SRR2934882.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934882.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	695090
Sequences flagged as poor quality	0
Sequence length	51
%GC	37

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	32070	4.61379101986793	No Hit
CCTGTCTCTTATACACATCTGACGCTCAGTGTGTCGTATGCCGTCTTCTGC	2484	0.3573637946165245	TruSeq Adapter, Index 14 (95% over 21bp)
GCTGTCTCTTATACACATCTGACGCTCAGTGTGTCGTATGCCGTCTTCTGC	1757	0.25277302219856423	TruSeq Adapter, Index 14 (95% over 21bp)
CTGTCTCTTATACACATCTGACGCTCAGTGTGTCGTATGCCGTCTTCTGCT	1240	0.1783941647844164	TruSeq Adapter, Index 15 (95% over 22bp)
CGCTGTCTCTTATACACATCTGACGCTCAGTGTGTCGTATGCCGTCTTCTG	922	0.13264469349292898	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA	789	0.1135104806571811	No Hit
GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA	783	0.11264728308564359	No Hit
TCTGTCTCTTATACACATCTGACGCTCAGTGTGTCGTATGCCGTCTTCTGC	762	0.10962609158526235	TruSeq Adapter, Index 14 (95% over 21bp)
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTCAGTGTGTCGTATGCC	739	0.10631716756103525	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA	719	0.10343984232257693	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA	705	0.10142571465565611	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACCGGGA	35	1.2109922E-7	45.000004	4
TTGTGCG	65	0.0	45.000004	1
CGGTCTA	30	2.1642572E-6	45.000004	31
TAGCTAG	60	0.0	45.000004	1
CAACGCG	20	7.03136E-4	45.0	17
CGTAGCT	20	7.03136E-4	45.0	38
GAAGTAC	20	7.03136E-4	45.0	45
ACGTCAT	20	7.03136E-4	45.0	22
AGTTACG	20	7.03136E-4	45.0	1
TTACGGT	20	7.03136E-4	45.0	35
CCGCGAA	20	7.03136E-4	45.0	32
TAAGCGT	20	7.03136E-4	45.0	16
CGTTTTT	19815	0.0	44.40954	1
TACGGGT	75	0.0	42.000004	4
ACAACGG	65	0.0	41.538464	2
GTTTTTT	21990	0.0	40.21146	2
TGCACGG	40	3.4555887E-7	39.375	2
TCGTGTC	35	6.2447252E-6	38.57143	32
CTACGAA	95	0.0	37.894737	11
TACGAAT	95	0.0	37.894737	12