##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934849.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 721612 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.47117010249275 33.0 31.0 34.0 31.0 34.0 2 32.659150623880976 34.0 31.0 34.0 31.0 34.0 3 32.64332355892086 34.0 31.0 34.0 31.0 34.0 4 36.15530229541638 37.0 35.0 37.0 35.0 37.0 5 36.055170922878226 37.0 35.0 37.0 35.0 37.0 6 35.99527446882812 37.0 35.0 37.0 35.0 37.0 7 36.22936425669196 37.0 36.0 37.0 35.0 37.0 8 36.06922972456112 37.0 37.0 37.0 35.0 37.0 9 37.83821638221094 39.0 38.0 39.0 35.0 39.0 10 37.61522258499027 39.0 37.0 39.0 35.0 39.0 11 37.50429455164271 39.0 37.0 39.0 35.0 39.0 12 37.35722382665477 39.0 37.0 39.0 35.0 39.0 13 37.25970050387188 39.0 37.0 39.0 34.0 39.0 14 38.443839625726845 40.0 38.0 41.0 34.0 41.0 15 38.53282234774366 40.0 38.0 41.0 35.0 41.0 16 38.63033735580894 40.0 38.0 41.0 35.0 41.0 17 38.6359012876726 40.0 38.0 41.0 35.0 41.0 18 38.57958847691003 40.0 38.0 41.0 35.0 41.0 19 38.55424106029279 40.0 37.0 41.0 35.0 41.0 20 38.49308076916681 40.0 37.0 41.0 35.0 41.0 21 38.437311186621066 40.0 37.0 41.0 35.0 41.0 22 38.37137686180385 40.0 37.0 41.0 34.0 41.0 23 38.214185739704995 40.0 36.0 41.0 34.0 41.0 24 37.97251015781334 40.0 36.0 41.0 34.0 41.0 25 37.91971585838373 40.0 36.0 41.0 34.0 41.0 26 38.06712471522092 40.0 36.0 41.0 34.0 41.0 27 38.1712651674307 40.0 37.0 41.0 34.0 41.0 28 38.16709117919325 40.0 37.0 41.0 34.0 41.0 29 38.177125657555585 40.0 36.0 41.0 34.0 41.0 30 38.064680188245205 40.0 36.0 41.0 34.0 41.0 31 37.96286369960588 40.0 36.0 41.0 34.0 41.0 32 37.85865672965527 40.0 36.0 41.0 34.0 41.0 33 37.72905938371313 40.0 36.0 41.0 34.0 41.0 34 37.678662494526144 40.0 36.0 41.0 34.0 41.0 35 37.59583266353664 40.0 36.0 41.0 33.0 41.0 36 37.53148090663681 40.0 36.0 41.0 33.0 41.0 37 37.46762803279324 40.0 36.0 41.0 33.0 41.0 38 37.38806727160856 40.0 35.0 41.0 33.0 41.0 39 37.386287922041205 40.0 36.0 41.0 33.0 41.0 40 37.297217895489545 40.0 35.0 41.0 33.0 41.0 41 37.238833334257194 40.0 35.0 41.0 33.0 41.0 42 37.17565395253959 40.0 35.0 41.0 33.0 41.0 43 37.10632167979468 39.0 35.0 41.0 33.0 41.0 44 37.04114260849321 39.0 35.0 41.0 33.0 41.0 45 36.97626563859803 39.0 35.0 41.0 32.0 41.0 46 36.89568493872053 39.0 35.0 41.0 32.0 41.0 47 36.78442154509626 39.0 35.0 41.0 32.0 41.0 48 36.756439748784665 39.0 35.0 41.0 32.0 41.0 49 36.743662799399125 39.0 35.0 41.0 32.0 41.0 50 36.626494570489406 39.0 35.0 41.0 32.0 41.0 51 35.74506937246055 38.0 35.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 13.0 10 11.0 11 14.0 12 15.0 13 8.0 14 16.0 15 23.0 16 35.0 17 51.0 18 125.0 19 230.0 20 345.0 21 545.0 22 892.0 23 1451.0 24 2182.0 25 3307.0 26 4649.0 27 5344.0 28 5822.0 29 6234.0 30 6973.0 31 9100.0 32 12446.0 33 18534.0 34 40613.0 35 61703.0 36 48237.0 37 80398.0 38 157429.0 39 254658.0 40 205.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.41938326967956 21.993120956968564 25.705642367366394 12.881853405985488 2 33.05515983658808 24.352283498611442 24.687920932578727 17.90463573222175 3 31.022765696801052 23.95885877729306 27.796239530384746 17.22213599552114 4 28.546642794188564 24.640804199486706 27.58130408030909 19.231248926015642 5 24.140396778324085 29.434516055719694 26.49346186039035 19.931625305565873 6 25.098945139493246 33.32039932817082 26.2466533261642 15.334002206171737 7 79.40818611663886 5.343730425768973 10.199525506782038 5.048557950810131 8 79.98786051229747 3.9468578682172692 9.946342355725792 6.118939263759471 9 74.70940061972362 5.413574053646558 12.285133839237707 7.591891487392116 10 40.209420020731365 24.734206193910303 20.036806483262474 15.019567302095863 11 28.166244463783862 24.438617983071236 26.22545079627279 21.169686756872114 12 25.89923670892391 22.724538948908833 31.467741667267173 19.908482674900085 13 21.99145801344767 26.05001025481838 32.67379145579619 19.28474027593776 14 18.188721917041292 29.075043097952918 30.902202291536174 21.83403269346962 15 15.972711096822115 26.248454848311837 37.11329634207857 20.665537712787483 16 18.709916132215096 25.688874353530704 33.87623820002993 21.724971314224266 17 19.09585760768945 24.38872967744439 29.574757625981828 26.94065508888433 18 20.198666319296244 25.107814171604687 32.80696551609452 21.88655399300455 19 21.243272007671713 26.379688807835787 29.633099227839892 22.743939956652607 20 22.589840523716344 26.748862269474454 29.65208449970344 21.009212707105757 21 21.35787653198672 26.852796239530385 31.23950266902435 20.549824559458546 22 20.346529714029145 24.947617279091812 28.65611990931415 26.049733097564896 23 19.537369112487042 26.004695043873994 29.856626552773513 24.60130929086545 24 21.010321336119688 24.017477536404606 31.348286891016226 23.62391423645948 25 18.77851255245201 26.588388219708097 29.1821643764239 25.450934851415997 26 17.986812857879304 28.27641447204315 30.409832430724542 23.326940239353004 27 20.015881110624544 26.512031396373676 29.437841942761484 24.034245550240296 28 16.713136699500563 25.336746062981213 32.61725137608577 25.332865861432456 29 19.575616813467626 23.550606142913367 32.553366629158056 24.32041041446096 30 20.606087481915488 24.717161022821127 29.176898388607732 25.499853106655657 31 21.128251747476483 25.032427398657454 27.942439981596756 25.896880872269307 32 21.901659063319347 25.35074250428208 28.808417820102772 23.939180612295804 33 20.87770159032832 24.03479986474726 28.495091545040825 26.592406999883593 34 18.671807009861254 22.179647788562274 32.54810064134189 26.60044456023459 35 18.788905949457604 22.623237972760986 32.472436711141164 26.115419366640246 36 20.50478650576764 22.26972389594408 32.05406783700936 25.171421761278918 37 19.83739183938183 24.346878932168533 32.105480507530366 23.710248720919274 38 19.720708635665705 24.711340720497997 29.650005820302322 25.91794482353398 39 21.256159819958647 23.477990942500956 30.59275621802298 24.673093019517413 40 21.008104078091826 21.671341385675404 33.719782930439074 23.600771605793692 41 17.906160097115905 23.49406606320294 32.484493051667656 26.1152807880135 42 20.301630238964986 22.099965078186063 32.46051894924142 25.137885733607533 43 21.381712055786213 23.004190617672656 30.24284518550135 25.371252141039786 44 20.33031601470042 23.281763607035362 28.49717022444194 27.890750153822275 45 20.643780868389104 22.72232169088097 28.214469825889815 28.41942761484011 46 22.125047809626224 22.40927257307251 30.707222163711243 24.75845745359002 47 18.542928886991902 23.251137730525546 33.91420874375704 24.29172463872552 48 18.98194597650815 21.39834149099516 33.293237917329535 26.326474615167157 49 20.004656241858505 19.23845501460619 34.52617195944635 26.23071678408896 50 20.046922723014585 20.326435813151665 32.64441278692705 26.982228676906704 51 18.66266082049633 20.48108956059489 30.457087742443306 30.39916187646547 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 292.0 1 450.5 2 609.0 3 3043.5 4 5478.0 5 3629.5 6 1781.0 7 1735.0 8 1689.0 9 1805.5 10 1922.0 11 1926.0 12 1930.0 13 2007.5 14 2085.0 15 2075.0 16 2065.0 17 1964.0 18 1863.0 19 1861.0 20 1859.0 21 2101.0 22 2343.0 23 2717.5 24 3092.0 25 3234.5 26 4566.5 27 5756.0 28 6712.5 29 7669.0 30 8539.5 31 9410.0 32 11102.0 33 12794.0 34 15331.5 35 17869.0 36 19538.0 37 21207.0 38 22521.5 39 23836.0 40 27759.5 41 31683.0 42 37121.0 43 42559.0 44 46496.5 45 50434.0 46 59757.5 47 69081.0 48 79547.5 49 90014.0 50 86652.0 51 83290.0 52 69764.5 53 56239.0 54 49256.5 55 42274.0 56 36372.0 57 30470.0 58 28119.0 59 25768.0 60 23424.5 61 21081.0 62 19426.5 63 17772.0 64 14311.5 65 10851.0 66 9091.0 67 7331.0 68 6255.0 69 5179.0 70 4338.0 71 3497.0 72 2958.0 73 2419.0 74 1868.5 75 1027.0 76 736.0 77 535.5 78 335.0 79 266.0 80 197.0 81 149.5 82 102.0 83 59.0 84 16.0 85 23.5 86 31.0 87 17.5 88 4.0 89 2.5 90 1.0 91 2.0 92 3.0 93 1.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 721612.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.614315549997265 #Duplication Level Percentage of deduplicated Percentage of total 1 66.41999061673606 15.68462617251463 2 13.281332655224132 6.272591604898913 3 5.843757883769336 4.1398902799534 4 3.2307180036348115 3.0516477756355864 5 1.9760952559581484 2.3332068465524167 6 1.3108877355637476 1.8573429982934226 7 0.9258837190134779 1.530487721237249 8 0.6256122647043754 1.1818724344542029 9 0.5115722987798518 1.0872386721022413 >10 3.826235880179481 20.672502456676337 >50 1.7270916990052398 29.404528022502202 >100 0.31191026555822166 9.699093157463624 >500 0.005347033123855228 0.8762897004544544 >1k 0.0035646887492368187 2.2086821572613635 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCTCCGCTTTTCGTATGCCGTCTTCTGC 3824 0.5299246686585035 TruSeq Adapter, Index 20 (95% over 22bp) CCTGTCTCTTATACACATCTGACGCTCCGCTTTTCGTATGCCGTCTTCTGC 3688 0.5110779754216948 TruSeq Adapter, Index 20 (95% over 22bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3320 0.46008104078091827 No Hit CTGTCTCTTATACACATCTGACGCTCCGCTTTTCGTATGCCGTCTTCTGCT 2333 0.32330393618731396 TruSeq Adapter, Index 23 (95% over 23bp) TCTGTCTCTTATACACATCTGACGCTCCGCTTTTCGTATGCCGTCTTCTGC 1513 0.20966946225949679 TruSeq Adapter, Index 20 (95% over 22bp) ACTGTCTCTTATACACATCTGACGCTCCGCTTTTCGTATGCCGTCTTCTGC 1065 0.14758623747942107 TruSeq Adapter, Index 23 (95% over 22bp) CGCTGTCTCTTATACACATCTGACGCTCCGCTTTTCGTATGCCGTCTTCTG 941 0.13040248776350727 TruSeq Adapter, Index 23 (95% over 21bp) ACCTGTCTCTTATACACATCTGACGCTCCGCTTTTCGTATGCCGTCTTCTG 888 0.12305782054622151 TruSeq Adapter, Index 23 (95% over 21bp) GCCTGTCTCTTATACACATCTGACGCTCCGCTTTTCGTATGCCGTCTTCTG 792 0.10975427237906243 TruSeq Adapter, Index 20 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.3350831194603194 0.0 2 0.0 0.0 0.0 1.7988891537280423 0.0 3 0.0 0.0 0.0 2.5984878300249994 0.0 4 0.0 0.0 0.0 3.479432160219065 0.0 5 0.0 0.0 0.0 5.794110962678004 0.0 6 0.0 0.0 0.0 6.988658725187497 0.0 7 0.0 0.0 0.0 8.227135912373964 0.0 8 0.0 0.0 0.0 9.912252013547446 0.0 9 0.0 0.0 0.0 10.537657356030664 0.0 10 0.0 0.0 0.0 11.99841466051008 0.0 11 0.0 0.0 0.0 14.376008159509542 0.0 12 0.0 0.0 0.0 16.096046074621817 0.0 13 0.0 0.0 0.0 16.73281486449782 0.0 14 0.0 0.0 0.0 16.971447259746235 0.0 15 0.0 0.0 0.0 17.441921697532745 0.0 16 0.0 0.0 0.0 18.436223344401146 0.0 17 0.0 0.0 0.0 19.659734039899558 0.0 18 0.0 0.0 0.0 20.949485318980283 0.0 19 0.0 0.0 0.0 21.715963703486082 0.0 20 0.0 0.0 0.0 22.44267002211715 0.0 21 0.0 0.0 0.0 23.356318908222146 0.0 22 0.0 0.0 0.0 24.30281092886482 0.0 23 0.0 0.0 0.0 25.23350498605899 0.0 24 0.0 0.0 0.0 25.986125507890666 0.0 25 0.0 0.0 0.0 26.604324761783342 0.0 26 0.0 0.0 0.0 27.174298653570062 0.0 27 0.0 0.0 0.0 27.696047183250833 0.0 28 0.0 0.0 0.0 28.273781478135064 0.0 29 0.0 0.0 0.0 28.870501044882847 0.0 30 0.0 0.0 0.0 29.506992677505362 0.0 31 0.0 0.0 0.0 30.116045742033116 0.0 32 0.0 0.0 0.0 30.67507192230728 0.0 33 1.3857862674124044E-4 0.0 0.0 31.21247983680981 0.0 34 1.3857862674124044E-4 0.0 0.0 31.753352216980872 0.0 35 1.3857862674124044E-4 0.0 0.0 32.328453517957016 0.0 36 1.3857862674124044E-4 0.0 0.0 32.83232540478817 0.0 37 1.3857862674124044E-4 0.0 0.0 33.35989423679207 0.0 38 1.3857862674124044E-4 0.0 0.0 33.87194226260095 0.0 39 1.3857862674124044E-4 0.0 0.0 34.40741007632911 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGATCGG 25 3.889358E-5 45.0 2 TCGCCCG 20 7.03154E-4 45.0 29 AACGTTA 20 7.03154E-4 45.0 24 CGGAATC 35 1.2110831E-7 45.0 27 CTAGACG 25 3.889358E-5 45.0 1 TAATACG 25 3.889358E-5 45.0 1 GATACGT 20 7.03154E-4 45.0 18 AATCCCG 20 7.03154E-4 45.0 16 GGTACGA 20 7.03154E-4 45.0 9 CGAACAA 25 3.889358E-5 45.0 25 ATTAGGC 20 7.03154E-4 45.0 20 CTCAACG 25 3.889358E-5 45.0 43 CGTTGTC 20 7.03154E-4 45.0 23 CCGGATC 20 7.03154E-4 45.0 43 GTTAGCG 70 0.0 45.0 1 TACGGTA 20 7.03154E-4 45.0 1 AAGCGGT 25 3.889358E-5 45.0 12 TCGATTT 20 7.03154E-4 45.0 42 CCGCTCG 35 1.2110831E-7 45.0 19 TAGCCGA 20 7.03154E-4 45.0 31 >>END_MODULE