SRR2934851.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934851.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1364117
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACGGCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGC	11485	0.8419365787538753	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCG	10474	0.7678227014251711	No Hit
GAATCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTC	9165	0.671863190620746	No Hit
GCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTCTGC	6411	0.46997434970753976	No Hit
CCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTCTGC	5239	0.38405796570235545	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4118	0.30188026393630457	No Hit
CTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTCTGCT	3267	0.23949558578919553	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGTGGACAAT	2706	0.1983700811587276	No Hit
GAATGACTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCT	2109	0.15460550671240078	No Hit
TCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTCTGC	1886	0.13825793535305256	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGTGGACAATCGTA	1582	0.11597245690802183	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTC	1574	0.11538599694894207	No Hit
GAACTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTCT	1385	0.10153088041568283	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AACGTTA	30	2.1658016E-6	45.000004	33
CGCTATA	30	2.1658016E-6	45.000004	12
ATTACGC	20	7.0337515E-4	45.0	25
ATATGCG	20	7.0337515E-4	45.0	1
TGCGATC	20	7.0337515E-4	45.0	42
CTCGACG	20	7.0337515E-4	45.0	1
ACGTATC	20	7.0337515E-4	45.0	36
ATACGAG	20	7.0337515E-4	45.0	1
CGTCAAT	20	7.0337515E-4	45.0	14
ATCGATT	20	7.0337515E-4	45.0	14
CTACGCG	25	3.8911916E-5	44.999996	1
TATTACG	25	3.8911916E-5	44.999996	1
CCGAACG	25	3.8911916E-5	44.999996	37
CGTTTTT	2395	0.0	42.55741	1
TCGTGCG	50	1.0822987E-9	40.499996	1
TGCGTAG	90	0.0	40.0	1
TAATACG	40	3.458863E-7	39.375	1
GATACGA	40	3.458863E-7	39.375	11
GGATCGA	80	0.0	39.375	8
GCCCGAT	40	3.458863E-7	39.375	33