 34.0 41.0 21 37.16411812858611 38.0 35.0 40.0 34.0 41.0 22 36.966063387089726 38.0 35.0 40.0 33.0 41.0 23 36.8483564445947 38.0 35.0 40.0 33.0 41.0 24 36.61162064990095 37.0 35.0 40.0 33.0 41.0 25 36.47390462877319 37.0 35.0 40.0 33.0 41.0 26 36.67020442118019 38.0 35.0 40.0 33.0 41.0 27 36.75692055816498 38.0 35.0 40.0 33.0 41.0 28 36.73956859400848 38.0 35.0 40.0 33.0 41.0 29 36.675966883882765 38.0 35.0 40.0 33.0 41.0 30 36.385638666618554 38.0 35.0 40.0 33.0 41.0 31 35.89757099091947 38.0 35.0 40.0 31.0 41.0 32 35.30667165548298 38.0 35.0 40.0 27.0 41.0 33 34.517288337755524 38.0 35.0 40.0 20.0 41.0 34 33.83855797884565 38.0 34.0 40.0 15.0 41.0 35 33.43514380516267 38.0 34.0 40.0 10.0 41.0 36 33.2876312175814 38.0 33.0 40.0 10.0 41.0 37 33.08175897559595 38.0 33.0 40.0 10.0 41.0 38 32.982139024635764 38.0 33.0 40.0 10.0 41.0 39 32.93576582445571 38.0 33.0 40.0 10.0 41.0 40 32.7619252019426 38.0 33.0 40.0 10.0 41.0 41 32.631908924979726 38.0 32.0 40.0 9.0 41.0 42 32.57166516938867 38.0 32.0 40.0 8.0 41.0 43 32.49129837743181 38.0 32.0 40.0 8.0 41.0 44 32.36014822102482 37.0 31.0 40.0 8.0 41.0 45 32.29661488553895 37.0 31.0 40.0 8.0 41.0 46 32.19690186909675 37.0 31.0 40.0 8.0 41.0 47 32.14317839513325 37.0 31.0 40.0 8.0 41.0 48 32.133174805464655 37.0 31.0 40.0 8.0 41.0 49 32.082323066374684 37.0 31.0 40.0 8.0 41.0 50 31.977968171605152 37.0 31.0 40.0 8.0 41.0 51 31.349971795461062 35.0 29.0 40.0 8.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 2.0 11 9.0 12 6.0 13 10.0 14 16.0 15 26.0 16 61.0 17 99.0 18 189.0 19 316.0 20 615.0 21 975.0 22 1578.0 23 2729.0 24 5226.0 25 10854.0 26 18909.0 27 22416.0 28 19926.0 29 16262.0 30 13176.0 31 12375.0 32 13149.0 33 16634.0 34 30543.0 35 43197.0 36 39119.0 37 53944.0 38 99968.0 39 104129.0 40 51.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.57203173343007 18.12364793897943 20.024462926700487 32.27985740089001 2 46.36199433630067 19.213273796748787 19.975271171922333 14.449460695028213 3 23.827232479473363 18.94775227867984 43.47050678903195 13.75450845281485 4 23.205403115984282 19.89303167455191 42.3937961410113 14.507769068452511 5 18.831705320496628 22.27721738007373 42.898438968986405 15.992638330443237 6 19.951529977531337 24.932432560763214 42.008429073656586 13.107608388048872 7 60.555240061461205 4.855359147292269 29.45617470480199 5.133226086444537 8 60.28762931828585 3.799730679890829 29.583237577182626 6.329402424640701 9 55.887531314635396 5.434644290432678 32.02022369903003 6.65760069590189 10 30.716167373521163 18.969024388854177 38.78589431179975 11.528913925824911 11 22.66999170007844 19.587435020350952 41.847558740463164 15.895014539107443 12 20.93080676377132 17.547401668721072 45.84329672124609 15.67849484626152 13 17.51986188322751 21.871907709430573 46.100271409334276 14.50795899800764 14 14.370260070539837 24.05685731162312 43.827384423117465 17.745498194719577 15 12.140866952447338 21.41265804513106 50.97595301902524 15.470521983396356 16 13.734755779081539 21.25976475325302 46.79294449688611 18.212534970779338 17 14.328285638856547 20.456172805506437 43.35445983084874 21.861081724788274 18 15.440323184131005 20.756641361718938 47.12703058435626 16.676004869793793 19 16.134705637678984 20.83071388821886 44.00249947294548 19.03208100115667 20 17.075426724227984 21.99289283604711 44.175905156777354 16.755775282947553 21 16.559578052500328 22.345022231254426 45.01159519934056 16.083804516904678 22 15.014501121534025 21.3328876319773 42.097316105456486 21.55529514103219 23 13.797052673163524 21.509142259136084 43.78047182300085 20.91333324469954 24 16.82377006368338 19.203777318992383 44.61122369713074 19.3612289201935 25 13.957923006356943 21.90134679047541 43.34173455065516 20.798995652512485 26 13.615669948016281 22.3210911073083 42.861022846626184 21.202216098049234 27 15.408984807534884 21.98092727407405 42.95978621529275 19.65030170309832 28 12.604295066959665 20.490739984539736 46.62656620659397 20.278398741906628 29 15.07091019940704 18.52895760962259 44.13070192265688 22.269430268313485 30 15.93527960479458 19.949440752424927 43.99490229074036 20.120377352040126 31 15.933190379688172 23.495235617109614 40.767049501339955 19.804524501862257 32 17.3753254917751 24.132449274564063 38.16273544142478 20.32948979223606 33 16.224922176364785 22.443025881700475 38.833566630136886 22.498485311797854 34 15.172142652290265 23.973288307366797 38.64914503210759 22.205424008235344 35 16.108305429516193 24.790555183082592 34.549705514224776 24.55143387317644 36 17.72365629587986 24.10908793928332 34.988062927460206 23.17919283737662 37 17.015598914362663 25.547614389822815 36.94300783839274 20.49377885742178 38 17.305431415487995 27.21158722229925 34.460438623314616 21.022542738898142 39 19.04841494289768 24.435766774103485 35.933912111997664 20.581906171001176 40 18.973012909511862 24.741743287414696 35.513408076944266 20.77183572612918 41 16.118751555048235 26.324806129406603 31.98128814022879 25.57515417531637 42 18.332000660954854 23.82647276125285 32.47263589934493 25.368890678447364 43 20.683898342104914 22.662014658763066 33.03862597362638 23.615461025505642 44 18.435892127609872 23.04111405079856 34.04696198180095 24.476031839790622 45 19.11963852607068 23.32069035594698 32.66674390468575 24.892927213296588 46 19.689807050564944 23.93967077610914 35.03098700691913 21.33953516640678 47 15.828159335702388 23.85610177185282 37.341859904161545 22.973878988283243 48 16.562996784492633 21.953007629470232 36.02621787578987 25.45777771024727 49 17.805705863695156 19.822377880044293 38.90308084731373 23.468835408946823 50 18.148148851590946 20.739927560867674 37.0499381779298 24.061985409611573 51 16.369648497372324 21.331748054646532 33.59416992237579 28.704433525605356 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 420.0 1 451.5 2 483.0 3 15137.5 4 29792.0 5 20310.0 6 10828.0 7 10771.5 8 10715.0 9 11000.0 10 11285.0 11 11255.5 12 11226.0 13 10520.0 14 9814.0 15 9119.0 16 8424.0 17 7736.0 18 7048.0 19 6409.5 20 5771.0 21 5278.0 22 4785.0 23 4396.0 24 4007.0 25 4158.0 26 4554.0 27 4799.0 28 4882.0 29 4965.0 30 5443.0 31 5921.0 32 6398.0 33 6875.0 34 7775.5 35 8676.0 36 9498.5 37 10321.0 38 11559.0 39 12797.0 40 15051.0 41 17305.0 42 21012.0 43 24719.0 44 29407.5 45 34096.0 46 39564.5 47 45033.0 48 52644.5 49 60256.0 50 58239.5 51 56223.0 52 45798.0 53 35373.0 54 29251.0 55 23129.0 56 19397.5 57 15666.0 58 13614.5 59 11563.0 60 10534.0 61 9505.0 62 8094.5 63 6684.0 64 5974.0 65 5264.0 66 4459.5 67 3655.0 68 2732.0 69 1809.0 70 1504.5 71 1200.0 72 1061.0 73 922.0 74 656.5 75 314.5 76 238.0 77 180.5 78 123.0 79 87.0 80 51.0 81 35.0 82 19.0 83 16.0 84 13.0 85 12.0 86 11.0 87 6.0 88 1.0 89 0.5 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 526511.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.32796468869844 #Duplication Level Percentage of deduplicated Percentage of total 1 75.83305822293272 28.306937195816456 2 10.690159683351261 7.980838063533673 3 4.218729470548492 4.724297541234168 4 2.1377781708214685 3.191956322907765 5 1.2647374862789125 2.3605038114146235 6 0.7643354411781159 1.7118651815170471 7 0.5550050018889611 1.4502044978793505 8 0.40788050014079097 1.2180279125171285 9 0.31965925646123855 1.0739006493840642 >10 3.387359802420018 29.744935474765104 >50 0.3642247151632669 8.402842679790327 >100 0.05084618530768882 3.4061076868523594 >500 0.002594193127943307 0.5982524958598362 >1k 0.003113031753531968 2.61960610521209 >5k 0.0 0.0 >10k+ 5.188386255886614E-4 3.2097243813159815 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 16573 3.1477025171363944 No Hit GCTGTCTCTTATACACATCTGACGCCCTGTAACTCGTATGCCGTCTTCTGC 3844 0.7300892099120436 Illumina PCR Primer Index 2 (95% over 24bp) CCTGTCTCTTATACACATCTGACGCCCTGTAACTCGTATGCCGTCTTCTGC 3681 0.6991306924261791 Illumina PCR Primer Index 2 (95% over 24bp) CTGTCTCTTATACACATCTGACGCCCTGTAACTCGTATGCCGTCTTCTGCT 2118 0.40227079776111047 Illumina PCR Primer Index 2 (96% over 25bp) TCTGTCTCTTATACACATCTGACGCCCTGTAACTCGTATGCCGTCTTCTGC 1666 0.31642263884325306 Illumina PCR Primer Index 2 (95% over 24bp) CGCTGTCTCTTATACACATCTGACGCCCTGTAACTCGTATGCCGTCTTCTG 1154 0.21917870661771552 Illumina PCR Primer Index 2 (95% over 23bp) ACTGTCTCTTATACACATCTGACGCCCTGTAACTCGTATGCCGTCTTCTGC 1063 0.2018951171010672 Illumina PCR Primer Index 2 (95% over 24bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCCTGTAACTCGTATGCC 761 0.1445363914524103 No Hit GCCTGTCTCTTATACACATCTGACGCCCTGTAACTCGTATGCCGTCTTCTG 643 0.12212470394730596 Illumina PCR Primer Index 2 (95% over 23bp) AGCTGTCTCTTATACACATCTGACGCCCTGTAACTCGTATGCCGTCTTCTG 606 0.11509731040756983 Illumina PCR Primer Index 2 (95% over 23bp) ACCTGTCTCTTATACACATCTGACGCCCTGTAACTCGTATGCCGTCTTCTG 558 0.10598069176142569 Illumina PCR Primer Index 2 (95% over 23bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.8992955512800303E-4 0.0 0.0 0.43133001969569484 0.0 2 1.8992955512800303E-4 0.0 0.0 2.5232141398755203 0.0 3 1.8992955512800303E-4 0.0 0.0 3.52091409296292 0.0 4 1.8992955512800303E-4 0.0 0.0 4.465813629724735 0.0 5 1.8992955512800303E-4 0.0 0.0 6.9616779136618225 0.0 6 1.8992955512800303E-4 0.0 0.0 8.141710239672106 0.0 7 1.8992955512800303E-4 0.0 0.0 9.454123465606607 0.0 8 1.8992955512800303E-4 0.0 0.0 11.395583378125053 0.0 9 1.8992955512800303E-4 0.0 0.0 12.059956961962808 0.0 10 1.8992955512800303E-4 0.0 0.0 13.48063003432027 0.0 11 1.8992955512800303E-4 0.0 0.0 15.681913578253825 0.0 12 1.8992955512800303E-4 0.0 0.0 17.41350133235583 0.0 13 1.8992955512800303E-4 0.0 0.0 18.081483577741015 0.0 14 1.8992955512800303E-4 0.0 0.0 18.309778903004876 0.0 15 1.8992955512800303E-4 0.0 0.0 18.79219997303 0.0 16 1.8992955512800303E-4 0.0 0.0 19.80756337474431 0.0 17 1.8992955512800303E-4 0.0 0.0 21.046283933289143 0.0 18 1.8992955512800303E-4 0.0 0.0 22.49981481868375 0.0 19 1.8992955512800303E-4 0.0 0.0 23.28954190890599 0.0 20 1.8992955512800303E-4 0.0 0.0 24.028747737464176 0.0 21 1.8992955512800303E-4 0.0 0.0 24.845444824514587 0.0 22 1.8992955512800303E-4 0.0 0.0 25.70981422990213 0.0 23 1.8992955512800303E-4 0.0 0.0 26.617677503413983 0.0 24 1.8992955512800303E-4 0.0 0.0 27.247293978663315 0.0 25 1.8992955512800303E-4 0.0 0.0 27.80967539139733 0.0 26 1.8992955512800303E-4 0.0 0.0 28.328942795117293 0.0 27 1.8992955512800303E-4 0.0 0.0 28.821999920229587 0.0 28 3.7985911025600606E-4 0.0 0.0 29.315436904452138 0.0 29 3.7985911025600606E-4 0.0 0.0 29.824827971305442 0.0 30 3.7985911025600606E-4 0.0 0.0 30.40791170554841 0.0 31 5.697886653840091E-4 0.0 0.0 30.93572593924913 0.0 32 5.697886653840091E-4 0.0 0.0 31.43068235991271 0.0 33 5.697886653840091E-4 0.0 0.0 31.900758008854517 0.0 34 5.697886653840091E-4 0.0 0.0 32.382989149324516 0.0 35 5.697886653840091E-4 0.0 0.0 32.92181929722266 0.0 36 7.597182205120121E-4 0.0 0.0 33.35371910558374 0.0 37 7.597182205120121E-4 0.0 0.0 33.80347229212685 0.0 38 9.496477756400151E-4 0.0 0.0 34.27240836373789 0.0 39 9.496477756400151E-4 0.0 0.0 34.694431835232315 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGAC 25 3.8879152E-5 45.000004 25 CAGCGCA 20 7.0297986E-4 45.000004 28 AACCGAG 20 7.0297986E-4 45.000004 40 CGTATAG 20 7.0297986E-4 45.000004 14 CGACGGT 25 3.8879152E-5 45.000004 28 CTATACG 20 7.0297986E-4 45.000004 1 GGCGTAT 20 7.0297986E-4 45.000004 1 GAATCGT 25 3.8879152E-5 45.000004 8 ACCGAAC 20 7.0297986E-4 45.000004 22 CGCTGCG 20 7.0297986E-4 45.000004 45 CCTAAGG 20 7.0297986E-4 45.000004 2 ACGGGCC 20 7.0297986E-4 45.000004 5 TAGTTCG 20 7.0297986E-4 45.000004 21 ACGATTG 20 7.0297986E-4 45.000004 1 AGACGAT 20 7.0297986E-4 45.000004 39 CTAACGT 20 7.0297986E-4 45.000004 38 CTTATCA 20 7.0297986E-4 45.000004 30 AGGTTCG 25 3.8879152E-5 45.000004 1 CGCTAAG 20 7.0297986E-4 45.000004 1 GCTTACG 20 7.0297986E-4 45.000004 1 >>END_MODULE