SRR2934860.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934860.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	484562
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACGGCTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGC	7137	1.4728765359231635	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGCCG	6298	1.299730478246334	No Hit
GAATCTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGCCGTCTTC	5692	1.174669082594178	No Hit
GCTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGCCGTCTTCTGC	2371	0.48930786978756075	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1844	0.3805498573969895	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGTGAAGCTT	1411	0.2911908073683038	No Hit
CCTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGCCGTCTTCTGC	1351	0.2788084909671002	No Hit
GAATGACTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGCCGTCT	1201	0.2478526999640913	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTA	843	0.17397154543691	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGCCGTC	814	0.16798675917632833	No Hit
CTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGCCGTCTTCTGCT	729	0.15044514427462327	No Hit
GAACTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGCCGTCTTCT	715	0.14755593711434242	No Hit
TATGAAAACTATGCCCTCGTGTACTCCTGCACCACCTTCTTCTGGCTCTTC	643	0.13269715743289817	No Hit
TCTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGCCGTCTTCTGC	513	0.10586880523029045	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCCCCGT	20	7.029242E-4	45.000004	17
CGAACCG	20	7.029242E-4	45.000004	24
ATTAGCG	20	7.029242E-4	45.000004	1
TAGCGGA	20	7.029242E-4	45.000004	45
TAGCGAG	45	3.8380676E-10	45.000004	1
TAGCGAA	20	7.029242E-4	45.000004	13
TTGTCGT	20	7.029242E-4	45.000004	36
CGACCGT	20	7.029242E-4	45.000004	22
CCGTGAC	20	7.029242E-4	45.000004	10
CGATTTA	20	7.029242E-4	45.000004	27
ATCGTCG	20	7.029242E-4	45.000004	20
GTAGCGA	20	7.029242E-4	45.000004	12
TGACCTC	20	7.029242E-4	45.000004	22
GCGGGTT	40	6.8012014E-9	45.000004	5
AGACCGA	20	7.029242E-4	45.000004	20
GTCCGTC	20	7.029242E-4	45.000004	38
ACTAAGC	20	7.029242E-4	45.000004	10
TTACGGA	20	7.029242E-4	45.000004	34
TCGAGTT	20	7.029242E-4	45.000004	37
GGCGCTA	20	7.029242E-4	45.000004	1