SRR2934865.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934865.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	972967
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCTGTCTCTTATACACATCTGACGCGTGTTCGTTCGTATGCCGTCTTCTGC	6190	0.6361983499954263	No Hit
GCTGTCTCTTATACACATCTGACGCGTGTTCGTTCGTATGCCGTCTTCTGC	5885	0.6048509353349085	No Hit
CTGTCTCTTATACACATCTGACGCGTGTTCGTTCGTATGCCGTCTTCTGCT	3981	0.40916084512629924	Illumina Single End Adapter 1 (95% over 21bp)
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3151	0.3238547658862017	No Hit
TCTGTCTCTTATACACATCTGACGCGTGTTCGTTCGTATGCCGTCTTCTGC	2253	0.2315597548529395	No Hit
ACTGTCTCTTATACACATCTGACGCGTGTTCGTTCGTATGCCGTCTTCTGC	2129	0.2188152321712864	No Hit
GGATCAGGGGCTTGAGTTTTCCATACAAAAGATTTTTAAATTGTAATAACT	2013	0.2068929367594173	No Hit
CGCTGTCTCTTATACACATCTGACGCGTGTTCGTTCGTATGCCGTCTTCTG	1616	0.16608990849638272	No Hit
GCCTGTCTCTTATACACATCTGACGCGTGTTCGTTCGTATGCCGTCTTCTG	1047	0.10760899393299055	No Hit
GGCTGTCTCTTATACACATCTGACGCGTGTTCGTTCGTATGCCGTCTTCTG	1013	0.10411452803640822	No Hit
ACCTGTCTCTTATACACATCTGACGCGTGTTCGTTCGTATGCCGTCTTCTG	998	0.10257285190556308	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCGCCGA	20	7.0327515E-4	45.000004	2
AGCGTCA	20	7.0327515E-4	45.000004	35
CGTGGCG	30	2.1651558E-6	45.000004	27
CAGCGAC	20	7.0327515E-4	45.000004	36
GATACGA	30	2.1651558E-6	45.000004	13
ACCGGTG	20	7.0327515E-4	45.000004	41
ACGCCCG	20	7.0327515E-4	45.000004	13
GATCGAC	20	7.0327515E-4	45.000004	20
CGACGTC	20	7.0327515E-4	45.000004	39
ACGTTCA	20	7.0327515E-4	45.000004	42
GCGCGAA	30	2.1651558E-6	45.000004	35
CGGTTAG	20	7.0327515E-4	45.000004	14
CACGCTT	20	7.0327515E-4	45.000004	24
ATTCGCG	30	2.1651558E-6	45.000004	1
GTCTACG	35	1.2116652E-7	45.000004	1
ATATGCG	30	2.1651558E-6	45.000004	1
CGCGAGA	20	7.0327515E-4	45.000004	26
AAGCGAC	20	7.0327515E-4	45.000004	29
TAACGCG	20	7.0327515E-4	45.000004	1
TCGGCTA	20	7.0327515E-4	45.000004	30