SRR2934873.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934873.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	863603
Sequences flagged as poor quality	0
Sequence length	51
%GC	39

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	34083	3.946605095165255	No Hit
CCTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCTTCTGC	4343	0.5028931117654756	No Hit
GCTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCTTCTGC	3983	0.46120729085007806	No Hit
CTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCTTCTGCT	2529	0.2928428919306672	No Hit
TCTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCTTCTGC	1545	0.17890164809524747	No Hit
CGCTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCTTCTG	1392	0.16118517420620354	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCC	1248	0.14451084584004456	No Hit
ACTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCTTCTGC	1177	0.13628947560395227	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCACGAC	20	7.03231E-4	45.000004	25
ATCCTTA	20	7.03231E-4	45.000004	35
CGAACCC	20	7.03231E-4	45.000004	40
CGTATAG	20	7.03231E-4	45.000004	31
CTCCGCG	20	7.03231E-4	45.000004	30
CGCATTG	20	7.03231E-4	45.000004	1
ATTACGG	35	1.2114651E-7	45.000004	2
ATTCGGT	20	7.03231E-4	45.000004	18
TAACGAT	20	7.03231E-4	45.000004	1
ACCTATC	20	7.03231E-4	45.000004	38
ACGATAT	20	7.03231E-4	45.000004	32
TACGATA	20	7.03231E-4	45.000004	31
TATTCGG	20	7.03231E-4	45.000004	17
CTTTGCG	35	1.2114651E-7	45.000004	1
TTACGTT	20	7.03231E-4	45.000004	20
CTCGAGG	20	7.03231E-4	45.000004	2
CTCGACG	20	7.03231E-4	45.000004	1
AGTTACG	20	7.03231E-4	45.000004	1
TTACGAT	20	7.03231E-4	45.000004	30
CCGCGAT	20	7.03231E-4	45.000004	10