##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934863.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2188378 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.26742454914096 33.0 31.0 34.0 30.0 34.0 2 32.44320222557529 34.0 31.0 34.0 30.0 34.0 3 32.45628177581752 34.0 31.0 34.0 30.0 34.0 4 35.99229337893179 37.0 35.0 37.0 35.0 37.0 5 35.87372154170806 37.0 35.0 37.0 35.0 37.0 6 35.794699544594216 37.0 35.0 37.0 35.0 37.0 7 36.05171135882375 37.0 35.0 37.0 35.0 37.0 8 35.76808439858196 37.0 35.0 37.0 35.0 37.0 9 37.48773657932953 39.0 37.0 39.0 35.0 39.0 10 37.29781006754774 39.0 37.0 39.0 34.0 39.0 11 37.17642473101082 39.0 37.0 39.0 34.0 39.0 12 37.10953043761178 39.0 37.0 39.0 34.0 39.0 13 37.06809381194657 39.0 37.0 39.0 33.0 39.0 14 38.26414129551659 40.0 38.0 41.0 33.0 41.0 15 38.28972051446323 40.0 38.0 41.0 34.0 41.0 16 38.422042718396916 40.0 38.0 41.0 34.0 41.0 17 38.31457682356522 40.0 37.0 41.0 34.0 41.0 18 38.3065754636539 40.0 37.0 41.0 34.0 41.0 19 38.31148823466513 40.0 37.0 41.0 34.0 41.0 20 38.154909709382935 40.0 37.0 41.0 34.0 41.0 21 38.156388430152376 40.0 37.0 41.0 34.0 41.0 22 38.08679579122071 40.0 37.0 41.0 34.0 41.0 23 37.864196222042075 40.0 36.0 41.0 33.0 41.0 24 37.64078143721057 40.0 36.0 41.0 33.0 41.0 25 37.625004912314054 40.0 36.0 41.0 33.0 41.0 26 37.72830836354597 40.0 36.0 41.0 33.0 41.0 27 37.763589288505 40.0 36.0 41.0 33.0 41.0 28 37.67611262770874 40.0 36.0 41.0 33.0 41.0 29 37.680114678542736 40.0 36.0 41.0 33.0 41.0 30 37.57447387974107 40.0 36.0 41.0 33.0 41.0 31 37.51510707930714 40.0 36.0 41.0 33.0 41.0 32 37.40079136236975 40.0 36.0 41.0 32.0 41.0 33 37.2713653674091 40.0 36.0 41.0 32.0 41.0 34 37.19305851182931 40.0 36.0 41.0 32.0 41.0 35 37.116652150588244 40.0 35.0 41.0 32.0 41.0 36 37.03455847207384 40.0 35.0 41.0 31.0 41.0 37 37.02871213291305 40.0 35.0 41.0 31.0 41.0 38 36.88825924954464 40.0 35.0 41.0 31.0 41.0 39 36.904350162540474 39.0 35.0 41.0 31.0 41.0 40 36.80512370349181 39.0 35.0 41.0 31.0 41.0 41 36.71296183748877 39.0 35.0 41.0 31.0 41.0 42 36.66135786413499 39.0 35.0 41.0 31.0 41.0 43 36.58196984250436 39.0 35.0 41.0 31.0 41.0 44 36.62298926419476 39.0 35.0 41.0 31.0 41.0 45 36.57225305683022 39.0 35.0 41.0 31.0 41.0 46 36.502162789061124 39.0 35.0 41.0 31.0 41.0 47 36.34100187444765 39.0 35.0 41.0 30.0 41.0 48 36.30260585694062 39.0 35.0 41.0 30.0 41.0 49 36.27238027434017 39.0 35.0 41.0 30.0 41.0 50 36.13292858911943 39.0 35.0 40.0 30.0 41.0 51 35.28921009076129 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 8.0 9 37.0 10 38.0 11 41.0 12 35.0 13 33.0 14 62.0 15 62.0 16 161.0 17 271.0 18 602.0 19 1228.0 20 2389.0 21 4251.0 22 6694.0 23 9412.0 24 11513.0 25 13885.0 26 16761.0 27 19132.0 28 21203.0 29 25060.0 30 30754.0 31 39616.0 32 51210.0 33 70539.0 34 125676.0 35 160197.0 36 157745.0 37 242821.0 38 439422.0 39 736981.0 40 538.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.52663113959289 20.79179191163501 23.54807990210101 11.133497046671097 2 30.300569645646224 28.499372594679713 24.216108917198035 16.983948842476025 3 30.341878779625826 27.855927997813907 25.530050110172926 16.27214311238735 4 27.532583493345296 24.328886508637904 29.98567889094114 18.15285110707565 5 28.86101030077985 28.622843037171826 23.26060671419654 19.255539947851787 6 25.715712733357766 36.86163907697848 22.71970381716504 14.702944372498719 7 80.08145759096463 4.823572527232498 10.958938538040503 4.136031343762366 8 80.8248392188187 7.916593933954736 7.026939587219393 4.231627260007183 9 75.05357849512288 6.580718687539355 8.220334878160902 10.14536793917687 10 41.721631272111125 29.71904305380515 15.546582902953695 13.012742771130034 11 29.764464822804836 24.643914351176992 26.528643588996054 19.062977237022125 12 27.921684462190715 21.202324278529577 28.962272514163455 21.913718745116245 13 26.140547930933323 21.9962456211861 31.47628060600134 20.386925841879236 14 20.050009641844323 28.222272386214815 27.981409061871393 23.746308910069466 15 18.41628822808491 26.517676562275806 33.50262157634559 21.5634136332937 16 21.359792503854454 26.329317878355567 29.463237155555394 22.847652462234585 17 21.92550829884051 26.472072009497445 29.375683725572088 22.226735966089954 18 21.242628101726485 26.460785111164526 29.00339886436438 23.293187922744607 19 23.07371030050567 27.75023327779753 26.610210850227883 22.565845571468916 20 26.21169651678092 26.918932652402827 28.579888849184194 18.289481981632058 21 24.3701956426175 28.473417298108462 27.946817231757947 19.209569827516088 22 22.5770410779125 24.06234206339124 29.76016940400607 23.600447454690183 23 22.844316658273844 26.965222644351204 28.97479320300241 21.215667494372546 24 23.08422036777924 24.815319839625513 28.844651152588813 23.255808640006435 25 21.655490961799103 29.194636392798685 26.160060099306428 22.989812546095784 26 21.52023096558273 26.92277111175492 28.22515123072888 23.331846691933478 27 23.38887523087876 27.08106186408381 27.08042212085846 22.449640784178968 28 20.019484750806306 28.1549622597193 29.336111037489864 22.489441951984528 29 23.85684740022062 24.755960807502177 27.71650967063277 23.670682121644433 30 22.0925726725456 27.097421012274847 27.638141125527678 23.17186518965188 31 22.66107592015639 27.295558628353966 25.44985372728112 24.593511724208522 32 24.732610179776984 27.6482856252439 25.31285728516737 22.30624690981174 33 23.208787512943378 27.23807312996201 25.865778215646472 23.68736114144814 34 23.31992005037521 26.15690707912436 28.330663166966584 22.19250970353385 35 23.72697952547503 24.765694043716397 26.688579395332983 24.81874703547559 36 22.478200749596276 28.976529648899778 26.972990954944713 21.57227864655923 37 21.737149614920273 27.083757924819203 28.02929841188314 23.149794048377384 38 21.473849581745018 28.606072625478777 25.964664239907364 23.955413552868837 39 22.489670431707868 25.29955976526907 28.274091587467982 23.936678215555084 40 23.476428660862066 25.66229417404123 28.631799442326688 22.229477722770017 41 20.72050623795341 26.014792691207827 29.724800742833274 23.53990032800549 42 22.821148814327323 25.50149014475561 28.541915519165332 23.135445521751727 43 22.60441294876845 25.781149326121906 28.00868954083801 23.60574818427164 44 21.664036103451963 25.80609931191046 27.69690611037033 24.83295847426724 45 21.784673397374675 24.483110321891374 27.236290988119972 26.495925292613983 46 23.604103130263603 26.63666880219048 26.559442655702075 23.19978541184384 47 20.614948605771033 25.802123764724378 31.064880016158085 22.518047613346507 48 21.805647835977148 24.869378142167395 28.822168747812306 24.502805274043148 49 21.35823884173575 24.143863628678407 30.545408517175737 23.952489012410105 50 20.92595520517936 24.386920358365877 29.499656823455545 25.187467612999214 51 20.270218399197944 24.000789625923858 27.84838816694374 27.880603807934463 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 366.0 1 1123.0 2 1880.0 3 5454.5 4 9029.0 5 6434.0 6 3839.0 7 3708.0 8 3577.0 9 3528.5 10 3480.0 11 3441.5 12 3403.0 13 3543.5 14 3684.0 15 3518.5 16 3353.0 17 3600.0 18 3847.0 19 4298.5 20 4750.0 21 5150.0 22 5550.0 23 7495.0 24 9440.0 25 11653.5 26 17077.5 27 20288.0 28 25035.5 29 29783.0 30 34541.5 31 39300.0 32 46384.5 33 53469.0 34 60219.5 35 66970.0 36 70906.0 37 74842.0 38 80477.5 39 86113.0 40 93563.0 41 101013.0 42 106762.0 43 112511.0 44 125045.5 45 137580.0 46 183992.0 47 230404.0 48 211111.0 49 191818.0 50 189514.5 51 187211.0 52 165161.0 53 143111.0 54 130384.0 55 117657.0 56 111949.5 57 106242.0 58 100822.5 59 95403.0 60 96297.5 61 97192.0 62 88311.0 63 79430.0 64 65665.5 65 51901.0 66 43318.0 67 34735.0 68 28148.0 69 21561.0 70 18992.0 71 16423.0 72 13029.0 73 9635.0 74 7889.0 75 4759.0 76 3375.0 77 2814.5 78 2254.0 79 1613.0 80 972.0 81 772.5 82 573.0 83 384.0 84 195.0 85 171.0 86 147.0 87 95.5 88 44.0 89 26.5 90 9.0 91 7.5 92 6.0 93 4.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2188378.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.70890245203552 #Duplication Level Percentage of deduplicated Percentage of total 1 72.05521772945693 14.921844751195037 2 10.980682020350665 4.547957456325244 3 4.332679915033529 2.6917513714896866 4 2.1045510377369663 1.7433176858329986 5 1.2612499745011612 1.3059551344788414 6 0.8273652775516316 1.0280296095010817 7 0.5624560072845668 0.815349261189223 8 0.4251137975177546 0.7042912131047647 9 0.3254116031617811 0.6065025431974036 >10 4.521395715626159 24.058910566417367 >50 2.244803682047706 33.07955172617375 >100 0.35051852067776873 9.394643745032443 >500 0.0047276078978990095 0.6785649870641982 >1k 0.002926614412985101 1.497598287836705 >5k 2.2512418561423857E-4 0.33198634647091413 >10k+ 6.753725568427156E-4 2.5937453146902554 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGCACATGTTCGTATGC 20811 0.9509783044793907 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGCACATGTTCGTATGCCG 17771 0.8120626326895993 No Hit GAATCTGTCTCTTATACACATCTGACGCGCACATGTTCGTATGCCGTCTTC 17053 0.7792529444181947 No Hit GCTGTCTCTTATACACATCTGACGCGCACATGTTCGTATGCCGTCTTCTGC 7121 0.32540082197865267 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGCACATGTT 4283 0.19571573101173564 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4206 0.19219714327232315 No Hit GAATGACTGTCTCTTATACACATCTGACGCGCACATGTTCGTATGCCGTCT 3478 0.15893049555424155 No Hit CCTGTCTCTTATACACATCTGACGCGCACATGTTCGTATGCCGTCTTCTGC 3295 0.15056813768005345 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGCACATGTTCGTA 2777 0.1268976383421877 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGCACATGTTCGTATGCCGTC 2673 0.12214526009674746 No Hit GAACTGTCTCTTATACACATCTGACGCGCACATGTTCGTATGCCGTCTTCT 2595 0.1185809764126673 No Hit CTGTCTCTTATACACATCTGACGCGCACATGTTCGTATGCCGTCTTCTGCT 2320 0.10601459162905129 Illumina Single End Adapter 2 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.8278377867077809E-4 0.0 0.0 0.1133716387205501 0.0 2 1.8278377867077809E-4 0.0 0.0 0.7445240264707468 0.0 3 1.8278377867077809E-4 0.0 0.0 1.0314488630392007 0.0 4 1.8278377867077809E-4 0.0 0.0 1.4564211484487597 0.0 5 1.8278377867077809E-4 0.0 0.0 3.1230436423689145 0.0 6 1.8278377867077809E-4 0.0 0.0 3.6708009311005685 0.0 7 1.8278377867077809E-4 0.0 0.0 4.314976663081058 0.0 8 1.8278377867077809E-4 0.0 0.0 5.1733749836637 0.0 9 1.8278377867077809E-4 0.0 0.0 5.447870523282541 0.0 10 1.8278377867077809E-4 0.0 0.0 6.939249069402087 0.0 11 1.8278377867077809E-4 0.0 0.0 7.9119786435433 0.0 12 1.8278377867077809E-4 0.0 0.0 9.711027985110434 0.0 13 1.8278377867077809E-4 0.0 0.0 10.05438731334349 0.0 14 1.8278377867077809E-4 0.0 0.0 10.209022390098967 0.0 15 1.8278377867077809E-4 0.0 0.0 10.582449649923367 0.0 16 1.8278377867077809E-4 0.0 0.0 11.104525817751778 0.0 17 1.8278377867077809E-4 0.0 0.0 11.718039570860244 0.0 18 2.284797233384726E-4 0.0 0.0 12.312680898820954 0.0 19 2.7417566800616713E-4 0.0 0.0 12.975409184336527 0.0 20 2.7417566800616713E-4 0.0 0.0 13.420624773233875 0.0 21 2.7417566800616713E-4 0.0 0.0 13.941649934334928 0.0 22 2.7417566800616713E-4 0.0 0.0 14.561149856194863 0.0 23 2.7417566800616713E-4 0.0 0.0 15.109592584096532 0.0 24 2.7417566800616713E-4 0.0 0.0 15.555310828385224 0.0 25 2.7417566800616713E-4 0.0 0.0 15.937374621751818 0.0 26 2.7417566800616713E-4 0.0 0.0 16.295585132001875 0.0 27 3.198716126738616E-4 0.0 0.0 16.68994113448408 0.0 28 3.6556755734155617E-4 0.0 0.0 17.059667022790396 0.0 29 4.1126350200925067E-4 0.0 0.0 17.446026234955752 0.0 30 4.1126350200925067E-4 0.0 0.0 17.874105844602713 0.0 31 4.1126350200925067E-4 0.0 0.0 18.264988955290175 0.0 32 4.1126350200925067E-4 0.0 0.0 18.654364099803598 0.0 33 4.1126350200925067E-4 0.0 0.0 19.0218508868212 0.0 34 4.569594466769452E-4 0.0 0.0 19.397060288487637 0.0 35 4.569594466769452E-4 0.0 0.0 19.78488177088236 0.0 36 4.569594466769452E-4 0.0 0.0 20.18111130709594 0.0 37 4.569594466769452E-4 0.0 0.0 20.58785091058309 0.0 38 4.569594466769452E-4 0.0 0.0 20.983989054907333 0.0 39 4.569594466769452E-4 0.0 0.0 21.400827462166042 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCGTTC 20 7.0346874E-4 45.0 12 CCTATCG 20 7.0346874E-4 45.0 1 CGATCGA 185 0.0 42.567566 41 TACGGCT 2355 0.0 41.847134 7 ACGATCG 60 3.6379788E-12 41.250004 40 GTACGAG 180 0.0 40.0 1 CCGATCG 175 0.0 39.857143 40 TCTACGG 130 0.0 39.807693 2 CCGATGA 2310 0.0 39.545456 18 CGTAATG 40 3.4601362E-7 39.375 34 ACCCGTA 40 3.4601362E-7 39.375 31 CGATGAA 2380 0.0 38.94958 19 TGCGTAG 185 0.0 38.91892 1 ACCACCG 3230 0.0 38.86997 14 ACTCGAT 35 6.250879E-6 38.571426 13 CACGTTA 35 6.250879E-6 38.571426 31 CCACCGA 3020 0.0 38.145695 15 GGACGTA 130 0.0 38.076927 8 ACGGCTG 2600 0.0 38.076923 8 TGATACC 2255 0.0 38.01552 4 >>END_MODULE