##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934858.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1159627 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.27211249824297 33.0 31.0 34.0 30.0 34.0 2 32.44668501164599 34.0 31.0 34.0 31.0 34.0 3 32.452160048015436 34.0 31.0 34.0 30.0 34.0 4 35.9797141667105 37.0 35.0 37.0 35.0 37.0 5 35.88547093160128 37.0 35.0 37.0 35.0 37.0 6 35.80266671955724 37.0 35.0 37.0 35.0 37.0 7 36.069201562226475 37.0 35.0 37.0 35.0 37.0 8 35.85843896356328 37.0 35.0 37.0 35.0 37.0 9 37.5365009610849 39.0 38.0 39.0 35.0 39.0 10 37.344563381156185 39.0 37.0 39.0 34.0 39.0 11 37.24033590111303 39.0 37.0 39.0 34.0 39.0 12 37.1425285889342 39.0 37.0 39.0 34.0 39.0 13 37.04161251850811 39.0 37.0 39.0 33.0 39.0 14 38.21954990699596 40.0 37.0 41.0 33.0 41.0 15 38.285706524598 40.0 37.0 41.0 34.0 41.0 16 38.3959919870786 40.0 37.0 41.0 34.0 41.0 17 38.37754467600358 40.0 37.0 41.0 34.0 41.0 18 38.338407953591975 40.0 37.0 41.0 34.0 41.0 19 38.32625318313561 40.0 37.0 41.0 34.0 41.0 20 38.24597392092457 40.0 37.0 41.0 34.0 41.0 21 38.190125790448135 40.0 37.0 41.0 34.0 41.0 22 38.11431089479635 40.0 37.0 41.0 34.0 41.0 23 37.91528827804113 40.0 36.0 41.0 33.0 41.0 24 37.64413643352561 40.0 36.0 41.0 33.0 41.0 25 37.571966675491346 39.0 36.0 41.0 33.0 41.0 26 37.68482882858022 40.0 36.0 41.0 33.0 41.0 27 37.75292400056225 40.0 36.0 41.0 33.0 41.0 28 37.68375434514719 40.0 36.0 41.0 33.0 41.0 29 37.705089653828345 40.0 36.0 41.0 33.0 41.0 30 37.61707600806121 40.0 36.0 41.0 33.0 41.0 31 37.50149918896335 40.0 36.0 41.0 33.0 41.0 32 37.44401432529598 40.0 36.0 41.0 33.0 41.0 33 37.307008201775226 40.0 35.0 41.0 33.0 41.0 34 37.25500182386233 40.0 35.0 41.0 32.0 41.0 35 37.225469051686446 40.0 35.0 41.0 32.0 41.0 36 37.14766299853315 39.0 35.0 41.0 32.0 41.0 37 37.092294332574184 39.0 35.0 41.0 32.0 41.0 38 37.00828542281268 39.0 35.0 41.0 32.0 41.0 39 37.01473577279591 39.0 35.0 41.0 32.0 41.0 40 36.92093578366147 39.0 35.0 41.0 31.0 41.0 41 36.79521691026511 39.0 35.0 41.0 31.0 41.0 42 36.71329746547812 39.0 35.0 41.0 31.0 41.0 43 36.653756768340166 39.0 35.0 41.0 31.0 41.0 44 36.608680204927964 39.0 35.0 41.0 31.0 41.0 45 36.569986728491145 39.0 35.0 41.0 31.0 41.0 46 36.513655684112216 39.0 35.0 41.0 31.0 41.0 47 36.39042295496741 39.0 35.0 41.0 31.0 41.0 48 36.34201687266681 39.0 35.0 40.0 31.0 41.0 49 36.311923575425546 39.0 35.0 40.0 31.0 41.0 50 36.21777433605806 38.0 35.0 40.0 31.0 41.0 51 35.26554831855415 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 3.0 9 16.0 10 24.0 11 24.0 12 18.0 13 26.0 14 28.0 15 46.0 16 79.0 17 124.0 18 260.0 19 472.0 20 887.0 21 1401.0 22 2206.0 23 3072.0 24 4386.0 25 6062.0 26 8245.0 27 9875.0 28 11379.0 29 13431.0 30 16232.0 31 20611.0 32 26998.0 33 38155.0 34 70565.0 35 94032.0 36 88050.0 37 135548.0 38 241577.0 39 365510.0 40 284.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.70409968032824 21.594616199864266 24.265647488373418 12.435636631434074 2 32.449399677654974 25.021149041890194 24.372578423924242 18.156872856530594 3 31.96933151780702 24.85195670676864 26.113827980893856 17.064883794530484 4 28.49976759768443 25.014422741105548 27.213750628434834 19.272059032775193 5 26.188679635779437 29.14290543424739 24.17535983553332 20.49305509443985 6 25.595040474221452 35.17312032231054 23.98616106730871 15.245678136159299 7 79.35310233376767 5.6215489980830045 9.584461210371956 5.440887457777372 8 79.90069220533844 5.605423123124935 8.576637142805401 5.917247528731221 9 73.69654207775432 6.687150264697182 10.910491045827667 8.705816611720838 10 40.69015295435515 25.770355467749546 18.042439508566115 15.49705206932919 11 30.239033758268825 25.45137358823139 24.637663662539765 19.671928990960026 12 30.209455281741455 20.602486834128563 28.84505103796307 20.343006846166915 13 25.213193552754465 23.24178378047424 30.212301024381116 21.332721642390183 14 19.551286749963566 27.773413347567793 28.541505156399428 24.13379474606921 15 17.849963824574626 26.14797689256977 34.80291507527852 21.199144207577092 16 20.152859497062416 24.61955439119648 32.44215596911766 22.785430142623447 17 20.385520516510912 24.789609072572475 29.231727098454936 25.59314331246168 18 20.595415594842134 26.270774999202327 30.290170891157242 22.843638514798293 19 23.49238160201513 27.15623213326354 26.730664256696336 22.620722008024995 20 25.758713793314573 25.96990239102746 27.915355541048974 20.35602827460899 21 24.547893417452336 26.19980390246174 27.67312247817617 21.579180201909754 22 22.344857441228946 25.35711914262086 26.575010757769522 25.723012658380668 23 22.514394714852276 26.078471784461726 28.078166513887652 23.328966986798342 24 22.68531174248271 24.052906667402535 29.212151838479095 24.049629751635656 25 21.45457116814286 26.82586728318675 26.532065914298304 25.187495634372087 26 20.585584847541494 27.155197317758212 28.40361599031413 23.855601844386168 27 22.369606778731438 27.00092357283851 27.069048926939438 23.56042072149062 28 19.241359506117053 27.840676355414285 28.8490178307335 24.06894630773516 29 20.890165544610465 24.452517921711035 29.101426579408724 25.555889954269777 30 21.289776798918965 25.16369487774948 27.027570072100772 26.518958251230785 31 20.81315802408878 28.049019210487508 25.744398845490835 25.39342391993287 32 21.796491458029177 27.29067191433107 25.332111101242038 25.580725526397714 33 21.075742458566417 25.961020224606706 25.957398370338048 27.00583894648883 34 20.410528557889734 25.32107306918518 29.578648996617012 24.68974937630807 35 20.764349226087354 22.363656589575786 27.701752373823652 29.170241810513208 36 20.30920287299278 26.31311620029544 27.944847782950898 25.43283314376088 37 20.367756183669403 26.803360045945805 28.446388364534457 24.382495405850328 38 19.924510208886133 26.452902528140516 26.158497516873965 27.46408974609939 39 21.985172818501123 23.081732315649774 28.494593520157775 26.43850134569133 40 21.845731429157826 22.552337950047733 31.00039926631581 24.601531354478638 41 18.850716652854754 24.616967352433154 30.424093264472113 26.108222730239984 42 20.646638962355997 24.498739680949132 28.84280893770152 26.011812418993348 43 22.02958365060489 24.55979379576364 28.278575783420013 25.13204677021146 44 21.29072537979885 25.11566219137705 27.08396751714129 26.509644911682805 45 20.37543106533394 23.733148676255382 27.00014746120951 28.891272797201168 46 21.380323155635388 24.549273171459443 27.860510319266453 26.209893353638712 47 19.269471994011866 24.387410779500648 31.807469125848225 24.535648100639257 48 19.871217210361607 22.70816391822543 29.97610438528941 27.444514486123555 49 19.985305619824306 22.71471774975919 31.098965443198544 26.201011187217958 50 19.874666595379374 22.436869786577926 30.17591001244366 27.512553605599045 51 19.081825449045255 22.38909580408183 28.094464858096615 30.43461388877631 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 316.0 1 789.5 2 1263.0 3 3659.0 4 6055.0 5 4265.0 6 2475.0 7 2377.5 8 2280.0 9 2295.0 10 2310.0 11 2292.0 12 2274.0 13 2296.0 14 2318.0 15 2309.0 16 2300.0 17 2216.0 18 2132.0 19 2352.0 20 2572.0 21 2781.5 22 2991.0 23 3427.5 24 3864.0 25 4394.5 26 7127.5 27 9330.0 28 11106.5 29 12883.0 30 15004.5 31 17126.0 32 19223.0 33 21320.0 34 24734.5 35 28149.0 36 29331.5 37 30514.0 38 33559.5 39 36605.0 40 42641.0 41 48677.0 42 53979.5 43 59282.0 44 66216.0 45 73150.0 46 90409.5 47 107669.0 48 114832.0 49 121995.0 50 119632.5 51 117270.0 52 100013.5 53 82757.0 54 73644.5 55 64532.0 56 58775.0 57 53018.0 58 52817.5 59 52617.0 60 52110.0 61 51603.0 62 48838.0 63 46073.0 64 38398.5 65 30724.0 66 24816.0 67 18908.0 68 15795.5 69 12683.0 70 10999.5 71 9316.0 72 7730.5 73 6145.0 74 5208.0 75 3275.5 76 2280.0 77 1785.5 78 1291.0 79 1112.0 80 933.0 81 616.5 82 300.0 83 178.5 84 57.0 85 51.5 86 46.0 87 32.0 88 18.0 89 12.0 90 6.0 91 4.0 92 2.0 93 1.5 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1159627.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.475872960127663 #Duplication Level Percentage of deduplicated Percentage of total 1 69.60998568677854 16.34155180739118 2 12.104533239571788 5.683289691476596 3 5.052774288733779 3.558548618955408 4 2.6974512610334846 2.53300092480633 5 1.56818167101755 1.8407216843604357 6 1.040793009014449 1.4660114674447327 7 0.7408727480322067 1.217484415869733 8 0.5170284646573433 0.9710155642452516 9 0.38318373204334666 0.8096015352453485 >10 4.177588773391076 24.48487300807053 >50 1.9075907948637751 31.061815488808374 >100 0.1910936692628222 6.502038622557203 >500 0.005204885933228387 0.8302758921901888 >1k 0.0033459980999325347 2.208919642115157 >5k 3.7177756665917054E-4 0.4908516364635364 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCTCACCTCTTCGTATGCCGTCTTCTGC 5624 0.48498353349827145 No Hit CCTGTCTCTTATACACATCTGACGCTCACCTCTTCGTATGCCGTCTTCTGC 4281 0.36917043152668916 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTCACCTCTTCGTATGC 3697 0.31880941026726695 No Hit CTGTCTCTTATACACATCTGACGCTCACCTCTTCGTATGCCGTCTTCTGCT 3374 0.2909556262487851 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3349 0.28879976061267976 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTCACCTCTTCGTATGCCG 3316 0.2859540179730206 No Hit GAATCTGTCTCTTATACACATCTGACGCTCACCTCTTCGTATGCCGTCTTC 3230 0.27853784018481803 No Hit TCTGTCTCTTATACACATCTGACGCTCACCTCTTCGTATGCCGTCTTCTGC 1617 0.13944138934329744 No Hit ACTGTCTCTTATACACATCTGACGCTCACCTCTTCGTATGCCGTCTTCTGC 1279 0.11029408594315242 No Hit CGCTGTCTCTTATACACATCTGACGCTCACCTCTTCGTATGCCGTCTTCTG 1166 0.100549573267956 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 8.623462544421611E-5 0.0 0.0 0.30837502058851685 0.0 2 8.623462544421611E-5 0.0 0.0 1.4883234005417258 0.0 3 8.623462544421611E-5 0.0 0.0 2.078944350209162 0.0 4 8.623462544421611E-5 0.0 0.0 2.727601202800556 0.0 5 8.623462544421611E-5 0.0 0.0 4.626228951205862 0.0 6 8.623462544421611E-5 0.0 0.0 5.480469150856266 0.0 7 8.623462544421611E-5 0.0 0.0 6.399644023466166 0.0 8 8.623462544421611E-5 0.0 0.0 7.7272260821798735 0.0 9 8.623462544421611E-5 0.0 0.0 8.173317799602803 0.0 10 8.623462544421611E-5 0.0 0.0 9.546431740551057 0.0 11 8.623462544421611E-5 0.0 0.0 11.191443455524922 0.0 12 8.623462544421611E-5 0.0 0.0 12.768157347146971 0.0 13 8.623462544421611E-5 0.0 0.0 13.293326216102246 0.0 14 8.623462544421611E-5 0.0 0.0 13.501065428797363 0.0 15 8.623462544421611E-5 0.0 0.0 13.949830419609064 0.0 16 8.623462544421611E-5 0.0 0.0 14.773457327226772 0.0 17 8.623462544421611E-5 0.0 0.0 15.698151215865101 0.0 18 8.623462544421611E-5 0.0 0.0 16.68872835834281 0.0 19 8.623462544421611E-5 0.0 0.0 17.35402849364494 0.0 20 8.623462544421611E-5 0.0 0.0 17.94025147741472 0.0 21 8.623462544421611E-5 0.0 0.0 18.710412917257013 0.0 22 8.623462544421611E-5 0.0 0.0 19.550251934458235 0.0 23 8.623462544421611E-5 0.0 0.0 20.352320185714888 0.0 24 8.623462544421611E-5 0.0 0.0 20.980194493574228 0.0 25 8.623462544421611E-5 0.0 0.0 21.542616720721405 0.0 26 8.623462544421611E-5 0.0 0.0 22.019580434053363 0.0 27 1.7246925088843223E-4 0.0 0.0 22.494733220250996 0.0 28 1.7246925088843223E-4 0.0 0.0 23.012658380668956 0.0 29 4.311731272210806E-4 0.0 0.0 23.519373039779172 0.0 30 4.311731272210806E-4 0.0 0.0 24.07325803900737 0.0 31 4.311731272210806E-4 0.0 0.0 24.60955117464495 0.0 32 4.311731272210806E-4 0.0 0.0 25.12212978828537 0.0 33 4.311731272210806E-4 0.0 0.0 25.60564733315109 0.0 34 4.311731272210806E-4 0.0 0.0 26.088733704889588 0.0 35 4.311731272210806E-4 0.0 0.0 26.581564589303284 0.0 36 5.174077526652967E-4 0.0 0.0 27.087761840660832 0.0 37 5.174077526652967E-4 0.0 0.0 27.59982304654859 0.0 38 5.174077526652967E-4 0.0 0.0 28.076528056004214 0.0 39 5.174077526652967E-4 0.0 0.0 28.5441784297882 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGCGAG 25 3.8908263E-5 45.000004 15 CTTCGAT 30 2.1655178E-6 45.000004 29 TCGTTTA 30 2.1655178E-6 45.000004 38 TCGTTAC 30 2.1655178E-6 45.000004 42 TCGATAA 25 3.8908263E-5 45.000004 42 TACGACT 30 2.1655178E-6 45.000004 24 AACGCAT 25 3.8908263E-5 45.000004 45 GAACGAC 30 2.1655178E-6 45.000004 44 ACGTAAG 25 3.8908263E-5 45.000004 1 GATTACG 30 2.1655178E-6 45.000004 1 CTCCGTA 20 7.033314E-4 45.0 31 CGTCTTA 20 7.033314E-4 45.0 40 ATTCGAC 20 7.033314E-4 45.0 10 CGTTAGA 20 7.033314E-4 45.0 11 CGAATTA 20 7.033314E-4 45.0 30 GGACGAT 40 6.8157533E-9 45.0 8 TACGTCC 20 7.033314E-4 45.0 45 ACGAAAC 20 7.033314E-4 45.0 24 CGTTTTT 2060 0.0 41.286407 1 AGTAACG 60 3.6379788E-12 41.250004 1 >>END_MODULE