##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934881.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2418850 Sequences flagged as poor quality 0 Sequence length 51 %GC 37 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.75086632077227 34.0 31.0 34.0 31.0 34.0 2 32.89197800607727 34.0 31.0 34.0 31.0 34.0 3 32.926844574901295 34.0 33.0 34.0 31.0 34.0 4 36.296124191247905 37.0 37.0 37.0 35.0 37.0 5 36.19188870744362 37.0 37.0 37.0 35.0 37.0 6 36.19270810509126 37.0 37.0 37.0 35.0 37.0 7 36.30255203919218 37.0 37.0 37.0 35.0 37.0 8 36.322604130061805 37.0 37.0 37.0 35.0 37.0 9 38.102194017818384 39.0 39.0 39.0 37.0 39.0 10 37.75625317816318 39.0 38.0 39.0 35.0 39.0 11 37.61013787543668 39.0 37.0 39.0 35.0 39.0 12 37.558348388697105 39.0 37.0 39.0 35.0 39.0 13 37.57378588998905 39.0 37.0 39.0 35.0 39.0 14 38.93387105442669 40.0 38.0 41.0 35.0 41.0 15 38.957580668499496 41.0 38.0 41.0 35.0 41.0 16 39.01808007937656 41.0 38.0 41.0 35.0 41.0 17 38.99790437604647 41.0 38.0 41.0 35.0 41.0 18 38.45620191413275 39.0 38.0 41.0 35.0 41.0 19 37.949282510283815 38.0 37.0 41.0 35.0 41.0 20 37.36675196891085 38.0 35.0 41.0 34.0 41.0 21 37.309605390991585 38.0 35.0 41.0 34.0 41.0 22 37.13160510159787 38.0 35.0 41.0 34.0 41.0 23 37.037817557930424 38.0 35.0 41.0 34.0 41.0 24 36.86319738718813 38.0 35.0 40.0 33.0 41.0 25 36.71560948384563 37.0 35.0 40.0 33.0 41.0 26 36.838116460301386 38.0 35.0 40.0 33.0 41.0 27 36.851415755420966 38.0 35.0 40.0 34.0 41.0 28 36.77099985530314 38.0 35.0 40.0 33.0 41.0 29 36.61776050602559 38.0 35.0 40.0 33.0 41.0 30 36.31809413564297 38.0 35.0 41.0 33.0 41.0 31 35.817412820141804 38.0 35.0 41.0 31.0 41.0 32 35.06616449965893 38.0 35.0 41.0 23.0 41.0 33 34.068937304917625 38.0 34.0 41.0 16.0 41.0 34 33.233623416086154 38.0 33.0 41.0 12.0 41.0 35 32.70873431589391 38.0 33.0 41.0 10.0 41.0 36 32.43679310416107 38.0 31.0 41.0 8.0 41.0 37 32.1918577009736 37.0 31.0 41.0 8.0 41.0 38 32.05125824255328 37.0 30.0 41.0 7.0 41.0 39 31.976902660355126 37.0 30.0 41.0 7.0 41.0 40 31.8672216135767 37.0 29.0 40.0 7.0 41.0 41 31.718929243235422 37.0 29.0 40.0 7.0 41.0 42 31.587508940198855 37.0 28.0 40.0 7.0 41.0 43 31.48118651425264 37.0 27.0 40.0 7.0 41.0 44 31.3822221303512 36.0 26.0 40.0 7.0 41.0 45 31.340027699113215 36.0 25.0 40.0 7.0 41.0 46 31.311935010438845 36.0 25.0 40.0 7.0 41.0 47 31.325173946296793 36.0 26.0 40.0 7.0 41.0 48 31.26775451144139 35.0 25.0 40.0 7.0 41.0 49 31.134494491183826 35.0 26.0 40.0 7.0 41.0 50 31.066997126733778 35.0 25.0 40.0 7.0 41.0 51 30.55435186142175 35.0 24.0 40.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 4.0 8 8.0 9 23.0 10 34.0 11 21.0 12 37.0 13 41.0 14 69.0 15 125.0 16 225.0 17 466.0 18 902.0 19 1590.0 20 2788.0 21 4556.0 22 6719.0 23 11504.0 24 22225.0 25 49188.0 26 92743.0 27 124223.0 28 120233.0 29 97749.0 30 75584.0 31 64568.0 32 59505.0 33 67696.0 34 120974.0 35 145202.0 36 160715.0 37 199251.0 38 382327.0 39 607108.0 40 447.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 27.637224300804103 15.4081485003204 18.294189387518863 38.66043781135664 2 51.97159807346466 18.097153606052462 17.753064472786654 12.17818384769622 3 22.77731153233975 17.58459598569568 47.271513322446616 12.366579159517952 4 21.051326043367716 18.832172313289373 46.63596337102342 13.480538272319489 5 18.87607747483308 21.748434173264155 45.36486346817703 14.010624883725736 6 19.85273993840048 24.49705438534841 44.43487607747483 11.215329598776277 7 58.96533476652128 4.503503731111892 33.000475432540256 3.5306860698265705 8 60.5872212001571 3.8493912396386714 32.668788887281146 2.8945986729230833 9 55.704032908200176 5.920085991276847 34.076069206441076 4.299811894081898 10 29.87291481489137 21.96920023978337 38.606362527647434 9.551522417677823 11 22.250987039295534 18.037290447940137 46.05882960911177 13.65289290365256 12 21.296773260020256 16.271492651466605 47.843768733075635 14.587965355437502 13 18.753167827686713 16.481675176220104 48.90038654732621 15.864770448766977 14 15.265890815883582 18.43392521239432 49.01291936250698 17.28726460921512 15 15.24720424995349 19.238357070508712 50.592182235359786 14.92225644417802 16 17.747359282303574 19.07964528598301 49.02325485251256 14.14974057920086 17 17.41860801620605 19.138433553134753 47.66116129565703 15.78179713500217 18 17.303511999503897 19.56272608884387 47.964900675941045 15.168861235711184 19 18.20253426214937 20.24619137193294 46.585567521756204 14.965706844161481 20 19.403063439237656 19.651156541331623 47.090683589308966 13.855096430121753 21 18.862765363705893 19.81470533517994 47.18585278128036 14.136676519833804 22 18.046344337185026 18.643280897947374 47.37817557930421 15.932199185563386 23 17.71469913388594 18.812576224238793 48.086446038406685 15.38627860346859 24 17.832399694069494 17.821030655063357 48.407838435620235 15.938731215246914 25 17.2779626682101 19.283337123013002 46.70765032970213 16.731049879074767 26 16.216549186596936 20.3403683568638 46.86202120842549 16.581061248113773 27 16.05527420054985 20.18620418794055 47.18647291068069 16.572048700828905 28 15.271844058126796 20.78446369142361 47.49521466812742 16.448477582322177 29 16.354424623271388 19.443619902019556 47.190193687082704 17.01176178762635 30 16.686731297930834 20.265787460983525 46.55588399446018 16.49159724662546 31 17.595840998821753 20.782355251462473 44.76631457097381 16.855489178741966 32 18.168303119250883 21.50832006945449 43.41571407900449 16.907662732290138 33 18.032660148417637 23.944643115530106 41.101845918515 16.920850817537257 34 17.88349835665709 24.56766645306654 39.98755607003328 17.56127912024309 35 18.060069867912436 25.62866651507948 38.07160427475866 18.239659342249418 36 17.72949955557393 28.502676891911445 36.22853835500341 17.539285197511216 37 18.851892428220022 28.278438100750357 35.735576823697215 17.13409264733241 38 18.184798561299793 27.656241602414372 35.531223515306856 18.627736320978975 39 19.283213097132933 26.92490232961945 35.1837029993592 18.60818157388842 40 19.426173594890134 26.629100605659715 36.21344853959526 17.73127725985489 41 17.683775347789236 27.67769807966596 35.622837298716334 19.015689273828475 42 17.699361266717656 28.004010170122168 34.720300969468965 19.576327593691218 43 18.298034189800937 26.826549806726334 35.082415197304506 19.79300080616822 44 18.1696260619716 26.669863778241726 34.81840544060194 20.342104719184736 45 18.398164416975007 25.88225809785642 34.879963619075184 20.839613866093394 46 17.70047749963826 26.524877524443436 35.924840316679415 19.849804659238895 47 17.46081815738884 25.59840420034314 37.73950430989933 19.201273332368686 48 17.28933170721624 24.48659486946276 38.34995969158898 19.87411373173202 49 17.446141761580915 24.52359592368274 38.33334022366001 19.69692209107634 50 16.79872666763131 23.92087148851727 38.8774004175538 20.40300142629762 51 16.376955991483555 23.977633999627923 38.05366186410898 21.591748144779544 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 615.0 1 1399.5 2 2184.0 3 114513.0 4 226842.0 5 155945.0 6 85048.0 7 78338.5 8 71629.0 9 67876.5 10 64124.0 11 59965.0 12 55806.0 13 51601.5 14 47397.0 15 43343.0 16 39289.0 17 35605.0 18 31921.0 19 29111.0 20 26301.0 21 24364.5 22 22428.0 23 21331.0 24 20234.0 25 20608.0 26 22798.5 27 24615.0 28 26897.0 29 29179.0 30 33991.0 31 38803.0 32 41587.5 33 44372.0 34 48896.5 35 53421.0 36 57632.5 37 61844.0 38 65163.5 39 68483.0 40 76574.0 41 84665.0 42 92756.5 43 100848.0 44 113850.0 45 126852.0 46 135750.5 47 144649.0 48 144483.5 49 144318.0 50 130449.5 51 116581.0 52 107413.0 53 98245.0 54 94313.0 55 90381.0 56 88220.0 57 86059.0 58 85235.5 59 84412.0 60 85347.5 61 86283.0 62 79994.0 63 73705.0 64 63426.0 65 53147.0 66 43396.5 67 33646.0 68 28145.5 69 22645.0 70 18660.0 71 14675.0 72 12368.5 73 10062.0 74 7875.5 75 4301.0 76 2913.0 77 2263.5 78 1614.0 79 1335.5 80 1057.0 81 838.0 82 619.0 83 371.5 84 124.0 85 109.0 86 94.0 87 60.0 88 26.0 89 21.0 90 16.0 91 10.0 92 4.0 93 3.5 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2418850.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.29241371439889 #Duplication Level Percentage of deduplicated Percentage of total 1 78.15022299843858 23.673588869412324 2 8.529557261078898 5.1676175470651415 3 2.9568476959800543 2.6871016109128485 4 1.4529609085352047 1.7605477180878923 5 0.9022202661098161 1.3665214781256805 6 0.6722272022665967 1.2218030712679593 7 0.4931458231195833 1.0457004106826338 8 0.43301350600091226 1.0493619414161584 9 0.360991920343215 0.9841784938732797 >10 5.509091458075575 40.42578783156433 >50 0.4639197542122986 8.624278252670251 >100 0.06531265893067044 4.160444742861421 >500 0.006153280853055943 1.2697498046269668 >1k 0.0041954187634472345 2.1723384456499595 >5k 0.0 0.0 >10k+ 1.398472921149078E-4 4.390979781783263 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 103651 4.2851354982739736 No Hit CCTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGCCGTCTTCTGC 3006 0.12427393182710793 TruSeq Adapter, Index 21 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 2980 0.12319904086652748 No Hit CGCTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGCCGTCTTCTG 2684 0.11096182069991938 TruSeq Adapter, Index 15 (95% over 22bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA 2605 0.10769580585815575 No Hit TATGAAAACTATGCCCTCGTGTACTCCTGCACCACCTTCTTCTGGCTCTTC 2486 0.1027761126154991 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.893937201562726E-4 0.0 0.0 0.0725964817992021 0.0 2 2.893937201562726E-4 0.0 0.0 0.3499596915889782 0.0 3 2.893937201562726E-4 0.0 0.0 0.5904458730388408 0.0 4 2.893937201562726E-4 0.0 0.0 0.8109225458378981 0.0 5 2.893937201562726E-4 0.0 0.0 1.3751162742625629 0.0 6 2.893937201562726E-4 0.0 0.0 1.8522438348802117 0.0 7 3.307356801785973E-4 0.0 0.0 2.2602062963805114 0.0 8 3.307356801785973E-4 0.0 0.0 2.7974450668706203 0.0 9 3.307356801785973E-4 0.0 0.0 3.0895673563883665 0.0 10 3.720776402009219E-4 0.0 0.0 3.5365566281497407 0.0 11 3.720776402009219E-4 0.0 0.0 4.153585381482936 0.0 12 3.720776402009219E-4 0.0 0.0 4.655311408313868 0.0 13 4.134196002232466E-4 0.0 0.0 4.86714761146826 0.0 14 4.134196002232466E-4 0.0 0.0 4.977613328647911 0.0 15 4.134196002232466E-4 0.0 0.0 5.134836802612812 0.0 16 4.134196002232466E-4 0.0 0.0 5.42059243028712 0.0 17 4.134196002232466E-4 0.0 0.0 5.75848026954958 0.0 18 4.134196002232466E-4 0.0 0.0 6.119312896624429 0.0 19 4.134196002232466E-4 0.0 0.0 6.372201666080989 0.0 20 4.134196002232466E-4 0.0 0.0 6.638195836864626 0.0 21 4.5476156024557127E-4 0.0 0.0 6.955908799636191 0.0 22 4.5476156024557127E-4 0.0 0.0 7.299212435661575 0.0 23 4.5476156024557127E-4 0.0 0.0 7.628418463319346 0.0 24 4.5476156024557127E-4 0.0 0.0 7.910329288711578 0.0 25 4.5476156024557127E-4 0.0 0.0 8.1653678400893 0.0 26 4.5476156024557127E-4 0.0 0.0 8.412675444942845 0.0 27 4.5476156024557127E-4 0.0 0.0 8.644645182628109 0.0 28 4.5476156024557127E-4 0.0 0.0 8.887157120119065 0.0 29 4.5476156024557127E-4 0.0 0.0 9.14174090993654 0.0 30 4.5476156024557127E-4 0.0 0.0 9.431837443413192 0.0 31 4.5476156024557127E-4 0.0 0.0 9.697500878516651 0.0 32 4.5476156024557127E-4 0.0 0.0 9.968662794303079 0.0 33 4.5476156024557127E-4 0.0 0.0 10.230316059284371 0.0 34 4.96103520267896E-4 0.0 0.0 10.484114351861422 0.0 35 4.96103520267896E-4 0.0 0.0 10.75118341360564 0.0 36 4.96103520267896E-4 0.0 0.0 11.041445314922381 0.0 37 5.374454802902206E-4 0.0 0.0 11.338445955722761 0.0 38 5.374454802902206E-4 0.0 0.0 11.64842797197015 0.0 39 5.374454802902206E-4 0.0 0.0 11.963205655580131 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 69040 0.0 44.50464 1 TATAGCG 60 3.6379788E-12 41.249996 1 GTTTTTT 76780 0.0 40.214573 2 CCCTCGT 400 0.0 38.8125 14 CGCATAC 30 1.14029484E-4 37.499996 41 TATAACG 60 1.5643309E-10 37.499996 1 ATAGGGA 1550 0.0 36.29032 4 CGAACCG 25 0.002107568 36.0 1 GTATACG 50 4.8827133E-8 36.0 1 CGCGTAG 25 0.002107568 36.0 1 CGGACGT 25 0.002107568 36.0 11 TACGGGA 805 0.0 35.776398 4 AATTGCG 140 0.0 35.357143 1 CGTGTAC 435 0.0 35.172413 18 TACGGGC 270 0.0 35.0 4 TAGGGCG 445 0.0 34.887638 5 TATCGGG 220 0.0 34.772728 3 TCGTGTA 445 0.0 34.382023 17 TGCGGGA 1410 0.0 34.148937 4 TACTCCT 450 0.0 34.000004 22 >>END_MODULE