SRR2934885.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934885.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1198386
Sequences flagged as poor quality	0
Sequence length	51
%GC	38

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	49130	4.099680737258279	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGC	4551	0.37976077824674187	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCG	4278	0.3569801382859947	No Hit
GCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCTGC	3593	0.2998199244650722	No Hit
GAATCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTC	3216	0.2683609454716594	No Hit
CCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCTGC	2437	0.20335684829428913	No Hit
CTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCTGCT	1554	0.12967441208425334	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTACCGA	20	7.0334063E-4	45.000004	11
CGTATCG	20	7.0334063E-4	45.000004	12
GGTCGTA	20	7.0334063E-4	45.000004	9
TCTAGCG	20	7.0334063E-4	45.000004	1
TGCATCG	20	7.0334063E-4	45.000004	15
TACGCGA	20	7.0334063E-4	45.000004	2
CGCTCGT	20	7.0334063E-4	45.000004	42
TACGATT	20	7.0334063E-4	45.000004	40
AACGCAT	20	7.0334063E-4	45.000004	14
TCGAGTA	20	7.0334063E-4	45.000004	26
ACGTACG	20	7.0334063E-4	45.000004	1
CGGTATG	20	7.0334063E-4	45.000004	1
CGTCCTA	20	7.0334063E-4	45.000004	22
TCGGTAC	20	7.0334063E-4	45.000004	16
CCCGCGA	20	7.0334063E-4	45.000004	29
TACGTAG	20	7.0334063E-4	45.000004	1
CGGACTA	20	7.0334063E-4	45.000004	6
TATAGCG	50	2.1827873E-11	45.0	1
TATCGTG	45	3.8562575E-10	45.0	1
CGTTTTT	30875	0.0	44.511738	1