##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934875.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1583659 Sequences flagged as poor quality 0 Sequence length 51 %GC 38 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.58812787348791 34.0 31.0 34.0 31.0 34.0 2 32.74806003060002 34.0 31.0 34.0 31.0 34.0 3 32.803452637215464 34.0 31.0 34.0 31.0 34.0 4 36.19412322981147 37.0 37.0 37.0 35.0 37.0 5 36.081539018185104 37.0 35.0 37.0 35.0 37.0 6 36.07238995263501 37.0 35.0 37.0 35.0 37.0 7 36.221643043104606 37.0 37.0 37.0 35.0 37.0 8 36.2284342778338 37.0 37.0 37.0 35.0 37.0 9 37.99355290501301 39.0 39.0 39.0 35.0 39.0 10 37.468756847275834 39.0 37.0 39.0 34.0 39.0 11 37.367016510498786 39.0 37.0 39.0 34.0 39.0 12 37.40693924639079 39.0 37.0 39.0 35.0 39.0 13 37.45769322815076 39.0 37.0 39.0 35.0 39.0 14 38.77242765014438 40.0 38.0 41.0 35.0 41.0 15 38.82712503133566 40.0 38.0 41.0 35.0 41.0 16 38.91622375776603 40.0 38.0 41.0 35.0 41.0 17 38.91654263954551 40.0 38.0 41.0 35.0 41.0 18 38.39887816758532 39.0 38.0 41.0 35.0 41.0 19 37.897165993436715 38.0 37.0 41.0 35.0 41.0 20 37.31492827685758 38.0 35.0 41.0 34.0 41.0 21 37.272916707447756 38.0 35.0 41.0 34.0 41.0 22 37.09529261034099 38.0 35.0 40.0 34.0 41.0 23 36.98642068778695 38.0 35.0 40.0 33.0 41.0 24 36.75080304535257 38.0 35.0 40.0 33.0 41.0 25 36.602559010494055 37.0 35.0 40.0 33.0 41.0 26 36.731531851238174 38.0 35.0 40.0 33.0 41.0 27 36.75129620707488 38.0 35.0 40.0 33.0 41.0 28 36.689710979446964 38.0 35.0 40.0 33.0 41.0 29 36.549007077912606 38.0 35.0 40.0 33.0 41.0 30 36.22445488580559 38.0 35.0 40.0 32.0 41.0 31 35.73467836194534 38.0 35.0 40.0 30.0 41.0 32 34.99535253485757 38.0 35.0 40.0 23.0 41.0 33 33.98575640336714 38.0 34.0 40.0 16.0 41.0 34 33.17096041508936 38.0 33.0 40.0 12.0 41.0 35 32.6596009620758 38.0 32.0 41.0 10.0 41.0 36 32.41059407359791 38.0 31.0 41.0 8.0 41.0 37 32.181397636738716 38.0 31.0 40.0 8.0 41.0 38 32.02017290338387 38.0 30.0 40.0 7.0 41.0 39 31.93962147154154 37.0 30.0 40.0 7.0 41.0 40 31.8044686387663 37.0 29.0 40.0 7.0 41.0 41 31.686789896057167 37.0 29.0 40.0 7.0 41.0 42 31.570960667668988 37.0 28.0 40.0 7.0 41.0 43 31.463467829880045 37.0 27.0 40.0 7.0 41.0 44 31.363377469518376 37.0 26.0 40.0 7.0 41.0 45 31.3277460614943 37.0 25.0 40.0 7.0 41.0 46 31.27359867244148 36.0 25.0 40.0 7.0 41.0 47 31.26286403828097 36.0 25.0 40.0 7.0 41.0 48 31.22124207294626 36.0 25.0 40.0 7.0 41.0 49 31.11250275469656 36.0 25.0 40.0 7.0 41.0 50 31.032512681075914 36.0 25.0 40.0 7.0 41.0 51 30.50091528542445 35.0 24.0 40.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 5.0 8 2.0 9 18.0 10 16.0 11 23.0 12 19.0 13 28.0 14 40.0 15 91.0 16 179.0 17 313.0 18 595.0 19 1134.0 20 1900.0 21 3105.0 22 5066.0 23 8651.0 24 16401.0 25 35390.0 26 64464.0 27 82315.0 28 77130.0 29 60982.0 30 46555.0 31 40266.0 32 38655.0 33 45172.0 34 74929.0 35 98364.0 36 107330.0 37 142756.0 38 270980.0 39 360596.0 40 189.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.090732285169977 15.394223125054069 18.12757670685419 37.38746788292177 2 50.95408796969549 17.987837028047075 18.41040274453023 12.6476722577272 3 23.165908822543237 17.99989770525094 46.591280067236696 12.242913404969125 4 20.776505548227238 19.027896788386894 46.3928156250809 13.802782038304965 5 19.290200731344314 21.749757997144588 44.888325075031936 14.071716196479167 6 19.673869185222323 24.431585334974258 44.48804951065854 11.406495969144872 7 58.751726223890365 4.590508436475277 32.95507429314012 3.702691046494226 8 59.644784641138024 4.1947161604865695 32.46405949765701 3.6964397007184 9 55.12941864378632 5.528589172290247 34.31426841258124 5.027723771342189 10 30.217363712768975 17.99352006966146 41.64621297893044 10.142903238639127 11 22.12685938071264 18.408445252418606 46.08504734920839 13.379648017660367 12 19.918050539920525 17.350768063074185 48.12557501330779 14.6056063836975 13 17.576637394792694 18.420316494901996 48.802804139022356 15.20024197128296 14 14.734611428344108 21.08004311534238 47.8469165394823 16.338428916831212 15 14.286787749130337 20.08462680412892 50.84086915175552 14.78771629498522 16 16.078145610892243 18.917203766719982 49.37192918424989 15.632721438137882 17 16.110223223560123 18.92396027175042 47.44790387324544 17.517912631444016 18 15.966252835995629 19.458355618223365 48.44862435663233 16.126767189148676 19 17.460766490766005 20.028238402332825 46.934977795093516 15.576017311807655 20 18.567633562528297 19.962820278860537 46.93213627428632 14.537409884324845 21 17.69320289279447 19.84366583967887 47.29913447276213 15.163996794764529 22 17.01407941987511 18.761677861206234 46.79864794125503 17.425594777663626 23 16.546175660290505 19.528635899521298 47.079137617378485 16.84605082280971 24 16.54169237190582 18.745260185431334 47.77139523091777 16.94165221174508 25 15.68014326316461 20.58454503147458 46.26684153596197 17.46847016939884 26 15.06347010309669 21.109152917389412 46.57138942158634 17.25598755792756 27 16.330598948384722 21.358449009540564 46.25793810409943 16.053013937975283 28 15.405841787910148 20.705530672954215 47.29667182139589 16.59195571773974 29 16.37871536738654 19.39476869704905 46.583513243697034 17.64300269186738 30 16.2008361648562 21.48650688058477 45.11722536227812 17.19543159228091 31 17.27543618923013 21.46270125071117 43.579962605586175 17.68189995447252 32 17.992004591897626 22.174849509900806 42.528599906924406 17.304545991277163 33 17.814314824087763 23.75044122503645 40.08710208447652 18.34814186639927 34 17.64117148956941 23.590116306603885 38.97884582476404 19.789866379062666 35 17.715051030556452 24.28534173076401 37.13993984816176 20.85966739051778 36 18.39821577751271 26.793710009541194 35.007725779350224 19.800348433595868 37 19.365658895002017 26.191939047484336 36.079484282916965 18.362917774596678 38 18.97693884857788 26.558242651985054 34.76404958390663 19.700768915530425 39 19.566522843617218 25.941190622476178 34.530539718462116 19.961746815444485 40 18.475126274027424 25.77562467677701 36.14326063881176 19.6059884103838 41 16.989389761305937 26.519029664845778 34.497578077098666 21.994002496749616 42 18.128271300829283 26.323659323124488 34.404502484436364 21.143566891609872 43 19.486897116108963 26.159987724630113 33.9859780419901 20.367137117270826 44 19.171930320858216 25.925467540676372 33.95307954553348 20.949522592931938 45 18.69322878220627 25.15819377782717 33.90344764876782 22.245129791198735 46 18.86915049262499 25.73445419752611 34.99086608922754 20.405529220621357 47 17.354872482017907 25.03127251510584 37.019648800657215 20.594206202219038 48 17.7591893204282 23.933940324274356 36.32252902929229 21.984341326005154 49 18.082743823007352 23.58999001679023 37.26515619839877 21.062109961803646 50 17.316101509226417 23.03652490845567 37.54078371669659 22.106589865621324 51 17.130771207690547 23.34940792178114 36.132273425023946 23.387547445504367 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 403.0 1 829.0 2 1255.0 3 61927.0 4 122599.0 5 86073.5 6 49548.0 7 47220.5 8 44893.0 9 43010.0 10 41127.0 11 39340.0 12 37553.0 13 35622.0 14 33691.0 15 30769.0 16 27847.0 17 25268.5 18 22690.0 19 21089.5 20 19489.0 21 18038.0 22 16587.0 23 15210.5 24 13834.0 25 14276.0 26 14950.0 27 15182.0 28 16978.0 29 18774.0 30 20754.5 31 22735.0 32 24839.5 33 26944.0 34 29545.0 35 32146.0 36 34729.0 37 37312.0 38 40155.0 39 42998.0 40 49164.5 41 55331.0 42 59286.0 43 63241.0 44 69274.5 45 75308.0 46 79231.5 47 83155.0 48 91620.5 49 100086.0 50 108704.0 51 117322.0 52 113164.5 53 109007.0 54 92597.5 55 76188.0 56 66978.0 57 57768.0 58 54493.5 59 51219.0 60 49166.0 61 47113.0 62 41938.5 63 36764.0 64 30768.5 65 24773.0 66 19307.0 67 13841.0 68 12264.0 69 10687.0 70 9002.5 71 7318.0 72 6270.5 73 5223.0 74 4041.0 75 2347.0 76 1835.0 77 1470.5 78 1106.0 79 842.0 80 578.0 81 538.5 82 499.0 83 284.0 84 69.0 85 47.5 86 26.0 87 14.5 88 3.0 89 5.0 90 7.0 91 5.0 92 3.0 93 3.0 94 3.0 95 2.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1583659.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.80913659455844 #Duplication Level Percentage of deduplicated Percentage of total 1 78.57935761847 26.567002352355086 2 9.183197851406508 6.209519810661162 3 3.362312514188348 3.4103064919736115 4 1.6274755627147097 2.200941744165099 5 0.948211697927241 1.6029109407890134 6 0.6369516421730314 1.2920871044613793 7 0.47381335906899424 1.1213454403963132 8 0.36645956336979435 0.9911745147481296 9 0.29579734214851316 0.9000587470505775 >10 3.8490889127137122 32.360663531967425 >50 0.595186293637265 12.48213955862273 >100 0.07566731912226046 4.630683897706365 >500 0.0036213570039733646 0.8101327561694812 >1k 0.002668368318717216 1.5254106430197232 >5k 0.0 0.0 >10k+ 1.905977370512297E-4 3.895622465913921 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 60454 3.8173621972912097 No Hit GCTGTCTCTTATACACATCTGACGCCAGGACTCTCGTATGCCGTCTTCTGC 4138 0.26129362444819243 TruSeq Adapter, Index 13 (95% over 23bp) CCTGTCTCTTATACACATCTGACGCCAGGACTCTCGTATGCCGTCTTCTGC 3375 0.21311406053954796 TruSeq Adapter, Index 13 (95% over 23bp) CTGTCTCTTATACACATCTGACGCCAGGACTCTCGTATGCCGTCTTCTGCT 1993 0.12584779930527973 TruSeq Adapter, Index 8 (95% over 24bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 1593 0.10058983657466664 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.5257962730613093E-4 0.0 0.0 0.13494066588830045 0.0 2 2.5257962730613093E-4 0.0 0.0 0.8100860096775884 0.0 3 2.5257962730613093E-4 0.0 0.0 1.157572431943998 0.0 4 3.1572453413266364E-4 0.0 0.0 1.5325268886799495 0.0 5 3.1572453413266364E-4 0.0 0.0 2.5346365600170238 0.0 6 3.1572453413266364E-4 0.0 0.0 3.0579184028885007 0.0 7 3.1572453413266364E-4 0.0 0.0 3.648702151157541 0.0 8 3.1572453413266364E-4 0.0 0.0 4.53563551244302 0.0 9 3.1572453413266364E-4 0.0 0.0 4.87017722880999 0.0 10 3.1572453413266364E-4 0.0 0.0 5.64654385824221 0.0 11 3.1572453413266364E-4 0.0 0.0 6.684772416284061 0.0 12 3.788694409591964E-4 0.0 0.0 7.561728882290947 0.0 13 3.788694409591964E-4 0.0 0.0 7.870507476672693 0.0 14 3.788694409591964E-4 0.0 0.0 8.004374679144941 0.0 15 3.788694409591964E-4 0.0 0.0 8.253102467134655 0.0 16 3.788694409591964E-4 0.0 0.0 8.786487495098376 0.0 17 3.788694409591964E-4 0.0 0.0 9.45405545006848 0.0 18 4.420143477857291E-4 0.0 0.0 10.179779864225821 0.0 19 4.420143477857291E-4 0.0 0.0 10.657155359834409 0.0 20 4.420143477857291E-4 0.0 0.0 11.066460645883994 0.0 21 4.420143477857291E-4 0.0 0.0 11.574398276396623 0.0 22 4.420143477857291E-4 0.0 0.0 12.128747413426755 0.0 23 5.051592546122619E-4 0.0 0.0 12.665415976545455 0.0 24 5.051592546122619E-4 0.0 0.0 13.111787322902215 0.0 25 5.051592546122619E-4 0.0 0.0 13.506253555847566 0.0 26 5.051592546122619E-4 0.0 0.0 13.87041023351618 0.0 27 5.051592546122619E-4 0.0 0.0 14.219096409012293 0.0 28 5.051592546122619E-4 0.0 0.0 14.578706653389398 0.0 29 5.051592546122619E-4 0.0 0.0 14.961617368385491 0.0 30 5.683041614387946E-4 0.0 0.0 15.360566889715527 0.0 31 5.683041614387946E-4 0.0 0.0 15.753201920362907 0.0 32 6.945939750918601E-4 0.0 0.0 16.129292985421735 0.0 33 6.945939750918601E-4 0.0 0.0 16.49123959135142 0.0 34 7.577388819183928E-4 0.0 0.0 16.851986444051402 0.0 35 7.577388819183928E-4 0.0 0.0 17.21355418054013 0.0 36 7.577388819183928E-4 0.0 0.0 17.58964524559896 0.0 37 7.577388819183928E-4 0.0 0.0 17.98587953593545 0.0 38 7.577388819183928E-4 0.0 0.0 18.36323349913081 0.0 39 7.577388819183928E-4 0.0 0.0 18.71823416530958 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATTGCG 25 3.8914754E-5 45.000004 1 TAGACGC 20 7.034095E-4 45.0 1 AATGCGT 20 7.034095E-4 45.0 13 CGCGTAA 45 3.8562575E-10 45.0 31 GCGTAAC 45 3.8562575E-10 45.0 32 CGTTTTT 44010 0.0 44.493862 1 TGCGACG 50 1.0822987E-9 40.500004 1 GTTTTTT 48945 0.0 40.17775 2 GGTACGA 45 1.9290383E-8 40.0 9 GTCGATG 40 3.4593177E-7 39.375 1 GTATGCG 40 3.4593177E-7 39.375 1 TATAGCG 80 0.0 39.375 1 CAATGCG 40 3.4593177E-7 39.375 1 TACGTAG 40 3.4593177E-7 39.375 1 AATTGCG 110 0.0 38.863636 1 GTCGCAC 30 1.1401168E-4 37.499996 25 ATCGTAG 30 1.1401168E-4 37.499996 1 CGCACAT 30 1.1401168E-4 37.499996 30 TCTAGCG 55 2.750312E-9 36.81818 1 TACGAGG 165 0.0 36.81818 2 >>END_MODULE