SRR2934862.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934862.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	878843
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACGGCTGTCTCTTATACACATCTGACGCCCAGAGTTTCGTATGC	8224	0.9357757870290825	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCCCAGAGTTTCGTATGCCG	6944	0.7901297501373965	No Hit
GCTGTCTCTTATACACATCTGACGCCCAGAGTTTCGTATGCCGTCTTCTGC	6263	0.7126415070723667	TruSeq Adapter, Index 14 (95% over 21bp)
GAATCTGTCTCTTATACACATCTGACGCCCAGAGTTTCGTATGCCGTCTTC	6011	0.683967443559316	No Hit
CCTGTCTCTTATACACATCTGACGCCCAGAGTTTCGTATGCCGTCTTCTGC	3181	0.36195315886910406	TruSeq Adapter, Index 14 (95% over 21bp)
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3131	0.35626386055302256	No Hit
CTGTCTCTTATACACATCTGACGCCCAGAGTTTCGTATGCCGTCTTCTGCT	2407	0.2738828209361627	TruSeq Adapter, Index 15 (95% over 23bp)
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCCAGAGTTT	1739	0.19787379543331401	No Hit
GAATGACTGTCTCTTATACACATCTGACGCCCAGAGTTTCGTATGCCGTCT	1455	0.1655585809979712	No Hit
TCTGTCTCTTATACACATCTGACGCCCAGAGTTTCGTATGCCGTCTTCTGC	1438	0.1636242195705035	TruSeq Adapter, Index 14 (95% over 21bp)
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCCAGAGTTTCGTA	1215	0.1382499490807801	No Hit
ACTGTCTCTTATACACATCTGACGCCCAGAGTTTCGTATGCCGTCTTCTGC	1151	0.13096764723619578	TruSeq Adapter, Index 15 (95% over 22bp)
GAATGATCTGTCTCTTATACACATCTGACGCCCAGAGTTTCGTATGCCGTC	1031	0.11731333127760021	No Hit
GAACTGTCTCTTATACACATCTGACGCCCAGAGTTTCGTATGCCGTCTTCT	933	0.10616230657808048	No Hit
CGCTGTCTCTTATACACATCTGACGCCCAGAGTTTCGTATGCCGTCTTCTG	926	0.1053658048138291	TruSeq Adapter, Index 15 (95% over 21bp)

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AACCGGT	30	2.1649157E-6	45.000004	16
AATCCCG	25	3.890053E-5	45.000004	29
GGTACGT	25	3.890053E-5	45.000004	32
ACACGGC	25	3.890053E-5	45.000004	19
ACACGAC	25	3.890053E-5	45.000004	29
CGAGTAC	25	3.890053E-5	45.000004	6
CGACGCA	30	2.1649157E-6	45.000004	22
GACGTAC	30	2.1649157E-6	45.000004	33
CGTTGAT	25	3.890053E-5	45.000004	27
ATTCGGT	30	2.1649157E-6	45.000004	9
TACGGTC	25	3.890053E-5	45.000004	41
CGTTCTA	30	2.1649157E-6	45.000004	19
TAACGAG	30	2.1649157E-6	45.000004	21
CCTAACG	30	2.1649157E-6	45.000004	19
ATCGTAA	30	2.1649157E-6	45.000004	38
TACGCTA	25	3.890053E-5	45.000004	24
CTAACGA	30	2.1649157E-6	45.000004	20
ATATACG	25	3.890053E-5	45.000004	11
GTCGTAA	30	2.1649157E-6	45.000004	43
CATCGAA	30	2.1649157E-6	45.000004	42