SRR2934857.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934857.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1032357
Sequences flagged as poor quality	0
Sequence length	51
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTTCTGC	4147	0.40170212436201824	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3198	0.30977655985284164	No Hit
CCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTTCTGC	2722	0.26366847902421353	No Hit
CTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTTCTGCT	2098	0.20322427222365905	No Hit
TCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTTCTGC	1365	0.1322217023762129	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCCGCAA	30	2.165285E-6	45.000004	33
GCGTTAG	30	2.165285E-6	45.000004	1
CTCGCGA	30	2.165285E-6	45.000004	27
ATCTCGA	25	3.8905288E-5	45.0	26
GCGACGA	25	3.8905288E-5	45.0	13
ACGTTTC	20	7.032954E-4	45.0	12
GCGAATT	20	7.032954E-4	45.0	14
CTATCGG	35	1.2117744E-7	45.0	2
GCGAAAA	35	1.2117744E-7	45.0	39
CACATCG	20	7.032954E-4	45.0	14
TCTAGCG	40	6.8139343E-9	45.0	1
GTAATAC	35	1.2117744E-7	45.0	31
CCCCGTA	20	7.032954E-4	45.0	43
TATCTCG	25	3.8905288E-5	45.0	25
AATTGCG	35	1.2117744E-7	45.0	1
CGTAGAA	25	3.8905288E-5	45.0	43
CGCTAAG	25	3.8905288E-5	45.0	15
ACGGACT	20	7.032954E-4	45.0	12
AACGAGT	20	7.032954E-4	45.0	30
CGTACGC	20	7.032954E-4	45.0	13