SRR2934866.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934866.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1471562
Sequences flagged as poor quality	0
Sequence length	51
%GC	37

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	58112	3.949001129412148	No Hit
GCTGTCTCTTATACACATCTGACGCATTAGACGTCGTATGCCGTCTTCTGC	3377	0.2294840448448655	No Hit
CCTGTCTCTTATACACATCTGACGCATTAGACGTCGTATGCCGTCTTCTGC	2862	0.19448721834350166	No Hit
CTGTCTCTTATACACATCTGACGCATTAGACGTCGTATGCCGTCTTCTGCT	2136	0.1451518862270159	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATCCTCG	20	7.033933E-4	45.0	31
GGTACGT	20	7.033933E-4	45.0	9
CGCATCG	25	3.8913404E-5	45.0	21
CGCGAAC	20	7.033933E-4	45.0	40
TAACGAC	20	7.033933E-4	45.0	31
GTAATCG	25	3.8913404E-5	45.0	1
CGCCTAT	25	3.8913404E-5	45.0	42
CCGTATC	20	7.033933E-4	45.0	6
GTTAACG	20	7.033933E-4	45.0	29
CTACGCC	25	3.8913404E-5	45.0	26
AACGATA	25	3.8913404E-5	45.0	40
TATAGCG	20	7.033933E-4	45.0	1
ATACGTT	25	3.8913404E-5	45.0	2
AAATGCG	50	2.1827873E-11	45.0	1
ACGCGAG	30	2.165918E-6	44.999996	1
CGTTTTT	40455	0.0	44.55506	1
TCAACGG	100	0.0	42.75	2
GTGTACG	65	0.0	41.538464	1
GACTCGT	65	0.0	41.538464	29
TAGGGCG	470	0.0	41.17021	5