##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934884.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 574664 Sequences flagged as poor quality 0 Sequence length 51 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.29442770036056 33.0 31.0 34.0 30.0 34.0 2 32.484758049921346 34.0 31.0 34.0 31.0 34.0 3 32.57302876115435 34.0 31.0 34.0 31.0 34.0 4 36.0363673381315 37.0 35.0 37.0 35.0 37.0 5 35.88387823145351 37.0 35.0 37.0 35.0 37.0 6 35.87075752091657 37.0 35.0 37.0 35.0 37.0 7 36.08248298135954 37.0 35.0 37.0 35.0 37.0 8 36.06613255745966 37.0 35.0 37.0 35.0 37.0 9 37.89135738448903 39.0 38.0 39.0 35.0 39.0 10 37.38186662119082 39.0 37.0 39.0 34.0 39.0 11 37.228265560397034 39.0 37.0 39.0 34.0 39.0 12 37.18433206186572 39.0 37.0 39.0 34.0 39.0 13 37.08876143276767 39.0 37.0 39.0 33.0 39.0 14 38.208565352971476 40.0 37.0 41.0 33.0 41.0 15 38.27665905642254 40.0 37.0 41.0 33.0 41.0 16 38.403084237049825 40.0 37.0 41.0 34.0 41.0 17 38.43573810087286 40.0 37.0 41.0 34.0 41.0 18 38.06819463199365 39.0 37.0 40.0 34.0 41.0 19 37.69402642239639 38.0 37.0 40.0 34.0 41.0 20 37.209712110032996 38.0 35.0 40.0 34.0 41.0 21 37.133110826500356 38.0 35.0 40.0 34.0 41.0 22 36.95433505491905 38.0 35.0 40.0 33.0 41.0 23 36.81273230966269 38.0 35.0 40.0 33.0 41.0 24 36.594420391741956 37.0 35.0 40.0 33.0 41.0 25 36.47514025587126 37.0 35.0 40.0 33.0 41.0 26 36.67463248089318 38.0 35.0 40.0 33.0 41.0 27 36.71529102223212 38.0 35.0 40.0 33.0 41.0 28 36.65647752425765 38.0 35.0 40.0 33.0 41.0 29 36.62780337727785 38.0 35.0 40.0 33.0 41.0 30 36.27447169128395 38.0 35.0 40.0 32.0 41.0 31 35.82593828741665 38.0 35.0 40.0 31.0 41.0 32 35.25966129773224 38.0 35.0 40.0 27.0 41.0 33 34.433985772555786 38.0 34.0 40.0 21.0 41.0 34 33.83181650494898 38.0 34.0 40.0 15.0 41.0 35 33.4530421254855 38.0 33.0 40.0 12.0 41.0 36 33.242861915832556 38.0 33.0 40.0 10.0 41.0 37 33.0548999067281 37.0 33.0 40.0 10.0 41.0 38 32.8863649019253 37.0 33.0 40.0 10.0 41.0 39 32.863504587028245 37.0 33.0 40.0 10.0 41.0 40 32.73586478359528 37.0 33.0 40.0 10.0 41.0 41 32.654478095025965 37.0 32.0 40.0 10.0 41.0 42 32.55787729873457 37.0 32.0 40.0 8.0 41.0 43 32.44020505895619 37.0 32.0 40.0 8.0 41.0 44 32.241301003716956 37.0 31.0 40.0 8.0 41.0 45 32.17389465844389 37.0 31.0 40.0 8.0 41.0 46 32.05295094176771 36.0 31.0 40.0 8.0 41.0 47 31.989903665446242 36.0 31.0 40.0 8.0 41.0 48 31.971557292609248 36.0 31.0 40.0 8.0 41.0 49 31.87200520652068 36.0 31.0 40.0 8.0 41.0 50 31.722340358887976 36.0 30.0 40.0 8.0 41.0 51 30.950872161819778 35.0 28.0 39.0 8.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 2.0 10 5.0 11 3.0 12 4.0 13 7.0 14 10.0 15 22.0 16 40.0 17 86.0 18 183.0 19 383.0 20 635.0 21 1005.0 22 1683.0 23 3033.0 24 5645.0 25 11656.0 26 20368.0 27 24661.0 28 21661.0 29 17178.0 30 14264.0 31 13874.0 32 15094.0 33 19466.0 34 33952.0 35 48579.0 36 47748.0 37 63332.0 38 110563.0 39 99469.0 40 51.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.33703172636532 17.50605571255551 20.537740314340205 31.619172246738962 2 45.29063939971879 19.981937271170633 20.19667144627121 14.530751882839363 3 22.671508916514693 18.773230966268986 44.7343143123634 13.820945804852922 4 22.88084863502847 19.52932496206479 43.37386716411677 14.21595923878997 5 19.16267592889062 22.595638494842206 42.726184344242895 15.51550123202428 6 19.538895772138154 25.016183369760412 41.38522684560021 14.059694012501216 7 59.569417955535755 4.536041930589005 30.69950440605293 5.195035707822311 8 58.87927554188187 4.168000779585984 30.131868361338103 6.820855317194047 9 55.066438823382015 4.96481422187574 32.272597552656855 7.696149402085392 10 30.889006445505547 18.170617961104227 38.85783692731753 12.082538666072697 11 22.229163476396643 19.12195648239667 42.327168571547894 16.32171146965879 12 20.212854816031626 17.00645942672588 46.11964556680078 16.66104019044172 13 16.730124037698552 21.46106246432698 47.14128603845029 14.667527459524173 14 13.492231982515 24.901507663608648 44.36383695515988 17.24242339871647 15 12.107248757534837 20.790757729734246 51.43231523116116 15.669678281569752 16 12.65539515264572 20.986350284688097 47.59320228864171 18.765052274024473 17 12.968969693594865 20.345280024501275 43.84857934375566 22.837170938148205 18 14.177675998496515 19.658617905419515 48.741873512174074 17.421832583909904 19 15.545257750616011 20.604387955396543 44.365751117174554 19.484603176812882 20 17.180648170061115 21.947781660239723 44.85856082858854 16.01300934111063 21 16.044157977531217 22.45538262358526 45.455257332980665 16.04520206590286 22 14.551111606086339 20.88298553589576 42.295149861484276 22.270752996533627 23 13.292289059345983 22.095346150098145 43.67091030584829 20.941454484707585 24 16.233660016983837 19.74614731390865 44.65652972867623 19.36366294043128 25 13.237474419834893 22.356194228279485 43.48819484081133 20.918136511074298 26 15.596766110283575 21.509438558879623 43.90113179179485 18.992663539041946 27 18.275722857182632 22.874584104798632 42.20605432043768 16.643638717581055 28 13.339621065526986 22.445637798783288 45.039884175796644 19.174856959893084 29 18.42502749432712 19.129439115726754 43.993011568499156 18.452521821446968 30 19.189300182367436 21.141745437333817 42.92699734105494 16.7419570392438 31 18.329667423050687 23.93241963999833 40.655061044366796 17.082851892584188 32 21.51831331003856 24.9055100023666 36.85510141578383 16.721075271811007 33 18.731989475589213 22.66959475450002 37.74727492935002 20.851140840560745 34 17.28662313978255 23.036591817131402 39.14391714114683 20.53286790193922 35 19.507399106260355 23.690017123049294 34.93397881196664 21.868604958723704 36 21.958570573413333 23.581431932398758 35.200917405649214 19.259080088538695 37 19.339126863697743 25.6064413291941 37.545069814709116 17.509361992399036 38 17.290625478540502 28.54659418373171 33.47086297384211 20.69191736388568 39 18.9757841103671 23.509389834755616 37.6179819859953 19.89684406888199 40 20.09713502150822 22.341576991076526 38.125408934612224 19.435879052803028 41 18.187323375050465 24.955452229476702 32.73425862765024 24.12296576782259 42 20.185186474183176 23.70359027188061 32.94934083220804 23.161882421728176 43 22.703875656035528 22.87214789859814 32.45009257583562 21.973883869530717 44 19.19469463895424 23.801386549357538 33.72944886055156 23.274469951136663 45 19.878572522378292 22.56535993206465 33.86274414266423 23.693323402892823 46 21.781423579691786 22.808284493199505 35.70225383876491 19.708038088343795 47 16.39984408280317 22.839259114891483 39.118336976041654 21.642559826263692 48 17.755766848106024 21.39772110311417 36.77696880263945 24.069543246140356 49 19.137269778514053 19.278743752871243 39.535102251054525 22.048884217560175 50 19.01719961577548 19.73414029763479 37.50121810310025 23.74744198348948 51 17.15611209332758 20.204328094329902 34.35433575097796 28.285224061364556 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 560.0 1 544.5 2 529.0 3 16776.5 4 33024.0 5 22278.5 6 11533.0 7 11364.0 8 11195.0 9 11580.0 10 11965.0 11 11925.5 12 11886.0 13 11400.0 14 10914.0 15 10120.0 16 9326.0 17 8473.0 18 7620.0 19 6936.5 20 6253.0 21 5735.5 22 5218.0 23 4849.0 24 4480.0 25 4365.5 26 4202.0 27 4153.0 28 4729.0 29 5305.0 30 5948.0 31 6591.0 32 7101.0 33 7611.0 34 8140.0 35 8669.0 36 9834.0 37 10999.0 38 11772.5 39 12546.0 40 15805.5 41 19065.0 42 22836.5 43 26608.0 44 32379.5 45 38151.0 46 47677.5 47 57204.0 48 63508.0 49 69812.0 50 68376.0 51 66940.0 52 52751.5 53 38563.0 54 31223.0 55 23883.0 56 19314.5 57 14746.0 58 12696.0 59 10646.0 60 9555.0 61 8464.0 62 7284.5 63 6105.0 64 5050.5 65 3996.0 66 3332.5 67 2669.0 68 2075.5 69 1482.0 70 1091.5 71 701.0 72 607.5 73 514.0 74 356.0 75 178.0 76 158.0 77 104.0 78 50.0 79 51.0 80 52.0 81 32.0 82 12.0 83 12.0 84 12.0 85 7.0 86 2.0 87 1.5 88 1.0 89 1.0 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 574664.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.07650072024032 #Duplication Level Percentage of deduplicated Percentage of total 1 73.58369345015852 26.54642169752587 2 11.077935366023064 7.993062864222137 3 4.851445277025851 5.2506950709248885 4 2.534243347005876 3.657065277340869 5 1.5457268168655647 2.7882207310972658 6 1.0197199181019765 2.2072755815909613 7 0.6603746188199138 1.667680378803953 8 0.5012202444995563 1.4465818009349813 9 0.3944843818593886 1.2808454477646412 >10 3.4434167678302154 27.751177666856297 >50 0.31657237799701904 7.191046340615532 >100 0.06331447559926671 4.339204708529663 >500 0.002944859330198452 0.776084805251184 >1k 0.004417288995297678 3.585430349425331 >5k 0.0 0.0 >10k+ 4.908098883664087E-4 3.519207279116423 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 19875 3.4585427310567565 No Hit GCTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCCGTCTTCTGC 4880 0.8491918756003507 No Hit CCTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCCGTCTTCTGC 4674 0.8133448415073852 No Hit CTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCCGTCTTCTGCT 2506 0.4360809098882129 TruSeq Adapter, Index 27 (95% over 23bp) TCTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCCGTCTTCTGC 2041 0.35516406108613036 No Hit CGCTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCCGTCTTCTG 1512 0.2631102696532234 TruSeq Adapter, Index 27 (95% over 21bp) ACTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCCGTCTTCTGC 1294 0.22517505881697827 TruSeq Adapter, Index 27 (95% over 22bp) GAATGATACCTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCCG 1143 0.19889883479737724 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGC 1124 0.1955925549538513 No Hit GAATCTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCCGTCTTC 1075 0.18706583325212645 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCC 982 0.17088246349170993 No Hit GCCTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCCGTCTTCTG 866 0.15069675497334095 No Hit AGCTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCCGTCTTCTG 690 0.12007016273857418 TruSeq Adapter, Index 27 (95% over 21bp) ACCTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCCGTCTTCTG 689 0.11989614800996756 TruSeq Adapter, Index 27 (95% over 21bp) CGTTCTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCCGTCTTC 628 0.10928124956496318 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.46183508972199405 0.0 2 0.0 0.0 0.0 2.8521014018626536 0.0 3 0.0 0.0 0.0 3.9833711525343505 0.0 4 0.0 0.0 0.0 5.013886375342809 0.0 5 0.0 0.0 0.0 7.834143081870449 0.0 6 0.0 0.0 0.0 9.054160344131528 0.0 7 0.0 0.0 0.0 10.547206715576406 0.0 8 0.0 0.0 0.0 12.67958319992204 0.0 9 0.0 0.0 0.0 13.440027563933011 0.0 10 0.0 0.0 0.0 15.310859911182883 0.0 11 0.0 0.0 0.0 17.875314966658777 0.0 12 0.0 0.0 0.0 19.965231857224396 0.0 13 0.0 0.0 0.0 20.73281082510824 0.0 14 1.7401472860662927E-4 0.0 0.0 21.01558475909401 0.0 15 1.7401472860662927E-4 0.0 0.0 21.59070343713892 0.0 16 1.7401472860662927E-4 0.0 0.0 22.81263486141467 0.0 17 1.7401472860662927E-4 0.0 0.0 24.281145156126016 0.0 18 1.7401472860662927E-4 0.0 0.0 26.02407667785001 0.0 19 1.7401472860662927E-4 0.0 0.0 27.01752676346526 0.0 20 5.220441858198878E-4 0.0 0.0 27.825303133657233 0.0 21 5.220441858198878E-4 0.0 0.0 28.81614299834338 0.0 22 5.220441858198878E-4 0.0 0.0 29.89868862500522 0.0 23 5.220441858198878E-4 0.0 0.0 31.001767989642644 0.0 24 5.220441858198878E-4 0.0 0.0 31.83773474586889 0.0 25 5.220441858198878E-4 0.0 0.0 32.521612629292946 0.0 26 5.220441858198878E-4 0.0 0.0 33.170861581724274 0.0 27 5.220441858198878E-4 0.0 0.0 33.772604513246 0.0 28 5.220441858198878E-4 0.0 0.0 34.36286247267969 0.0 29 5.220441858198878E-4 0.0 0.0 35.00776105689586 0.0 30 5.220441858198878E-4 0.0 0.0 35.70033967675024 0.0 31 5.220441858198878E-4 0.0 0.0 36.350980747010425 0.0 32 5.220441858198878E-4 0.0 0.0 36.93201592582796 0.0 33 5.220441858198878E-4 0.0 0.0 37.50052204418582 0.0 34 5.220441858198878E-4 0.0 0.0 38.066243926885974 0.0 35 5.220441858198878E-4 0.0 0.0 38.70835827544443 0.0 36 5.220441858198878E-4 0.0 0.0 39.286435203875655 0.0 37 5.220441858198878E-4 0.0 0.0 39.80325894783734 0.0 38 5.220441858198878E-4 0.0 0.0 40.29972296855206 0.0 39 5.220441858198878E-4 0.0 0.0 40.788182311750866 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGTCA 70 0.0 45.000004 6 AGGGTTA 35 1.210501E-7 45.000004 6 TACGGGT 35 1.210501E-7 45.000004 4 CGTTCGG 30 2.1635988E-6 45.000004 2 TTGCGAG 35 1.210501E-7 45.000004 1 AGCGAAA 30 2.1635988E-6 45.000004 19 TAGGCTA 30 2.1635988E-6 45.000004 24 ATAACGG 35 1.210501E-7 45.000004 2 TGTGTCG 35 1.210501E-7 45.000004 1 TATCGAG 30 2.1635988E-6 45.000004 1 GCGTAAG 30 2.1635988E-6 45.000004 1 GTTATCC 30 2.1635988E-6 45.000004 12 GATAGGC 30 2.1635988E-6 45.000004 22 CTAGCGA 30 2.1635988E-6 45.000004 17 GTTGATC 55 1.8189894E-12 45.0 16 CTTCGGA 20 7.0303393E-4 45.0 34 TAGAGTC 25 3.8883627E-5 45.0 13 TAATACG 45 3.8380676E-10 45.0 1 GATACGA 20 7.0303393E-4 45.0 29 GCCCATC 20 7.0303393E-4 45.0 21 >>END_MODULE