##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934865.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 972967 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.16394389532225 33.0 31.0 34.0 30.0 34.0 2 32.34730468762044 34.0 31.0 34.0 30.0 34.0 3 32.340773119746096 34.0 31.0 34.0 30.0 34.0 4 35.888296314263485 37.0 35.0 37.0 35.0 37.0 5 35.79786364799628 37.0 35.0 37.0 35.0 37.0 6 35.719558833958395 37.0 35.0 37.0 33.0 37.0 7 36.07494087672038 37.0 35.0 37.0 35.0 37.0 8 35.939546767773216 37.0 35.0 37.0 35.0 37.0 9 37.682387994659635 39.0 38.0 39.0 35.0 39.0 10 37.25592337664073 39.0 37.0 39.0 34.0 39.0 11 37.173440620288254 39.0 37.0 39.0 34.0 39.0 12 37.06808144572221 39.0 37.0 39.0 34.0 39.0 13 36.980600575353535 39.0 37.0 39.0 33.0 39.0 14 38.11050734505898 40.0 37.0 41.0 33.0 41.0 15 38.16194485527259 40.0 37.0 41.0 33.0 41.0 16 38.296251568655464 40.0 37.0 41.0 34.0 41.0 17 38.27309970430652 40.0 37.0 41.0 34.0 41.0 18 38.24647906866317 40.0 37.0 41.0 34.0 41.0 19 38.18599191956151 40.0 37.0 41.0 34.0 41.0 20 38.13959055137533 40.0 36.0 41.0 34.0 41.0 21 38.05500186542812 40.0 36.0 41.0 34.0 41.0 22 38.00702490423622 40.0 36.0 41.0 34.0 41.0 23 37.84282817402851 40.0 36.0 41.0 33.0 41.0 24 37.5905894033405 39.0 35.0 41.0 33.0 41.0 25 37.55285328279376 39.0 35.0 41.0 33.0 41.0 26 37.715906089312384 39.0 36.0 41.0 33.0 41.0 27 37.74839845544607 39.0 36.0 41.0 33.0 41.0 28 37.728423471710755 40.0 36.0 41.0 33.0 41.0 29 37.71882910725646 40.0 36.0 41.0 33.0 41.0 30 37.55172580365007 39.0 36.0 41.0 33.0 41.0 31 37.46767053764413 39.0 36.0 41.0 33.0 41.0 32 37.34193554354875 39.0 35.0 41.0 33.0 41.0 33 37.194642778223724 39.0 35.0 41.0 32.0 41.0 34 37.169795070130846 39.0 35.0 41.0 32.0 41.0 35 37.05621465065105 39.0 35.0 41.0 32.0 41.0 36 36.927394248725804 39.0 35.0 41.0 31.0 41.0 37 36.85757070897574 39.0 35.0 41.0 31.0 41.0 38 36.80086786088326 39.0 35.0 41.0 31.0 41.0 39 36.86545792406115 39.0 35.0 41.0 31.0 41.0 40 36.83720516728728 39.0 35.0 41.0 31.0 41.0 41 36.76859235719197 39.0 35.0 41.0 31.0 41.0 42 36.642231442587466 39.0 35.0 41.0 31.0 41.0 43 36.574083190899586 39.0 35.0 41.0 31.0 41.0 44 36.51453029753321 39.0 35.0 41.0 31.0 41.0 45 36.48642040274747 39.0 35.0 41.0 31.0 41.0 46 36.43882886058828 39.0 35.0 41.0 31.0 41.0 47 36.31197563740599 39.0 35.0 41.0 30.0 41.0 48 36.260953351963636 39.0 35.0 41.0 30.0 41.0 49 36.2516601282469 39.0 35.0 41.0 30.0 41.0 50 36.156496571826175 39.0 35.0 40.0 30.0 41.0 51 35.18643797785536 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 8.0 9 6.0 10 11.0 11 10.0 12 10.0 13 14.0 14 15.0 15 31.0 16 46.0 17 70.0 18 204.0 19 368.0 20 669.0 21 1139.0 22 1677.0 23 2628.0 24 4137.0 25 6442.0 26 8638.0 27 9714.0 28 10446.0 29 11433.0 30 13651.0 31 17625.0 32 23233.0 33 32061.0 34 57929.0 35 82021.0 36 70155.0 37 111163.0 38 209063.0 39 298128.0 40 222.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.562937900257666 22.276295085033716 24.315315935689494 12.845451079019124 2 34.50867295602009 24.43895836138327 24.31243814024525 16.739930542351384 3 30.830850378275933 23.110855763864553 28.062719496139128 17.995574361720386 4 27.206575351476463 25.807658430347587 28.80467682871053 18.18108938946542 5 23.739345733205752 29.249399003254993 27.39630429397914 19.61495096956012 6 24.156934407847334 33.47605828358002 27.343270635078063 15.023736673494579 7 79.26856717648182 5.39627757159287 10.126345497843195 5.208809754082101 8 80.3355098374354 3.748431344536865 9.972383441576127 5.943675376451616 9 75.67378955298587 5.316315969606369 12.678436164844234 6.33145831256353 10 38.34189648775344 20.24816874570258 23.99290006752541 17.41703469901857 11 29.4142555708467 25.968095526364205 23.918385721201233 20.699263181587867 12 25.321619335496475 23.06748327538344 31.62512192088735 19.985775468232735 13 22.181019500147485 26.924859733166695 32.500793963207386 18.393326803478434 14 20.272116114935038 29.975734017700496 29.971828438169023 19.780321429195443 15 18.461982780505405 27.18427243678357 35.78394745145519 18.569797331255838 16 20.677063045303694 24.651401332213734 33.18478427325901 21.48675134922356 17 20.60583760805865 25.30733313668398 28.833660339970418 25.25316891528695 18 21.0111956520622 26.257108411693302 32.68065617847265 20.051039757771846 19 21.59364089429549 28.258717921573904 29.49740330350361 20.65023788062699 20 22.742395168592562 27.173480703867654 30.163612948846158 19.920511178693626 21 21.438959389167362 27.231961618431043 31.529024108731335 19.80005488367026 22 19.64342058877639 26.05925997490151 28.751848726626903 25.545470709695188 23 18.654075626408705 28.169095149167443 29.434708474182575 23.742120750241273 24 21.202980162739333 25.422650511271193 31.27310587101104 22.101263454978433 25 18.717901018225692 27.770520480139616 29.594117786111962 23.917460715522726 26 19.885977633362696 28.84866598764398 29.908516938395653 21.35683944059768 27 21.672574712194763 27.91441025235183 30.862197792936453 19.55081724251696 28 19.806118809784916 26.21003590049817 32.136752839510486 21.847092450206432 29 21.40134249157474 24.635162343635496 32.12483054409862 21.838664620691144 30 21.196505122989784 25.503023226892584 32.57705554247986 20.72341610763777 31 23.274376212142858 26.369650769245002 28.296437597575252 22.05953542103689 32 23.010235701724724 25.48616756786201 30.341830709571855 21.161766020841405 33 21.33576986680946 24.603301036931366 32.313840037740235 21.74708905851894 34 20.672026903276265 23.691348216332106 31.54331030754383 24.09331457284779 35 21.88912881937414 23.588569807609097 31.321308944702132 23.200992428314628 36 23.29431522343512 23.32463485400841 33.16135079607017 20.219699126486304 37 21.481817985604856 24.738043530767232 32.97223852401983 20.807899959608086 38 20.680660289609 26.231208252695108 31.2881115186846 21.800019939011293 39 20.716221619027163 24.294451918718725 32.51384682111521 22.475479641138907 40 22.432312709475244 22.854423634100645 31.37362315474214 23.33964050168197 41 21.366808946243808 23.60676158595307 29.10047308901535 25.925956378787767 42 23.1910229226685 22.998724519947746 30.997145843589763 22.813106713793992 43 23.280851251892408 23.185164553371283 32.152375157636385 21.38160903709992 44 21.12527968574474 23.93801639726733 30.94555108241081 23.99115283457712 45 21.424364855128694 23.356907274347435 29.60336784289704 25.61536002762684 46 23.3728379276995 23.491546989774577 30.592815583673445 22.542799498852478 47 20.174784961874348 23.57253637584831 33.55046985149548 22.702208810781865 48 21.664557996314365 21.588090860224447 32.41055452034858 24.3367966231126 49 21.33268651454777 20.45526723927944 34.84126388664775 23.37078235952504 50 20.658768488551 21.00996231115752 32.723823110136316 25.607446090155168 51 20.054637002077154 21.624474416912392 29.35587743469203 28.965011146318425 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 412.0 1 566.5 2 721.0 3 3303.0 4 5885.0 5 4248.0 6 2611.0 7 2561.0 8 2511.0 9 2625.0 10 2739.0 11 2849.5 12 2960.0 13 2911.5 14 2863.0 15 2836.5 16 2810.0 17 2739.5 18 2669.0 19 2965.5 20 3262.0 21 3033.0 22 2804.0 23 3335.5 24 3867.0 25 4373.0 26 5143.0 27 5407.0 28 7476.5 29 9546.0 30 12854.0 31 16162.0 32 15629.0 33 15096.0 34 18970.0 35 22844.0 36 25070.0 37 27296.0 38 31066.5 39 34837.0 40 40305.0 41 45773.0 42 52877.0 43 59981.0 44 69071.5 45 78162.0 46 90608.5 47 103055.0 48 116670.5 49 130286.0 50 126065.5 51 121845.0 52 102241.0 53 82637.0 54 70201.5 55 57766.0 56 48692.5 57 39619.0 58 34281.5 59 28944.0 60 25137.5 61 21331.0 62 17591.0 63 13851.0 64 10942.0 65 8033.0 66 5913.5 67 3794.0 68 2902.0 69 2010.0 70 1854.0 71 1698.0 72 1296.0 73 894.0 74 693.5 75 470.0 76 447.0 77 250.0 78 53.0 79 57.5 80 62.0 81 46.0 82 30.0 83 21.0 84 12.0 85 8.5 86 5.0 87 4.5 88 4.0 89 2.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 972967.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.818225853289757 #Duplication Level Percentage of deduplicated Percentage of total 1 67.45876546340239 17.416656425182257 2 12.818973089395458 6.61926284858511 3 5.903683179557676 4.572678770882636 4 3.245229914647669 3.3514431552890307 5 1.9397099403109401 2.5039934664409524 6 1.299412547678774 2.012911597954154 7 0.8809479847979614 1.5921159825559965 8 0.6802991133331839 1.4051292924663128 9 0.5013300140599929 1.164910637703044 >10 3.728038535384236 21.545706741232046 >50 1.2046024074136488 22.23974645894974 >100 0.32976944552708437 11.621227996934525 >500 0.005221684277529953 0.9179838859637015 >1k 0.0032133441707876634 1.7840122899043784 >5k 8.033360426969159E-4 1.2522204499561338 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCGTGTTCGTTCGTATGCCGTCTTCTGC 6190 0.6361983499954263 No Hit GCTGTCTCTTATACACATCTGACGCGTGTTCGTTCGTATGCCGTCTTCTGC 5885 0.6048509353349085 No Hit CTGTCTCTTATACACATCTGACGCGTGTTCGTTCGTATGCCGTCTTCTGCT 3981 0.40916084512629924 Illumina Single End Adapter 1 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3151 0.3238547658862017 No Hit TCTGTCTCTTATACACATCTGACGCGTGTTCGTTCGTATGCCGTCTTCTGC 2253 0.2315597548529395 No Hit ACTGTCTCTTATACACATCTGACGCGTGTTCGTTCGTATGCCGTCTTCTGC 2129 0.2188152321712864 No Hit GGATCAGGGGCTTGAGTTTTCCATACAAAAGATTTTTAAATTGTAATAACT 2013 0.2068929367594173 No Hit CGCTGTCTCTTATACACATCTGACGCGTGTTCGTTCGTATGCCGTCTTCTG 1616 0.16608990849638272 No Hit GCCTGTCTCTTATACACATCTGACGCGTGTTCGTTCGTATGCCGTCTTCTG 1047 0.10760899393299055 No Hit GGCTGTCTCTTATACACATCTGACGCGTGTTCGTTCGTATGCCGTCTTCTG 1013 0.10411452803640822 No Hit ACCTGTCTCTTATACACATCTGACGCGTGTTCGTTCGTATGCCGTCTTCTG 998 0.10257285190556308 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.111136348920364E-4 0.0 0.0 0.4334165495849294 0.0 2 4.111136348920364E-4 0.0 0.0 2.2333748215509877 0.0 3 4.111136348920364E-4 0.0 0.0 3.079241125341353 0.0 4 4.111136348920364E-4 0.0 0.0 3.976599411901945 0.0 5 4.111136348920364E-4 0.0 0.0 6.187465761942594 0.0 6 4.111136348920364E-4 0.0 0.0 7.34896455892132 0.0 7 4.111136348920364E-4 0.0 0.0 8.429268413008868 0.0 8 4.111136348920364E-4 0.0 0.0 10.034564378853547 0.0 9 4.111136348920364E-4 0.0 0.0 10.579495501902942 0.0 10 4.111136348920364E-4 0.0 0.0 12.053954553443232 0.0 11 4.111136348920364E-4 0.0 0.0 14.345296397513996 0.0 12 4.111136348920364E-4 0.0 0.0 15.896839255596541 0.0 13 4.111136348920364E-4 0.0 0.0 16.481751179639186 0.0 14 4.111136348920364E-4 0.0 0.0 16.712385928813617 0.0 15 4.111136348920364E-4 0.0 0.0 17.129974603455203 0.0 16 4.111136348920364E-4 0.0 0.0 18.25663151987683 0.0 17 4.111136348920364E-4 0.0 0.0 19.59583418553764 0.0 18 4.111136348920364E-4 0.0 0.0 21.068134890494743 0.0 19 5.138920436150456E-4 0.0 0.0 21.907320597718115 0.0 20 5.138920436150456E-4 0.0 0.0 22.662125231379893 0.0 21 5.138920436150456E-4 0.0 0.0 23.682406494773204 0.0 22 5.138920436150456E-4 0.0 0.0 24.77802433176048 0.0 23 5.138920436150456E-4 0.0 0.0 25.90725070840018 0.0 24 5.138920436150456E-4 0.0 0.0 26.77685882460556 0.0 25 5.138920436150456E-4 0.0 0.0 27.503707731094682 0.0 26 5.138920436150456E-4 0.0 0.0 28.218737120580656 0.0 27 5.138920436150456E-4 0.0 0.0 28.863877192134986 1.027784087230091E-4 28 5.138920436150456E-4 0.0 0.0 29.556500888519345 1.027784087230091E-4 29 5.138920436150456E-4 0.0 0.0 30.293010965428426 1.027784087230091E-4 30 5.138920436150456E-4 0.0 0.0 31.05614065019677 1.027784087230091E-4 31 5.138920436150456E-4 0.0 0.0 31.80755359637069 1.027784087230091E-4 32 5.138920436150456E-4 0.0 0.0 32.51569683247222 1.027784087230091E-4 33 5.138920436150456E-4 0.0 0.0 33.192081540278345 1.027784087230091E-4 34 5.138920436150456E-4 0.0 0.0 33.83023268003951 1.027784087230091E-4 35 5.138920436150456E-4 0.0 0.0 34.49099506971973 1.027784087230091E-4 36 5.138920436150456E-4 0.0 0.0 35.14980466963422 1.027784087230091E-4 37 5.138920436150456E-4 0.0 0.0 35.77778074693181 1.027784087230091E-4 38 5.138920436150456E-4 0.0 0.0 36.416137443510415 1.027784087230091E-4 39 5.138920436150456E-4 0.0 0.0 37.03373290152698 1.027784087230091E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCCGA 20 7.0327515E-4 45.000004 2 AGCGTCA 20 7.0327515E-4 45.000004 35 CGTGGCG 30 2.1651558E-6 45.000004 27 CAGCGAC 20 7.0327515E-4 45.000004 36 GATACGA 30 2.1651558E-6 45.000004 13 ACCGGTG 20 7.0327515E-4 45.000004 41 ACGCCCG 20 7.0327515E-4 45.000004 13 GATCGAC 20 7.0327515E-4 45.000004 20 CGACGTC 20 7.0327515E-4 45.000004 39 ACGTTCA 20 7.0327515E-4 45.000004 42 GCGCGAA 30 2.1651558E-6 45.000004 35 CGGTTAG 20 7.0327515E-4 45.000004 14 CACGCTT 20 7.0327515E-4 45.000004 24 ATTCGCG 30 2.1651558E-6 45.000004 1 GTCTACG 35 1.2116652E-7 45.000004 1 ATATGCG 30 2.1651558E-6 45.000004 1 CGCGAGA 20 7.0327515E-4 45.000004 26 AAGCGAC 20 7.0327515E-4 45.000004 29 TAACGCG 20 7.0327515E-4 45.000004 1 TCGGCTA 20 7.0327515E-4 45.000004 30 >>END_MODULE