##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934876.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2208464 Sequences flagged as poor quality 0 Sequence length 51 %GC 37 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.71300007607097 34.0 31.0 34.0 31.0 34.0 2 32.86418705489426 34.0 31.0 34.0 31.0 34.0 3 32.905759387520014 34.0 33.0 34.0 31.0 34.0 4 36.26908521035435 37.0 37.0 37.0 35.0 37.0 5 36.17497138282535 37.0 37.0 37.0 35.0 37.0 6 36.1819594976418 37.0 37.0 37.0 35.0 37.0 7 36.31725217164509 37.0 37.0 37.0 35.0 37.0 8 36.334078798658254 37.0 37.0 37.0 35.0 37.0 9 38.121373950401725 39.0 39.0 39.0 37.0 39.0 10 37.734960135188985 39.0 38.0 39.0 35.0 39.0 11 37.57481444116816 39.0 37.0 39.0 35.0 39.0 12 37.58914023502307 39.0 37.0 39.0 35.0 39.0 13 37.61988151040723 39.0 37.0 39.0 35.0 39.0 14 38.992388827710116 40.0 38.0 41.0 35.0 41.0 15 39.043386263031685 41.0 39.0 41.0 35.0 41.0 16 39.103854986995486 41.0 39.0 41.0 35.0 41.0 17 39.101906121177436 41.0 39.0 41.0 35.0 41.0 18 38.547729100406436 39.0 38.0 41.0 35.0 41.0 19 38.0487741706453 39.0 37.0 41.0 35.0 41.0 20 37.44932224387629 38.0 35.0 41.0 35.0 41.0 21 37.39697545443349 38.0 35.0 41.0 35.0 41.0 22 37.21478321584595 38.0 35.0 41.0 34.0 41.0 23 37.12148126480667 38.0 35.0 41.0 34.0 41.0 24 36.93321783828036 38.0 35.0 40.0 34.0 41.0 25 36.799068945656344 38.0 35.0 40.0 33.0 41.0 26 36.911342000594075 38.0 35.0 40.0 34.0 41.0 27 36.92231478529874 38.0 35.0 40.0 34.0 41.0 28 36.8537657847264 38.0 35.0 40.0 33.0 41.0 29 36.711384926356054 38.0 35.0 41.0 33.0 41.0 30 36.4165913503684 38.0 35.0 41.0 33.0 41.0 31 35.899727140673335 38.0 35.0 41.0 31.0 41.0 32 35.137889048678176 38.0 35.0 41.0 23.0 41.0 33 34.13520030211043 38.0 34.0 41.0 16.0 41.0 34 33.259116290779474 38.0 33.0 41.0 11.0 41.0 35 32.73159490034703 38.0 33.0 41.0 10.0 41.0 36 32.4898341109477 38.0 31.0 41.0 8.0 41.0 37 32.242563609821126 38.0 31.0 41.0 8.0 41.0 38 32.09656485231364 38.0 30.0 41.0 7.0 41.0 39 32.0089125292511 38.0 30.0 41.0 7.0 41.0 40 31.862485419730636 38.0 29.0 41.0 7.0 41.0 41 31.712979699918133 37.0 29.0 41.0 7.0 41.0 42 31.573405316998603 37.0 27.0 41.0 7.0 41.0 43 31.460585275558035 37.0 26.0 40.0 7.0 41.0 44 31.356888316947888 37.0 25.0 40.0 7.0 41.0 45 31.325998069246317 37.0 24.0 40.0 7.0 41.0 46 31.292271913873172 37.0 24.0 40.0 7.0 41.0 47 31.297779814386832 36.0 25.0 40.0 7.0 41.0 48 31.25574969752733 36.0 25.0 40.0 7.0 41.0 49 31.146877648899867 36.0 25.0 40.0 7.0 41.0 50 31.064692926848707 36.0 24.0 40.0 7.0 41.0 51 30.56628045555644 35.0 24.0 40.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 8.0 9 14.0 10 13.0 11 24.0 12 21.0 13 24.0 14 58.0 15 100.0 16 198.0 17 428.0 18 781.0 19 1475.0 20 2446.0 21 3828.0 22 6301.0 23 10646.0 24 20860.0 25 46346.0 26 88472.0 27 117219.0 28 111557.0 29 88066.0 30 66810.0 31 55072.0 32 50745.0 33 57481.0 34 95003.0 35 128271.0 36 141515.0 37 183336.0 38 359842.0 39 571140.0 40 362.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 27.826670482289956 15.716579486919416 18.26495700178948 38.191793029001154 2 51.458162777387365 18.065949909077077 18.266949336733585 12.208937976801977 3 22.68735193328938 17.831714712125713 47.02906635562092 12.451866998963986 4 20.56574161951474 19.081497366495448 46.760961464619754 13.591799549370059 5 18.553302204609174 22.149512059060054 45.35410131204312 13.94308442428765 6 19.811733403849914 24.588084750306095 44.721534967289486 10.878646878554507 7 59.910643777756846 4.136857109737808 32.76018988763231 3.1923092248730343 8 61.35581109766788 3.529511914162966 32.34433524838983 2.7703417397793215 9 56.76705619833513 6.020202276333234 33.45723543603156 3.7555060893000745 10 28.42908012084417 24.21117120315296 38.3855928826551 8.974155793347775 11 20.64484637286367 18.94882597135385 47.093862521644006 13.31246513413848 12 20.32435212890045 17.019204297647597 48.40554340029994 14.250900173152017 13 17.773031391953864 17.432342116511748 49.52482811583073 15.269798375703655 14 14.278928703388418 20.14300436864717 49.0333553093915 16.544711618572908 15 14.174014156445386 19.863352991038116 51.129246390251325 14.833386462265178 16 16.655467329329344 19.148014185424802 50.26584087401923 13.930677611226628 17 16.834098269204297 18.959240449470762 48.078936310485474 16.12772497083946 18 16.450166269407156 19.87978975432699 48.33938882408769 15.330655152178165 19 17.926441182650024 20.158671366162185 47.00307544066826 14.91181201051953 20 18.932434488404613 19.886989328329555 47.72493461518956 13.455641568076274 21 18.212069565091394 19.563053778553783 47.87608038890378 14.348796267451041 22 17.51199023393635 18.514225271500916 47.696317440537854 16.27746705402488 23 16.700113744213173 19.407334690536047 48.13069173869259 15.761859826558187 24 16.819608560519892 18.41651029856045 48.774985691412674 15.988895449506987 25 16.168250874816163 19.68105434365242 47.582346825667074 16.568347955864347 26 15.646530801498235 21.164392989878937 47.40964761028479 15.77942859833803 27 15.948414825869925 21.449432727905005 47.67915619181476 14.922996254410306 28 15.246207318751855 20.855581073542517 48.311133892153094 15.587077715552528 29 15.913322562649878 19.37817415180868 47.99629969064472 16.712203594896724 30 16.732941990451284 19.8787483065153 47.45424874482899 15.934060958204435 31 17.080423316839216 21.123097320128377 45.169266965637654 16.62721239739475 32 17.283867882836216 22.03314158618841 43.72287707655638 16.960113454418998 33 18.339669562193453 23.424017778872557 41.059804461381304 17.17650819755269 34 17.349841337689906 24.2156539567772 40.59418672887581 17.84031797665708 35 18.094023719653116 25.15191553948808 37.65005904556289 19.104001695295917 36 18.583594751827516 27.059983771526277 36.66489469604214 17.691526780604075 37 19.278829086641213 27.295396257308248 36.451986539060634 16.97378811698991 38 18.837255214483914 27.02688384325033 35.26378514659963 18.87207579566613 39 19.400497359250593 26.011562787530156 35.882812669801275 18.70512718341798 40 19.240431358627536 26.172670235964908 36.5094020097226 18.077496395684964 41 17.617991509030713 27.92782676104297 35.47854979750632 18.975631932419997 42 18.65300951249375 27.846956074448126 34.44489020423244 19.05514420882568 43 19.59257655999826 27.162770142506286 34.55655152178166 18.6881017757138 44 18.735555571655233 27.00954147316868 34.60386947670417 19.651033478471916 45 18.54510646313456 26.24502821870766 34.90887784451094 20.300987473646842 46 18.235615341703554 26.887873200559305 35.46781835701193 19.40869310072521 47 17.798026139434466 26.29959102797238 37.05598098950221 18.846401843090945 48 17.949624716545074 25.086394888030778 37.26952307123865 19.694457324185496 49 18.230408102645097 24.53587651870259 37.65359091205471 19.5801244665976 50 16.90853914757044 24.43055444870281 38.50223503756457 20.158671366162185 51 16.99072296401481 24.158510168153068 37.19490107151396 21.655865796318167 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 380.0 1 1018.5 2 1657.0 3 95254.5 4 188852.0 5 131645.5 6 74439.0 7 70637.0 8 66835.0 9 64064.0 10 61293.0 11 57818.5 12 54344.0 13 50316.0 14 46288.0 15 42359.0 16 38430.0 17 34683.0 18 30936.0 19 28516.0 20 26096.0 21 24136.5 22 22177.0 23 21546.0 24 20915.0 25 20366.5 26 21998.0 27 24178.0 28 26947.5 29 29717.0 30 32897.5 31 36078.0 32 40763.5 33 45449.0 34 50346.5 35 55244.0 36 58873.0 37 62502.0 38 66150.5 39 69799.0 40 76483.5 41 83168.0 42 89159.0 43 95150.0 44 98116.0 45 101082.0 46 105401.5 47 109721.0 48 115659.0 49 121597.0 50 125907.5 51 130218.0 52 125621.5 53 121025.0 54 106368.0 55 91711.0 56 85965.0 57 80219.0 58 76508.5 59 72798.0 60 69804.0 61 66810.0 62 60799.5 63 54789.0 64 47227.0 65 39665.0 66 31874.5 67 24084.0 68 19751.0 69 15418.0 70 12596.0 71 9774.0 72 8016.5 73 6259.0 74 5228.5 75 3353.0 76 2508.0 77 1931.5 78 1355.0 79 1060.0 80 765.0 81 625.0 82 485.0 83 319.0 84 153.0 85 98.5 86 44.0 87 32.5 88 21.0 89 15.0 90 9.0 91 7.5 92 6.0 93 4.5 94 3.0 95 2.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2208464.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.849331139357105 #Duplication Level Percentage of deduplicated Percentage of total 1 78.94798826407467 23.565446444804433 2 8.857261452590839 5.287666601724942 3 3.159557353895574 2.8293202113065967 4 1.524449497314921 1.820151914023182 5 0.8664848214080624 1.2931996180717977 6 0.618350492319443 1.107440916325653 7 0.4111570276989978 0.8590933589042846 8 0.3314340656941161 0.7914468142213688 9 0.26836644879455307 0.7209503097085743 >10 3.824454370430163 29.46121865440067 >50 1.099061477741268 21.221004225219534 >100 0.08534954016550053 5.042879732535691 >500 0.0037447309980529835 0.7531023587788576 >1k 0.002184426415530907 1.0842904152585395 >5k 0.0 0.0 >10k+ 1.5603045825220762E-4 4.162788424715788 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 89380 4.047156756913402 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 2495 0.11297444739873505 No Hit CCTGTCTCTTATACACATCTGACGCCAGCGTAGTCGTATGCCGTCTTCTGC 2492 0.11283860637981873 No Hit GCTGTCTCTTATACACATCTGACGCCAGCGTAGTCGTATGCCGTCTTCTGC 2465 0.1116160372095719 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.3584101891631468E-4 0.0 0.0 0.07090901187431627 0.0 2 1.3584101891631468E-4 0.0 0.0 0.3957954487825022 0.0 3 1.3584101891631468E-4 0.0 0.0 0.5889613776815017 0.0 4 1.3584101891631468E-4 0.0 0.0 0.7942171572640532 0.0 5 1.3584101891631468E-4 0.0 0.0 1.3496258032732251 0.0 6 1.3584101891631468E-4 0.0 0.0 1.6726104659165828 0.0 7 1.3584101891631468E-4 0.0 0.0 2.0035644683363643 0.0 8 1.3584101891631468E-4 0.0 0.0 2.50613095798709 0.0 9 1.3584101891631468E-4 0.0 0.0 2.6934557230726877 0.0 10 1.3584101891631468E-4 0.0 0.0 3.0998014909910236 0.0 11 1.3584101891631468E-4 0.0 0.0 3.709274862528889 0.0 12 1.3584101891631468E-4 0.0 0.0 4.22528961305233 0.0 13 1.3584101891631468E-4 0.0 0.0 4.419225307725188 0.0 14 1.3584101891631468E-4 0.0 0.0 4.496745249186765 0.0 15 1.3584101891631468E-4 0.0 0.0 4.649656956146897 0.0 16 1.3584101891631468E-4 0.0 0.0 4.974045309319056 0.0 17 1.3584101891631468E-4 0.0 0.0 5.362460062740438 0.0 18 1.3584101891631468E-4 0.0 0.0 5.778495823341472 0.0 19 1.3584101891631468E-4 0.0 0.0 6.050902346608321 0.0 20 1.3584101891631468E-4 0.0 0.0 6.331187648972318 0.0 21 1.3584101891631468E-4 0.0 0.0 6.677265284831448 0.0 22 1.3584101891631468E-4 0.0 0.0 7.069166624405017 0.0 23 1.3584101891631468E-4 0.0 0.0 7.43725050532859 0.0 24 1.8112135855508625E-4 0.0 0.0 7.7162679581827005 0.0 25 2.264016981938578E-4 0.0 0.0 7.971830195103927 0.0 26 2.264016981938578E-4 0.0 0.0 8.216027066775823 0.0 27 2.7168203783262937E-4 0.0 0.0 8.4667443073557 0.0 28 2.7168203783262937E-4 0.0 0.0 8.73036644473263 0.0 29 2.7168203783262937E-4 0.0 0.0 9.000961754413927 0.0 30 3.1696237747140093E-4 0.0 0.0 9.318331654942078 0.0 31 3.1696237747140093E-4 0.0 0.0 9.617046055539053 0.0 32 3.1696237747140093E-4 0.0 0.0 9.905617660056945 0.0 33 3.1696237747140093E-4 0.0 0.0 10.173586710039194 0.0 34 3.1696237747140093E-4 0.0 0.0 10.4528305645915 0.0 35 3.1696237747140093E-4 0.0 0.0 10.734972360880684 0.0 36 3.622427171101725E-4 0.0 0.0 11.03626774083707 0.0 37 3.622427171101725E-4 0.0 0.0 11.329276818639562 0.0 38 3.622427171101725E-4 0.0 0.0 11.613003426816103 0.0 39 4.528033963877156E-4 0.0 0.0 11.90687283107173 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGATTA 30 2.1664146E-6 45.000004 35 CGACATA 20 7.0347014E-4 45.0 32 TTACGCG 20 7.0347014E-4 45.0 1 CGTTTTT 62780 0.0 44.49108 1 CGCATCG 50 1.0822987E-9 40.500004 21 GTATACG 45 1.9297659E-8 40.0 1 GTTTTTT 70380 0.0 39.83376 2 GTCTCGA 40 3.4601544E-7 39.375 27 TATAGCG 75 0.0 39.0 1 GTTAGCG 100 0.0 38.250004 1 TCGACGT 60 1.5643309E-10 37.500004 26 CGAACTA 25 0.0021075278 36.000004 12 CGTAACG 25 0.0021075278 36.000004 1 TATCGCG 50 4.8825314E-8 36.000004 1 TGCGTCG 25 0.0021075278 36.000004 2 CCGATAC 70 2.1827873E-11 35.357143 11 GCGTTAG 210 0.0 35.357143 1 AATAGCG 70 2.1827873E-11 35.357143 1 TCGATCA 115 0.0 35.21739 17 CAATACG 45 8.7047556E-7 35.0 1 >>END_MODULE