##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934856.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 918019 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.286938505630054 33.0 31.0 34.0 30.0 34.0 2 32.46043273614163 34.0 31.0 34.0 31.0 34.0 3 32.469747358170146 34.0 31.0 34.0 30.0 34.0 4 35.988731170052034 37.0 35.0 37.0 35.0 37.0 5 35.89294230293709 37.0 35.0 37.0 35.0 37.0 6 35.826223640251456 37.0 35.0 37.0 35.0 37.0 7 36.112663245531955 37.0 35.0 37.0 35.0 37.0 8 35.885459886995804 37.0 35.0 37.0 35.0 37.0 9 37.59718589702392 39.0 38.0 39.0 35.0 39.0 10 37.393956987818335 39.0 37.0 39.0 34.0 39.0 11 37.280139082088716 39.0 37.0 39.0 34.0 39.0 12 37.099319295134414 39.0 37.0 39.0 34.0 39.0 13 36.994822547245754 39.0 37.0 39.0 33.0 39.0 14 38.14673007857136 40.0 37.0 41.0 33.0 41.0 15 38.22828830340113 40.0 37.0 41.0 33.0 41.0 16 38.329507341351324 40.0 37.0 41.0 34.0 41.0 17 38.31584858265461 40.0 37.0 41.0 34.0 41.0 18 38.278525825718205 40.0 37.0 41.0 34.0 41.0 19 38.256234348090835 40.0 37.0 41.0 34.0 41.0 20 38.16557282583476 40.0 36.0 41.0 34.0 41.0 21 38.10916331797054 40.0 36.0 41.0 34.0 41.0 22 38.05873734639479 40.0 36.0 41.0 34.0 41.0 23 37.886606922078954 40.0 36.0 41.0 34.0 41.0 24 37.630757097619984 39.0 35.0 41.0 33.0 41.0 25 37.60160955274346 39.0 35.0 41.0 33.0 41.0 26 37.745493284997366 40.0 35.0 41.0 33.0 41.0 27 37.809068221899544 40.0 36.0 41.0 34.0 41.0 28 37.77029342529948 40.0 36.0 41.0 34.0 41.0 29 37.79219711138876 40.0 36.0 41.0 34.0 41.0 30 37.695608696552036 40.0 36.0 41.0 33.0 41.0 31 37.60200932660435 40.0 35.0 41.0 33.0 41.0 32 37.43311739735234 40.0 35.0 41.0 33.0 41.0 33 37.30948596924465 40.0 35.0 41.0 33.0 41.0 34 37.23514654925443 40.0 35.0 41.0 33.0 41.0 35 37.08752324298299 39.0 35.0 41.0 32.0 41.0 36 37.0343358906515 39.0 35.0 41.0 32.0 41.0 37 36.99878433888623 39.0 35.0 41.0 32.0 41.0 38 36.89254579698242 39.0 35.0 41.0 31.0 41.0 39 36.933190925242286 39.0 35.0 41.0 32.0 41.0 40 36.793263538118495 39.0 35.0 41.0 31.0 41.0 41 36.69560760724996 39.0 35.0 41.0 31.0 41.0 42 36.601878610355556 39.0 35.0 41.0 31.0 41.0 43 36.59022961398402 39.0 35.0 41.0 31.0 41.0 44 36.58837888976154 39.0 35.0 41.0 31.0 41.0 45 36.540630422681886 39.0 35.0 41.0 31.0 41.0 46 36.47441392825203 39.0 35.0 41.0 31.0 41.0 47 36.31715792374668 39.0 35.0 41.0 31.0 41.0 48 36.24308865067063 38.0 35.0 40.0 31.0 41.0 49 36.22895386696789 38.0 35.0 40.0 31.0 41.0 50 36.131478760243525 38.0 35.0 40.0 31.0 41.0 51 35.24935213759192 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 3.0 9 10.0 10 19.0 11 9.0 12 5.0 13 19.0 14 22.0 15 39.0 16 49.0 17 92.0 18 201.0 19 365.0 20 659.0 21 1097.0 22 1790.0 23 2561.0 24 3677.0 25 5229.0 26 6877.0 27 8196.0 28 9202.0 29 10228.0 30 12293.0 31 15796.0 32 20906.0 33 29806.0 34 58325.0 35 83249.0 36 65321.0 37 101781.0 38 188987.0 39 290974.0 40 231.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.149672283471254 20.822444851359286 24.23631754898319 12.791565316186265 2 31.563725805239322 25.132595294868626 25.66373898579441 17.63993991409764 3 30.869077873115913 25.15536170819994 26.99203393393819 16.98352648474596 4 28.443420016361316 24.468556751004066 28.36804031289113 18.71998291974349 5 26.37788542502933 29.27891470655836 24.823887087304293 19.519312781108017 6 24.87399498267465 34.69481568464269 24.676613446998374 15.754575885684282 7 79.70760953749323 5.4534818996120995 10.302183288145454 4.536725274749216 8 79.13060622928285 6.276558546173881 9.06822189954674 5.524613324996541 9 74.04302089608167 6.578513080883947 11.248133208571936 8.130332814462445 10 40.588266691647995 25.405356534015088 18.887953299441516 15.118423474895401 11 31.474403035231298 25.560799939870527 23.951682917238095 19.01311410766008 12 29.125432044434813 21.692797207900927 28.843302807458233 20.33846794020603 13 23.34722919678133 25.876588610911107 30.538038973049574 20.23814321925799 14 18.94405235621485 30.722566744261286 28.79482886519778 21.538552034326088 15 17.742116448570236 25.529645900575044 36.82178691290704 19.90645073794769 16 19.758087795568503 24.87334140143069 33.235695557499355 22.132875245501456 17 20.25208628579583 25.28313684139435 28.698316701506176 25.766460171303645 18 20.710464598227272 26.427121878741072 31.052843132876333 21.809570390155322 19 23.97826188782585 26.20893467346536 27.798553188986286 22.0142502497225 20 25.445442850311377 27.056411686468362 28.630017461512235 18.868128001708026 21 22.533956268878967 28.112925767331614 29.171073801304765 20.182044162484654 22 22.4132615991608 24.775957796080473 28.076216287462458 24.734564317296265 23 20.896844182963534 26.249565640798284 28.7154187440565 24.138171432181686 24 21.13039054747233 24.273571679888978 31.717317397570206 22.87872037506849 25 20.368423747220916 27.574919473344234 29.197325981270538 22.859330798164308 26 19.545020310037156 28.94406324923558 29.05473633987968 22.456180100847586 27 21.8301581993401 27.279282890659122 29.509193164847353 21.38136574515342 28 17.534168682783253 26.383985516639637 31.65457359814993 24.427272202427183 29 18.881090696379925 25.066365728813896 32.08038177859064 23.972161796215545 30 21.46437056313649 26.129524552324078 29.7092979557068 22.69680692883263 31 23.556266264641582 25.94717538525891 26.36949779906516 24.127060551034347 32 23.054642659901376 25.858070475665535 27.623611276019343 23.46367558841375 33 23.255945683041418 25.765479799437703 27.908790558801073 23.069783958719807 34 22.243330475730893 23.860835124327494 29.352333666296666 24.543500733644947 35 21.489642371236325 22.88318651356889 31.093038379379944 24.534132735814836 36 22.799963835171166 25.427469366102446 30.193819517896685 21.5787472808297 37 21.388228348215016 25.65197452340311 30.922889395535385 22.03690773284649 38 20.75774030820713 25.77778891286564 27.409236628000073 26.05523415092716 39 24.006256951108856 23.59036141953489 29.07935456673555 23.324027062620708 40 24.45058326679513 23.24712233624794 30.827357603709725 21.4749367932472 41 20.195660438400513 24.54404538468158 30.472898709068115 24.787395467849795 42 20.20448378519399 23.3673812851368 31.855331970253335 24.572802959415874 43 21.479185071332946 24.02771620195225 30.80110542374395 23.691993302970854 44 21.0775593969188 24.303854277525847 28.844936760568135 25.773649564987217 45 21.774821654018055 23.694389767532044 27.33854092344494 27.192247655004962 46 23.39450490676119 24.465506705198912 28.61302434916924 23.526964038870656 47 20.937366220089125 23.46367558841375 32.62873644227407 22.970221749223054 48 20.23988610257522 22.39005946500018 32.07754959320014 25.29250483922446 49 21.40816257615583 22.003139368575162 33.16075157485847 23.427946480410537 50 20.796846252637472 22.010655552880714 31.43235597520313 25.760142219278688 51 20.59031457954574 22.13396454757472 28.586009657752182 28.689711215127357 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 576.0 1 739.0 2 902.0 3 3688.0 4 6474.0 5 4497.0 6 2520.0 7 2420.0 8 2320.0 9 2258.5 10 2197.0 11 2202.5 12 2208.0 13 2203.5 14 2199.0 15 2140.0 16 2081.0 17 2077.0 18 2073.0 19 2237.0 20 2401.0 21 2604.5 22 2808.0 23 3194.0 24 3580.0 25 4442.5 26 6643.0 27 7981.0 28 10149.5 29 12318.0 30 13538.0 31 14758.0 32 16894.0 33 19030.0 34 19613.5 35 20197.0 36 23583.5 37 26970.0 38 29713.0 39 32456.0 40 36630.0 41 40804.0 42 45462.0 43 50120.0 44 57892.0 45 65664.0 46 77484.0 47 89304.0 48 93250.0 49 97196.0 50 95083.5 51 92971.0 52 81103.5 53 69236.0 54 60456.0 55 51676.0 56 46550.5 57 41425.0 58 37755.0 59 34085.0 60 34026.0 61 33967.0 62 31491.0 63 29015.0 64 24214.0 65 19413.0 66 16503.0 67 13593.0 68 10241.0 69 6889.0 70 5703.0 71 4517.0 72 3626.0 73 2735.0 74 2229.5 75 1460.5 76 1197.0 77 971.5 78 746.0 79 513.0 80 280.0 81 169.5 82 59.0 83 44.0 84 29.0 85 21.0 86 13.0 87 8.5 88 4.0 89 2.0 90 0.0 91 0.5 92 1.0 93 1.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 918019.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.16201680867042 #Duplication Level Percentage of deduplicated Percentage of total 1 68.69044115162326 15.223187113972608 2 12.26226512074335 5.435130514365742 3 5.395037482491805 3.58694734111171 4 2.9676115612334937 2.630730292066454 5 1.845428630723819 2.0449210166651457 6 1.180155452591497 1.5692774986306082 7 0.8183805994314222 1.2695875220342265 8 0.5955627485140962 1.0559097314549883 9 0.44099085036584107 0.8795921974449868 >10 3.5013686850225505 17.69966577203608 >50 1.6493732127306613 26.844129935227013 >100 0.6449312803447973 18.303056301879288 >500 0.003480739369632676 0.4967829164416176 >1k 0.004972484813760966 2.961081846669535 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCTTCCGGTTTCGTATGCCGTCTTCTGC 4616 0.5028218370208024 TruSeq Adapter, Index 21 (95% over 23bp) CCTGTCTCTTATACACATCTGACGCTTCCGGTTTCGTATGCCGTCTTCTGC 3640 0.39650595466978356 TruSeq Adapter, Index 21 (95% over 23bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3616 0.39389162969393876 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTTCCGGTTTCGTATGC 3395 0.36981805387470196 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTTCCGGTTTCGTATGCCG 2947 0.32101732099226704 No Hit CTGTCTCTTATACACATCTGACGCTTCCGGTTTCGTATGCCGTCTTCTGCT 2447 0.2665522173288353 Illumina Paired End PCR Primer 2 (95% over 21bp) GAATCTGTCTCTTATACACATCTGACGCTTCCGGTTTCGTATGCCGTCTTC 2406 0.2620860788284338 No Hit TCTGTCTCTTATACACATCTGACGCTTCCGGTTTCGTATGCCGTCTTCTGC 1559 0.16982219322258038 TruSeq Adapter, Index 21 (95% over 23bp) ACTGTCTCTTATACACATCTGACGCTTCCGGTTTCGTATGCCGTCTTCTGC 1242 0.1352913174999646 No Hit CGCTGTCTCTTATACACATCTGACGCTTCCGGTTTCGTATGCCGTCTTCTG 1002 0.10914806774151734 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.267906219805908E-4 0.0 0.0 0.27940598179340514 0.0 2 3.267906219805908E-4 0.0 0.0 1.5535626168957288 0.0 3 3.267906219805908E-4 0.0 0.0 2.1463608051685203 0.0 4 3.267906219805908E-4 0.0 0.0 2.828046042620033 0.0 5 3.267906219805908E-4 0.0 0.0 4.7564375029275 0.0 6 3.267906219805908E-4 0.0 0.0 5.670361942399885 0.0 7 3.267906219805908E-4 0.0 0.0 6.619579769046174 0.0 8 3.267906219805908E-4 0.0 0.0 8.00756847080507 0.0 9 3.267906219805908E-4 0.0 0.0 8.470303991529587 0.0 10 3.267906219805908E-4 0.0 0.0 9.915481052135087 0.0 11 3.267906219805908E-4 0.0 0.0 11.647580278839545 0.0 12 3.267906219805908E-4 0.0 0.0 13.332185935149491 0.0 13 3.267906219805908E-4 0.0 0.0 13.896008688273337 0.0 14 3.267906219805908E-4 0.0 0.0 14.105045756133588 0.0 15 3.267906219805908E-4 0.0 0.0 14.544252352075501 0.0 16 3.267906219805908E-4 0.0 0.0 15.419833358568832 0.0 17 3.267906219805908E-4 0.0 0.0 16.40968215254804 0.0 18 3.267906219805908E-4 0.0 0.0 17.53493119423454 0.0 19 3.267906219805908E-4 0.0 0.0 18.240581077297964 0.0 20 4.357208293074544E-4 0.0 0.0 18.873683442281695 0.0 21 4.357208293074544E-4 0.0 0.0 19.637719916472317 0.0 22 4.357208293074544E-4 0.0 0.0 20.4316032674705 0.0 23 4.357208293074544E-4 0.0 0.0 21.22733843199324 0.0 24 4.357208293074544E-4 0.0 0.0 21.891812696687104 0.0 25 4.357208293074544E-4 0.0 0.0 22.43450298958954 0.0 26 4.357208293074544E-4 0.0 0.0 22.89636706865544 0.0 27 5.44651036634318E-4 0.0 0.0 23.354745381086882 0.0 28 6.535812439611816E-4 0.0 0.0 23.858765450388283 0.0 29 6.535812439611816E-4 0.0 0.0 24.385878723642975 0.0 30 6.535812439611816E-4 0.0 0.0 24.98619309622132 0.0 31 6.535812439611816E-4 0.0 0.0 25.53694422446594 0.0 32 6.535812439611816E-4 0.0 0.0 26.073534425758073 0.0 33 7.625114512880452E-4 0.0 0.0 26.54138966622695 0.0 34 7.625114512880452E-4 0.0 0.0 27.04192396889389 0.0 35 7.625114512880452E-4 0.0 0.0 27.557926361001243 0.0 36 7.625114512880452E-4 0.0 0.0 28.095932654988623 0.0 37 7.625114512880452E-4 0.0 0.0 28.596684818070216 0.0 38 7.625114512880452E-4 0.0 0.0 29.08654396041912 0.0 39 7.625114512880452E-4 0.0 0.0 29.57237268509693 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGAT 20 7.032543E-4 45.000004 24 AACGTCA 20 7.032543E-4 45.000004 44 GTCGCGA 20 7.032543E-4 45.000004 21 TCGTTAA 20 7.032543E-4 45.000004 20 TCGCACT 20 7.032543E-4 45.000004 45 TCGCAAT 25 3.890189E-5 45.000004 42 CGTATTG 20 7.032543E-4 45.000004 12 GGTCGTA 20 7.032543E-4 45.000004 32 GCGAATC 20 7.032543E-4 45.000004 45 TTAGCGT 20 7.032543E-4 45.000004 16 CGTGCCG 20 7.032543E-4 45.000004 31 TAGCGTC 20 7.032543E-4 45.000004 17 TAGAACG 20 7.032543E-4 45.000004 1 CCAATAG 20 7.032543E-4 45.000004 43 CACGCAT 20 7.032543E-4 45.000004 37 GCGCCTA 20 7.032543E-4 45.000004 28 TTCGTTC 25 3.890189E-5 45.000004 18 ATGCTCG 20 7.032543E-4 45.000004 1 CGCGAAT 20 7.032543E-4 45.000004 44 CATTCGT 20 7.032543E-4 45.000004 22 >>END_MODULE