##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934871.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1535929 Sequences flagged as poor quality 0 Sequence length 51 %GC 38 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.61131080928871 34.0 31.0 34.0 31.0 34.0 2 32.76640652009305 34.0 31.0 34.0 31.0 34.0 3 32.81593940865756 34.0 31.0 34.0 31.0 34.0 4 36.21300203329711 37.0 37.0 37.0 35.0 37.0 5 36.09882683379245 37.0 35.0 37.0 35.0 37.0 6 36.0874669336929 37.0 36.0 37.0 35.0 37.0 7 36.23281675129515 37.0 37.0 37.0 35.0 37.0 8 36.22388665101056 37.0 37.0 37.0 35.0 37.0 9 37.98941747958402 39.0 39.0 39.0 35.0 39.0 10 37.62044534610649 39.0 38.0 39.0 35.0 39.0 11 37.548852844109334 39.0 37.0 39.0 35.0 39.0 12 37.52076691044964 39.0 37.0 39.0 35.0 39.0 13 37.484034743793494 39.0 37.0 39.0 35.0 39.0 14 38.80110473856539 40.0 38.0 41.0 35.0 41.0 15 38.83709142805429 40.0 38.0 41.0 35.0 41.0 16 38.928531201637576 40.0 38.0 41.0 35.0 41.0 17 38.958268904356906 40.0 38.0 41.0 35.0 41.0 18 38.42317255550224 39.0 38.0 41.0 35.0 41.0 19 37.91907568644123 38.0 37.0 41.0 35.0 41.0 20 37.34307835843975 38.0 35.0 41.0 34.0 41.0 21 37.287453391400255 38.0 35.0 41.0 34.0 41.0 22 37.082210831360044 38.0 35.0 41.0 34.0 41.0 23 36.98062866187174 38.0 35.0 40.0 34.0 41.0 24 36.769144276851335 37.0 35.0 40.0 33.0 41.0 25 36.60523045010544 37.0 35.0 40.0 33.0 41.0 26 36.72691055380815 38.0 35.0 40.0 33.0 41.0 27 36.76093686622233 38.0 35.0 40.0 33.0 41.0 28 36.69673467979314 38.0 35.0 40.0 33.0 41.0 29 36.54191437234403 38.0 35.0 40.0 33.0 41.0 30 36.22025367057982 38.0 35.0 40.0 32.0 41.0 31 35.68830785798041 38.0 35.0 40.0 30.0 41.0 32 34.90049214514473 38.0 35.0 40.0 22.0 41.0 33 33.86945099675831 38.0 34.0 40.0 15.0 41.0 34 32.99871087791168 38.0 33.0 40.0 10.0 41.0 35 32.50499860345107 38.0 32.0 40.0 9.0 41.0 36 32.275654668933264 38.0 31.0 40.0 8.0 41.0 37 32.002590614540125 37.0 30.0 40.0 7.0 41.0 38 31.850959256580218 37.0 30.0 40.0 7.0 41.0 39 31.77270303510123 37.0 29.0 40.0 7.0 41.0 40 31.64834963074465 37.0 29.0 40.0 7.0 41.0 41 31.521589214084766 37.0 28.0 40.0 7.0 41.0 42 31.389982870301946 37.0 27.0 40.0 7.0 41.0 43 31.235144983915273 37.0 25.0 40.0 7.0 41.0 44 31.114285230632404 36.0 24.0 40.0 7.0 41.0 45 31.09174903267013 36.0 24.0 40.0 7.0 41.0 46 31.058171959771578 36.0 24.0 40.0 7.0 41.0 47 31.03483819890112 36.0 24.0 40.0 7.0 41.0 48 30.973567137543466 35.0 24.0 40.0 7.0 41.0 49 30.821589409406293 35.0 24.0 40.0 7.0 41.0 50 30.729128104228778 35.0 24.0 40.0 7.0 41.0 51 30.207902188187084 35.0 24.0 39.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 4.0 9 10.0 10 16.0 11 10.0 12 9.0 13 27.0 14 47.0 15 54.0 16 121.0 17 257.0 18 526.0 19 1063.0 20 1846.0 21 2942.0 22 4653.0 23 8085.0 24 16248.0 25 35116.0 26 65243.0 27 83480.0 28 77827.0 29 59193.0 30 44094.0 31 37168.0 32 36064.0 33 43366.0 34 72662.0 35 98524.0 36 107706.0 37 141715.0 38 256864.0 39 340769.0 40 219.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.914878226793032 15.145036001013068 17.74255190181317 38.19753387038073 2 51.25302015913496 17.408226552138803 18.27167792261231 13.067075366113928 3 22.55501393619106 17.991847279398982 46.29608530081794 13.157053483592016 4 21.098501297911557 18.84077974958478 46.13826550576231 13.922453446741354 5 18.505673113796277 21.53328702042868 45.24245586872831 14.71858399704674 6 19.84134683308929 24.5002861460393 44.18967282992899 11.46869419094242 7 57.83854592237011 4.86500352555359 33.40167416592824 3.8947763861480578 8 57.68144230625244 4.6485872719377 33.35427614167061 4.315694280139251 9 52.84756001091196 6.699853964603833 35.085345741893015 5.367240282591188 10 28.646376232234694 20.367868566841306 40.30798298619272 10.677772214731279 11 22.702677011762916 19.125298109482923 44.059263156044324 14.112761722709838 12 21.903681745705693 16.30778506037714 47.32126289691776 14.467270296999404 13 18.46179087705226 18.326302843425704 47.92220213304131 15.289704146480728 14 14.295908209298739 21.465119806970247 47.17548792945507 17.063484054275946 15 13.434214732582038 19.731771455581608 51.70499417616309 15.129019635673263 16 14.35710895490612 18.8784116974157 51.119941091027 15.644538256651186 17 15.399474845516947 18.335417848090636 47.54959376377424 18.715513542618183 18 15.449021406588455 19.656637774272117 47.9709023008225 16.923438518316928 19 17.709477456314712 19.842388547908136 46.41855189920888 16.029582096568266 20 20.017852387708025 19.096650951964577 46.422653651308096 14.462843009019297 21 18.35429892918227 19.179141744182186 46.76713572046624 15.699423606169297 22 16.414691043661524 19.37016619908863 45.420523995575316 18.79461876167453 23 16.54503561037001 19.762697364266188 46.47753900082621 17.214728024537592 24 17.599055685516714 17.97407302030237 47.32829447194499 17.098576822235923 25 16.093647557927483 19.5171782028987 46.41269225335286 17.976481985820957 26 15.409761779353081 20.98508459700937 46.73887920600496 16.866274417632585 27 16.45616431488695 20.773095631373586 46.25871378169173 16.51202627204773 28 14.637851098585939 20.671463329359625 47.29189956046145 17.398786011592986 29 15.286839430728893 18.938766049732767 47.15823452776788 18.616159991770452 30 15.872869123507662 20.107570076481398 45.29682036083699 18.722740439173947 31 15.838752963190355 21.469026237540927 43.54009853320043 19.15212226606829 32 17.524963719026072 22.395110711497733 41.957733723368726 18.12219184610747 33 18.365757792189612 23.88958083348905 39.01085271519712 18.733808659124218 34 16.98385797781017 24.194152203650038 38.94021142904392 19.881778389495867 35 18.170696692360128 24.04062948222216 36.25343358970369 21.53524023571402 36 18.589791585418336 26.46417900827447 34.46396285244956 20.482066553857635 37 18.50749611472926 26.66952704194009 35.51707142712977 19.30590541620088 38 18.691358780256117 26.69322605406891 33.32706134202818 21.288353823646798 39 19.59634852913123 25.43900141217465 35.09478628243884 19.869863776255283 40 20.218577811865003 24.731221299942902 36.93764490415899 18.112555984033115 41 18.134497102405124 26.066699697707378 35.57833727991333 20.220465919974163 42 20.24045382306083 25.95933796418975 33.5727758249242 20.227432387825218 43 20.353740309610664 26.120022474997217 32.94833289820037 20.577904317191745 44 18.54350038315573 26.586059642079814 33.17360372777648 21.69683624698798 45 18.138143104271094 25.503978374000365 33.32471748368577 23.033161038042774 46 18.209565676538432 26.45877511265169 33.90215302920903 21.42950618160084 47 17.544495871879494 25.296872446577932 36.7642644939968 20.39436718754578 48 18.387438481856908 23.327575688719985 35.64044952598721 22.6445363034359 49 17.937547894466476 23.415014626327128 36.76927774656251 21.878159732643894 50 16.89746075502188 23.45127932345831 36.76465513705386 22.88660478446595 51 16.86952977644149 22.871304598064103 35.53823125938764 24.720934366106768 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 494.0 1 883.5 2 1273.0 3 58663.5 4 116054.0 5 82639.5 6 49225.0 7 47289.5 8 45354.0 9 43912.0 10 42470.0 11 40229.5 12 37989.0 13 35338.0 14 32687.0 15 29838.0 16 26989.0 17 25029.5 18 23070.0 19 21343.0 20 19616.0 21 18413.5 22 17211.0 23 15490.5 24 13770.0 25 13873.5 26 14676.5 27 15376.0 28 16957.5 29 18539.0 30 20147.0 31 21755.0 32 23552.5 33 25350.0 34 27222.5 35 29095.0 36 31032.0 37 32969.0 38 35441.5 39 37914.0 40 43132.5 41 48351.0 42 52237.5 43 56124.0 44 61811.0 45 67498.0 46 72027.5 47 76557.0 48 83705.0 49 90853.0 50 98727.5 51 106602.0 52 105379.5 53 104157.0 54 87771.5 55 71386.0 56 63903.0 57 56420.0 58 55192.0 59 53964.0 60 52992.5 61 52021.0 62 47557.0 63 43093.0 64 36013.0 65 28933.0 66 23758.0 67 18583.0 68 16093.0 69 13603.0 70 11691.5 71 9780.0 72 8720.5 73 7661.0 74 5759.5 75 3214.5 76 2571.0 77 1931.5 78 1292.0 79 1101.0 80 910.0 81 590.5 82 271.0 83 203.5 84 136.0 85 107.5 86 79.0 87 58.0 88 37.0 89 22.0 90 7.0 91 5.0 92 3.0 93 1.5 94 0.0 95 1.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1535929.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.78021743259678 #Duplication Level Percentage of deduplicated Percentage of total 1 77.26226358934305 25.326737997932703 2 9.854959536715139 6.46095432805931 3 3.8316231238024736 3.768043173540323 4 1.8974883347398128 2.4880032075434815 5 1.0911506279656376 1.7884077418214055 6 0.7190243144965376 1.414186402111221 7 0.46302867658723734 1.062472648724002 8 0.3603268185064232 0.9449273165949111 9 0.27965862496717975 0.8250543479992669 >10 3.345228081369335 27.429988530939887 >50 0.7927777481771887 16.78153035558227 >100 0.09496278260161614 5.4219677159648585 >500 0.004666973966309539 1.0166147374725703 >1k 0.002637854850522783 1.5892420781491834 >5k 0.0 0.0 >10k+ 2.0291191157867562E-4 3.6818694175645548 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 55354 3.603942630160639 No Hit CCTGTCTCTTATACACATCTGACGCTCCCATGGTCGTATGCCGTCTTCTGC 4535 0.29526104396752717 No Hit GCTGTCTCTTATACACATCTGACGCTCCCATGGTCGTATGCCGTCTTCTGC 4281 0.27872382121829853 No Hit CTGTCTCTTATACACATCTGACGCTCCCATGGTCGTATGCCGTCTTCTGCT 2311 0.15046268414750943 Illumina Single End Adapter 2 (95% over 21bp) CGCTGTCTCTTATACACATCTGACGCTCCCATGGTCGTATGCCGTCTTCTG 1825 0.11882059652496958 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.9532152853419656E-4 0.0 0.0 0.1593823672839044 0.0 2 1.9532152853419656E-4 0.0 0.0 0.9475047349193876 0.0 3 1.9532152853419656E-4 0.0 0.0 1.3735009886524703 0.0 4 1.9532152853419656E-4 0.0 0.0 1.7660321538300272 0.0 5 1.9532152853419656E-4 0.0 0.0 2.8416678114678477 0.0 6 1.9532152853419656E-4 0.0 0.0 3.4166292842963446 0.0 7 1.9532152853419656E-4 0.0 0.0 4.0083884085787815 0.0 8 1.9532152853419656E-4 0.0 0.0 4.922948912352068 0.0 9 1.9532152853419656E-4 0.0 0.0 5.2904789218772486 0.0 10 1.9532152853419656E-4 0.0 0.0 6.065058996867694 0.0 11 1.9532152853419656E-4 0.0 0.0 7.183209640549791 0.0 12 1.9532152853419656E-4 0.0 0.0 8.062286733306031 0.0 13 1.9532152853419656E-4 0.0 0.0 8.413409734434339 0.0 14 1.9532152853419656E-4 0.0 0.0 8.558208094254358 0.0 15 1.9532152853419656E-4 0.0 0.0 8.848911635889419 0.0 16 1.9532152853419656E-4 0.0 0.0 9.440475438643322 0.0 17 1.9532152853419656E-4 0.0 0.0 10.159323770825344 0.0 18 1.9532152853419656E-4 0.0 0.0 10.953891748902455 0.0 19 1.9532152853419656E-4 0.0 0.0 11.397727368908328 0.0 20 2.6042870471226206E-4 0.0 0.0 11.829062411088012 0.0 21 2.6042870471226206E-4 0.0 0.0 12.373618832641352 0.0 22 2.6042870471226206E-4 0.0 0.0 13.000926475117014 0.0 23 2.6042870471226206E-4 0.0 0.0 13.595550315151286 0.0 24 2.6042870471226206E-4 0.0 0.0 14.038279113162131 0.0 25 2.6042870471226206E-4 0.0 0.0 14.427554919530786 0.0 26 2.6042870471226206E-4 0.0 0.0 14.797689216103088 0.0 27 2.6042870471226206E-4 0.0 0.0 15.150439896635847 0.0 28 2.6042870471226206E-4 0.0 0.0 15.526303624711819 0.0 29 2.6042870471226206E-4 0.0 0.0 15.899693280093025 0.0 30 2.6042870471226206E-4 0.0 0.0 16.33708328965727 0.0 31 2.6042870471226206E-4 0.0 0.0 16.764251472561558 0.0 32 2.6042870471226206E-4 0.0 0.0 17.181979114920026 0.0 33 2.6042870471226206E-4 0.0 0.0 17.557061556881862 0.0 34 3.255358808903276E-4 0.0 0.0 17.91547656174211 0.0 35 3.255358808903276E-4 0.0 0.0 18.296548863912328 0.0 36 3.255358808903276E-4 0.0 0.0 18.70613810924854 0.0 37 3.255358808903276E-4 0.0 0.0 19.1348688643811 0.0 38 3.906430570683931E-4 0.0 0.0 19.502008230849214 0.0 39 3.906430570683931E-4 0.0 0.0 19.861464950528312 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTTTACG 30 2.1659798E-6 45.000004 1 TCCGATC 25 3.8914208E-5 45.0 14 TATTGCG 20 7.0340297E-4 45.0 1 ACGATAA 20 7.0340297E-4 45.0 34 CCGTACT 25 3.8914208E-5 45.0 41 ATCGGCG 20 7.0340297E-4 45.0 3 AGTACGT 25 3.8914208E-5 45.0 10 CGTTTTT 42660 0.0 44.50422 1 CGAATAT 205 0.0 43.90244 14 GCTACGA 210 0.0 42.857143 10 ATCCGCC 50 1.0822987E-9 40.5 18 GTTTTTT 47590 0.0 40.05936 2 CGGTCTA 45 1.9290383E-8 40.0 31 AGCTACG 225 0.0 39.0 9 ATTAACG 35 6.24966E-6 38.57143 1 ACGGGTA 245 0.0 38.57143 5 TCTACGG 35 6.24966E-6 38.57143 2 GTATGCG 35 6.24966E-6 38.57143 1 CGAATTA 35 6.24966E-6 38.57143 37 GTCCAAT 35 6.24966E-6 38.57143 44 >>END_MODULE