##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934853.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1157624 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.45256145345984 33.0 31.0 34.0 31.0 34.0 2 32.62415948529056 34.0 31.0 34.0 31.0 34.0 3 32.61980574003303 34.0 31.0 34.0 31.0 34.0 4 36.12386146106162 37.0 35.0 37.0 35.0 37.0 5 36.02562144530521 37.0 35.0 37.0 35.0 37.0 6 35.962887777032954 37.0 35.0 37.0 35.0 37.0 7 36.18955982253305 37.0 36.0 37.0 35.0 37.0 8 35.97955208254148 37.0 36.0 37.0 35.0 37.0 9 37.65532158973898 39.0 38.0 39.0 35.0 39.0 10 37.50429845960346 39.0 37.0 39.0 35.0 39.0 11 37.37567638542394 39.0 37.0 39.0 35.0 39.0 12 37.21633276435181 39.0 37.0 39.0 34.0 39.0 13 37.139505573485 39.0 37.0 39.0 33.0 39.0 14 38.36467540410358 40.0 38.0 41.0 34.0 41.0 15 38.430126707808405 40.0 38.0 41.0 34.0 41.0 16 38.52847729487295 40.0 38.0 41.0 35.0 41.0 17 38.51099061526022 40.0 38.0 41.0 34.0 41.0 18 38.47932230154178 40.0 38.0 41.0 34.0 41.0 19 38.458769859643546 40.0 37.0 41.0 34.0 41.0 20 38.40360427910962 40.0 37.0 41.0 34.0 41.0 21 38.345913699094005 40.0 37.0 41.0 34.0 41.0 22 38.28616718381789 40.0 37.0 41.0 34.0 41.0 23 38.137442727517744 40.0 36.0 41.0 34.0 41.0 24 37.92892424483252 40.0 36.0 41.0 34.0 41.0 25 37.85032704919732 40.0 36.0 41.0 34.0 41.0 26 37.96403495435478 40.0 36.0 41.0 34.0 41.0 27 38.01474399286815 40.0 36.0 41.0 34.0 41.0 28 37.97039453224881 40.0 36.0 41.0 34.0 41.0 29 37.96840165718748 40.0 36.0 41.0 34.0 41.0 30 37.853759078941 40.0 36.0 41.0 34.0 41.0 31 37.79102109147703 40.0 36.0 41.0 34.0 41.0 32 37.658814952005145 40.0 36.0 41.0 33.0 41.0 33 37.56461769970215 40.0 36.0 41.0 33.0 41.0 34 37.481424884072894 40.0 35.0 41.0 33.0 41.0 35 37.356150183479265 40.0 35.0 41.0 33.0 41.0 36 37.31754006482243 40.0 35.0 41.0 33.0 41.0 37 37.23670466403599 40.0 35.0 41.0 33.0 41.0 38 37.16039404849934 39.0 35.0 41.0 33.0 41.0 39 37.18750215959586 39.0 35.0 41.0 33.0 41.0 40 37.06867860376081 39.0 35.0 41.0 32.0 41.0 41 36.95281023890313 39.0 35.0 41.0 32.0 41.0 42 36.87703952233195 39.0 35.0 41.0 32.0 41.0 43 36.8626566138919 39.0 35.0 41.0 32.0 41.0 44 36.81689996060897 39.0 35.0 41.0 32.0 41.0 45 36.77770070420102 39.0 35.0 41.0 32.0 41.0 46 36.71279189097669 39.0 35.0 41.0 32.0 41.0 47 36.587606165732566 39.0 35.0 41.0 31.0 41.0 48 36.51494785871751 39.0 35.0 41.0 31.0 41.0 49 36.4623789762479 39.0 35.0 41.0 31.0 41.0 50 36.37207677104137 38.0 35.0 40.0 31.0 41.0 51 35.43066228758215 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 5.0 9 28.0 10 34.0 11 31.0 12 21.0 13 23.0 14 29.0 15 55.0 16 74.0 17 154.0 18 235.0 19 431.0 20 690.0 21 1158.0 22 1716.0 23 2561.0 24 3671.0 25 5256.0 26 7131.0 27 8640.0 28 9817.0 29 11149.0 30 13741.0 31 17969.0 32 23940.0 33 35121.0 34 71128.0 35 98255.0 36 82224.0 37 131161.0 38 238465.0 39 392380.0 40 330.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.39606297035998 20.870075257596593 24.269797447184924 12.464064324858503 2 32.232227389895165 24.55598709079978 24.758989101815445 18.452796417489616 3 31.46781683862809 24.715538033074644 26.683448166243963 17.13319696205331 4 29.936749756397585 24.97658998085734 26.339294969696553 18.74736529304852 5 26.00585336862401 29.850625073426258 23.43731643435174 20.70620512359799 6 26.770263919891086 34.25525040945938 23.95181855248336 15.022667118166174 7 81.90137730385688 5.714981721180625 7.805556899304092 4.578084075658417 8 82.53612571957734 5.266304084918764 7.581218081173162 4.6163521143307324 9 76.73743806279069 7.190244846340435 9.289544791745852 6.782772299123032 10 42.55682328631749 26.968601203845115 16.360666330345605 14.113909179491788 11 32.54657816354879 25.098995874308066 23.519899380109603 18.834526582033543 12 30.736923215137214 22.383865572932145 27.48517653400413 19.394034677926513 13 24.86541398588834 24.608508462160426 29.187197224660167 21.338880327291072 14 20.685645770993 28.453625702300574 27.85723170908689 23.00349681761954 15 20.19351706599034 26.254293276573392 33.08544052300228 20.46674913443398 16 22.396995915772305 24.074051678265135 32.56584175863665 20.9631106473259 17 22.129033261231626 24.61058167418782 28.446369460204696 24.81401560437586 18 22.60068899746377 26.50161019467461 28.856087987118446 22.04161282074318 19 25.37922503334416 27.49917071518904 25.708952129534286 21.41265212193251 20 27.344543651479235 25.975273491219948 27.027428595122423 19.652754262178394 21 25.255091463203943 26.669194833555625 26.8181205641901 21.257593139050332 22 23.24424856430067 25.743592047158664 26.214297561211588 24.797861827329083 23 22.99079839395175 26.393716785415645 27.86872075907203 22.746764061560576 24 23.523959420329916 23.722555855787373 29.492304928024986 23.26117979585772 25 22.71756632550811 26.13171461545372 26.729663517687953 24.421055541350214 26 21.744020510977656 27.812312115160015 27.905174737220374 22.538492636641948 27 22.316486182041835 28.51228032590893 27.798490701644056 21.372742790405177 28 20.751211101359335 27.482671402804364 29.752406653628466 22.013710842207832 29 22.15598501758775 25.966635107772472 29.027646282385298 22.849733592254477 30 23.361730579186332 27.895326980090253 26.623152249780585 22.11979019094283 31 24.943159436915614 27.26334284707297 25.65323455629807 22.140263159713346 32 25.577216781960292 28.193005673690248 25.567196257161218 20.662581287188242 33 25.83438145719163 28.042179498697333 24.97676274852629 21.146676295584747 34 24.335621929054685 25.83135802298501 27.886515828973828 21.946504218986476 35 23.209695030510773 25.79810024671223 27.963829360828736 23.028375361948267 36 25.074894784489608 28.193005673690248 25.980974824295284 20.75112471752486 37 24.059711961742327 29.188838517515187 26.78633131310339 19.965118207639097 38 23.67400814081256 27.55126016737732 26.233733923968405 22.540997767841716 39 26.206868551446753 25.407731698720827 26.376958321527542 22.008441428304874 40 25.36393509464213 24.926660124530937 28.754414213941658 20.954990566885275 41 21.551039024761064 26.037297084372817 29.39849208378541 23.01317180708071 42 23.036495442388894 26.109082050821335 27.7668742182263 23.08754828856347 43 24.287419749417776 25.422676102084964 26.866927430668337 23.422976717828934 44 23.091953864121685 25.925689170231443 27.298155532366298 23.684201433280585 45 22.94406473950091 26.022698216346583 26.238571418698992 24.794665625453515 46 23.54944265149997 26.948560154246977 26.837297775443496 22.664699418809562 47 22.699944023275258 25.793435519650593 29.259241342612107 22.247379114462035 48 23.43057849526271 24.757434192794896 28.86023441117323 22.95175290076916 49 22.96298279925088 25.179332840369582 28.90714083329302 22.950543527086513 50 21.783843458670518 25.089148117177945 29.287748007988778 23.839260416162762 51 21.57064815518683 24.470207943166347 27.46496271673704 26.49418118490978 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 404.0 1 883.5 2 1363.0 3 3494.0 4 5625.0 5 4002.0 6 2379.0 7 2267.0 8 2155.0 9 2196.0 10 2237.0 11 2249.0 12 2261.0 13 2243.0 14 2225.0 15 2099.0 16 1973.0 17 1987.5 18 2002.0 19 2376.0 20 2750.0 21 3011.0 22 3272.0 23 3876.0 24 4480.0 25 5430.0 26 7829.5 27 9279.0 28 11576.0 29 13873.0 30 16591.5 31 19310.0 32 21173.5 33 23037.0 34 27127.0 35 31217.0 36 33757.0 37 36297.0 38 37567.5 39 38838.0 40 46425.0 41 54012.0 42 58906.0 43 63800.0 44 69718.5 45 75637.0 46 83555.5 47 91474.0 48 97967.5 49 104461.0 50 102018.5 51 99576.0 52 90885.0 53 82194.0 54 74481.5 55 66769.0 56 63335.5 57 59902.0 58 59161.5 59 58421.0 60 56511.5 61 54602.0 62 50653.0 63 46704.0 64 39345.0 65 31986.0 66 25881.5 67 19777.0 68 16980.5 69 14184.0 70 11450.0 71 8716.0 72 7686.0 73 6656.0 74 5121.5 75 2792.0 76 1997.0 77 1471.0 78 945.0 79 668.5 80 392.0 81 372.5 82 353.0 83 221.5 84 90.0 85 53.5 86 17.0 87 12.5 88 8.0 89 6.5 90 5.0 91 3.0 92 1.0 93 0.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1157624.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.568849872255065 #Duplication Level Percentage of deduplicated Percentage of total 1 71.00380580765405 15.314704278240427 2 11.652594950729798 5.026661422289768 3 4.5732502167920766 2.9591924206273865 4 2.318105051061529 1.9999543933784911 5 1.3789699827767268 1.4871398268428686 6 0.9002519453189276 1.1650439433473718 7 0.6290720821889813 0.9497852909692727 8 0.47635751610754956 0.821958700035525 9 0.37290642377165284 0.7238846403657279 >10 4.101190049901383 22.246320137500167 >50 2.1453625815567 33.38872734084058 >100 0.4400223805182203 11.933711326873974 >500 0.005677708135718971 0.8565316600166382 >1k 0.0024333034867367017 1.1263846186717985 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCTAGAGGTGTCGTATGCCGTCTTCTGC 3227 0.27876063385002386 TruSeq Adapter, Index 21 (95% over 22bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2835 0.24489817073592118 No Hit CCTGTCTCTTATACACATCTGACGCTAGAGGTGTCGTATGCCGTCTTCTGC 2797 0.24161558502588057 TruSeq Adapter, Index 21 (95% over 22bp) CTGTCTCTTATACACATCTGACGCTAGAGGTGTCGTATGCCGTCTTCTGCT 1954 0.16879401256366489 TruSeq Adapter, Index 15 (95% over 22bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.7276766894950348E-4 0.0 0.0 0.17691409300429156 0.0 2 1.7276766894950348E-4 0.0 0.0 0.8941590706481551 0.0 3 1.7276766894950348E-4 0.0 0.0 1.2793445885710732 0.0 4 1.7276766894950348E-4 0.0 0.0 1.6819796410578909 0.0 5 1.7276766894950348E-4 0.0 0.0 2.7952081159340167 0.0 6 1.7276766894950348E-4 0.0 0.0 3.374152574583803 0.0 7 1.7276766894950348E-4 0.0 0.0 3.9368568723523354 0.0 8 1.7276766894950348E-4 0.0 0.0 4.817540064822429 0.0 9 1.7276766894950348E-4 0.0 0.0 5.13387766666897 0.0 10 1.7276766894950348E-4 0.0 0.0 5.962816942288688 0.0 11 1.7276766894950348E-4 0.0 0.0 7.091767275039218 0.0 12 1.7276766894950348E-4 0.0 0.0 8.036720040358528 0.0 13 1.7276766894950348E-4 0.0 0.0 8.403851336876222 0.0 14 1.7276766894950348E-4 0.0 0.0 8.549494481800654 0.0 15 1.7276766894950348E-4 0.0 0.0 8.85062852877964 0.0 16 1.7276766894950348E-4 0.0 0.0 9.449959572365465 0.0 17 1.7276766894950348E-4 0.0 0.0 10.163662812795865 0.0 18 1.7276766894950348E-4 0.0 0.0 10.923581404670255 0.0 19 1.7276766894950348E-4 0.0 0.0 11.377873990172976 0.0 20 1.7276766894950348E-4 0.0 0.0 11.84192794897134 0.0 21 1.7276766894950348E-4 0.0 0.0 12.422772851979571 0.0 22 1.7276766894950348E-4 0.0 0.0 13.043267935011714 0.0 23 1.7276766894950348E-4 0.0 0.0 13.67568398720137 0.0 24 1.7276766894950348E-4 0.0 0.0 14.154250430191496 0.0 25 1.7276766894950348E-4 0.0 0.0 14.582195946179416 0.0 26 1.7276766894950348E-4 0.0 0.0 14.995283442637678 0.0 27 1.7276766894950348E-4 0.0 0.0 15.381160031236394 0.0 28 1.7276766894950348E-4 0.0 0.0 15.782585710040566 0.0 29 1.7276766894950348E-4 0.0 0.0 16.19074932793377 0.0 30 1.7276766894950348E-4 0.0 0.0 16.658863326952446 0.0 31 1.7276766894950348E-4 0.0 0.0 17.10451752900769 0.0 32 1.7276766894950348E-4 0.0 0.0 17.55060365023531 0.0 33 1.7276766894950348E-4 0.0 0.0 17.978808317726653 0.0 34 1.7276766894950348E-4 0.0 0.0 18.382566360061645 0.0 35 1.7276766894950348E-4 0.0 0.0 18.839968763605455 0.0 36 2.591515034242552E-4 0.0 0.0 19.291065147232608 0.0 37 2.591515034242552E-4 0.0 0.0 19.71814682487578 0.0 38 2.591515034242552E-4 0.0 0.0 20.153866885966426 0.0 39 2.591515034242552E-4 0.0 0.0 20.581553250450924 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGCGTAT 20 7.033306E-4 45.000004 6 CTCGTCT 40 6.8157533E-9 45.000004 17 GTCGACG 20 7.033306E-4 45.000004 2 CGGTGAT 20 7.033306E-4 45.000004 45 CATACGT 20 7.033306E-4 45.000004 44 ATACGTC 20 7.033306E-4 45.000004 45 ATACGTA 20 7.033306E-4 45.000004 43 CGCCGTA 20 7.033306E-4 45.000004 20 GCGTATA 20 7.033306E-4 45.000004 7 TACGTAA 20 7.033306E-4 45.000004 44 TCGTAAG 55 1.8189894E-12 45.0 1 GTATACG 45 3.8562575E-10 45.0 1 TCGCGCA 35 1.211938E-7 45.0 34 CGAACTA 50 2.1827873E-11 44.999996 36 CGACACG 25 3.890824E-5 44.999996 33 CGTTAGT 25 3.890824E-5 44.999996 23 CCGAACT 55 6.184564E-11 40.909092 35 ATCGCAA 55 6.184564E-11 40.909092 39 CCCGAAC 55 6.184564E-11 40.909092 34 CGAGGGT 105 0.0 40.714287 4 >>END_MODULE