##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934847.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2029307 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.35751465894515 33.0 31.0 34.0 31.0 34.0 2 32.53688722307665 34.0 31.0 34.0 31.0 34.0 3 32.54010950536316 34.0 31.0 34.0 31.0 34.0 4 36.04249135295941 37.0 35.0 37.0 35.0 37.0 5 35.93942365546465 37.0 35.0 37.0 35.0 37.0 6 35.8741575325961 37.0 35.0 37.0 35.0 37.0 7 36.1252664086804 37.0 35.0 37.0 35.0 37.0 8 35.93979077586585 37.0 35.0 37.0 35.0 37.0 9 37.62808830797903 39.0 38.0 39.0 35.0 39.0 10 37.378531685940075 39.0 37.0 39.0 34.0 39.0 11 37.28879711152625 39.0 37.0 39.0 34.0 39.0 12 37.189348876241986 39.0 37.0 39.0 34.0 39.0 13 37.17839636880965 39.0 37.0 39.0 34.0 39.0 14 38.4046159600297 40.0 38.0 41.0 34.0 41.0 15 38.45850135046102 40.0 38.0 41.0 34.0 41.0 16 38.53422424502552 40.0 38.0 41.0 34.0 41.0 17 38.49765264693809 40.0 38.0 41.0 34.0 41.0 18 38.480170324155 40.0 38.0 41.0 34.0 41.0 19 38.45999151434455 40.0 38.0 41.0 34.0 41.0 20 38.41885185435225 40.0 37.0 41.0 34.0 41.0 21 38.35423767818275 40.0 37.0 41.0 34.0 41.0 22 38.30075685936135 40.0 37.0 41.0 34.0 41.0 23 38.133369667576176 40.0 37.0 41.0 34.0 41.0 24 37.88936321611269 40.0 36.0 41.0 33.0 41.0 25 37.826306221779156 40.0 36.0 41.0 33.0 41.0 26 37.9667763428599 40.0 37.0 41.0 34.0 41.0 27 38.0225313370525 40.0 37.0 41.0 34.0 41.0 28 37.971015228351355 40.0 37.0 41.0 34.0 41.0 29 37.98324501911244 40.0 37.0 41.0 34.0 41.0 30 37.883214811755934 40.0 37.0 41.0 33.0 41.0 31 37.83662550811681 40.0 36.0 41.0 33.0 41.0 32 37.764310180766145 40.0 36.0 41.0 33.0 41.0 33 37.6776776505477 40.0 36.0 41.0 33.0 41.0 34 37.62042855023907 40.0 36.0 41.0 33.0 41.0 35 37.55727398565126 40.0 36.0 41.0 33.0 41.0 36 37.50097841282763 40.0 36.0 41.0 33.0 41.0 37 37.45499966244634 40.0 36.0 41.0 33.0 41.0 38 37.38931467737508 40.0 36.0 41.0 33.0 41.0 39 37.37814879660889 40.0 36.0 41.0 33.0 41.0 40 37.293237543654065 40.0 35.0 41.0 33.0 41.0 41 37.20983665852432 40.0 35.0 41.0 32.0 41.0 42 37.10823005094843 40.0 35.0 41.0 32.0 41.0 43 37.055528808603135 39.0 35.0 41.0 32.0 41.0 44 37.011060426046924 39.0 35.0 41.0 32.0 41.0 45 36.96697444004283 39.0 35.0 41.0 32.0 41.0 46 36.907612795895346 39.0 35.0 41.0 32.0 41.0 47 36.805557266593965 39.0 35.0 41.0 31.0 41.0 48 36.74782622836269 39.0 35.0 41.0 31.0 41.0 49 36.69633475861464 39.0 35.0 41.0 31.0 41.0 50 36.60587087118903 39.0 35.0 41.0 31.0 41.0 51 35.6977234100114 38.0 34.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 13.0 9 30.0 10 44.0 11 36.0 12 39.0 13 45.0 14 61.0 15 84.0 16 145.0 17 267.0 18 443.0 19 793.0 20 1371.0 21 2171.0 22 3459.0 23 4878.0 24 6876.0 25 9484.0 26 12648.0 27 15333.0 28 17611.0 29 20718.0 30 25806.0 31 32394.0 32 42552.0 33 60186.0 34 113140.0 35 148398.0 36 139112.0 37 217929.0 38 411740.0 39 740865.0 40 633.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.790916800661506 21.478021807444613 25.266655069932742 11.464406321961143 2 32.030343363522626 24.61628526388565 25.542069287692794 17.811302084898934 3 31.68416607245725 24.634320977555394 26.080331857131522 17.601181092855835 4 28.52382611403794 25.859468281536508 26.751694051220444 18.865011553205107 5 25.753915006452942 30.0641549060837 24.562917291469454 19.619012795993903 6 26.658213863156238 34.90053501022763 23.47633945972689 14.964911666889238 7 82.32056559209622 5.449101589853088 7.665473977076903 4.564858840973791 8 83.98374420430225 4.781139571292072 6.779703613105361 4.455412611300311 9 78.56056279311115 6.451217090366317 8.718542832602461 6.269677283920077 10 40.16445022857557 27.27679941970338 17.23484913815406 15.323901213566996 11 29.76134217247563 26.85414281821331 24.551583373043112 18.832931636267947 12 27.706108538530643 23.290955976596937 28.94909444455669 20.053841040315735 13 24.78644187399935 23.678428153059148 29.98156513529003 21.55356483765147 14 20.685928743162073 26.885582122369854 29.252597068851582 23.175892065616488 15 19.79882787572309 26.89484636873573 32.52445292900482 20.78187282653635 16 22.678480880418782 25.605046451818282 30.573885567831777 21.14258709993116 17 22.598059337497972 26.031990231147873 28.20233705397951 23.16761337737464 18 23.12094720020184 26.337759639128038 28.50790935033487 22.033383810335252 19 23.76826177606444 28.008871994232514 26.788898870402555 21.43396735930049 20 26.16533624532907 26.40453120203104 27.599175482073434 19.830957070566456 21 25.342543045483012 27.205543567336044 27.193519758222877 20.258393628958064 22 23.41725525019132 24.85617011127444 27.607109224971875 24.119465413562363 23 23.16450886928395 26.202294674980177 28.275761134219714 22.357435321516164 24 23.365316337054963 24.843801356817867 29.055485444045676 22.73539686208149 25 22.00928691420273 27.009762445997577 26.704978596141444 24.275972043658253 26 21.626988917891673 27.923818328128764 27.427737646398498 23.02145510758106 27 22.22251241433652 27.278031367358412 28.210467908502757 22.288988309802313 28 20.285397921556473 27.42803331383571 29.144777010082752 23.14179175452507 29 21.516852797531374 25.42094419424956 28.642142366827688 24.420060641391373 30 22.35304958786423 25.684038935459245 29.069677481031704 22.893233995644817 31 21.946063360546237 26.555518706632363 27.4844565164364 24.013961416385 32 22.571005766993363 26.601347159399737 27.247134120170085 23.580512953436813 33 22.798620415737982 26.02213464990758 28.195536702923707 22.98370823143073 34 21.01214848221585 25.34071976295356 28.933966127352832 24.713165627477753 35 21.342310453765744 24.748152940880804 29.01882268183178 24.890713923521677 36 21.489207892152347 26.711138334416628 28.759620895212013 23.04003287821902 37 21.76861362031472 26.246595512655308 29.42566107543117 22.559129791598806 38 21.45057401369039 25.84143256786676 28.695658172962496 24.012335245480354 39 22.981835670995075 24.80245719351483 28.20603289694462 24.009674238545472 40 22.31929422211622 24.21284704581416 30.266637822665572 23.201220909404046 41 20.323982522112228 25.534135544794356 29.574923853315443 24.566958079777972 42 22.00761146539188 24.894064821143374 29.04149051868446 24.056833194780285 43 22.398927318537805 24.87464932609999 28.85901443202039 23.86740892334181 44 21.242916916957366 25.09590712494462 28.392056992855196 25.269118965242814 45 21.78571305376663 24.00923073738966 28.10949747869593 26.09555873014778 46 21.69164153082801 25.36698488695895 28.09954334164323 24.84183024056981 47 20.506064385526685 25.204663463931283 30.629224656496035 23.660047494045997 48 21.327576359811502 23.31416587041783 30.444678897771503 24.91357887199916 49 21.10868390046454 23.78339009326829 30.490852295882288 24.617073710384876 50 20.015650663009588 23.464463484332338 30.49711058996988 26.022775262688196 51 19.803903500061843 23.613874095935213 28.92342065542572 27.658801748577222 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 394.0 1 1065.0 2 1736.0 3 4601.5 4 7467.0 5 5248.5 6 3030.0 7 3029.5 8 3029.0 9 2995.5 10 2962.0 11 3020.5 12 3079.0 13 3066.0 14 3053.0 15 3232.0 16 3411.0 17 3539.5 18 3668.0 19 4013.0 20 4358.0 21 4842.0 22 5326.0 23 6976.0 24 8626.0 25 9961.0 26 15333.0 27 19370.0 28 22293.0 29 25216.0 30 30262.0 31 35308.0 32 40054.5 33 44801.0 34 49818.5 35 54836.0 36 61830.0 37 68824.0 38 75419.0 39 82014.0 40 89104.5 41 96195.0 42 105641.5 43 115088.0 44 124838.0 45 134588.0 46 152262.5 47 169937.0 48 179645.0 49 189353.0 50 186544.0 51 183735.0 52 163199.5 53 142664.0 54 127772.0 55 112880.0 56 106342.0 57 99804.0 58 96486.0 59 93168.0 60 90583.5 61 87999.0 62 81340.5 63 74682.0 64 62887.5 65 51093.0 66 41583.0 67 32073.0 68 26872.5 69 21672.0 70 17442.5 71 13213.0 72 11139.0 73 9065.0 74 6854.5 75 3707.0 76 2770.0 77 2295.0 78 1820.0 79 1266.0 80 712.0 81 443.5 82 175.0 83 122.0 84 69.0 85 58.5 86 48.0 87 32.0 88 16.0 89 17.5 90 19.0 91 13.0 92 7.0 93 8.0 94 9.0 95 6.5 96 4.0 97 2.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2029307.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.919348820404732 #Duplication Level Percentage of deduplicated Percentage of total 1 71.09733117408236 15.584072022045467 2 11.468644647958207 5.027704450717276 3 4.336675923273797 2.8517133684986735 4 2.1360348378973293 1.8728197081763296 5 1.2693740219102987 1.391192598490596 6 0.8385562796929431 1.1028364560078296 7 0.6029580435628555 0.9251513376646117 8 0.429697384810105 0.7534949491894699 9 0.35250803378068596 0.6954071898990484 >10 5.087362318567814 28.381044694736325 >50 2.154323765065903 33.02493544635041 >100 0.2207956394885838 6.590086477968514 >500 0.0029837235527623443 0.4310447263234315 >1k 0.00275420635639601 1.368496573932071 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCCTTCTCTGTCGTATGCCGTCTTCTGC 4933 0.2430879112918844 TruSeq Adapter, Index 16 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3673 0.18099774947802377 No Hit CCTGTCTCTTATACACATCTGACGCCTTCTCTGTCGTATGCCGTCTTCTGC 3180 0.1567037417206958 TruSeq Adapter, Index 16 (95% over 21bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCCTTCTCTGTCGTATGC 2286 0.11264929357657566 No Hit CTGTCTCTTATACACATCTGACGCCTTCTCTGTCGTATGCCGTCTTCTGCT 2259 0.11131879010913578 TruSeq Adapter, Index 13 (95% over 22bp) GAATCTGTCTCTTATACACATCTGACGCCTTCTCTGTCGTATGCCGTCTTC 2154 0.10614460995798072 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.942232496118133E-4 0.0 0.0 0.11772491791532774 0.0 2 3.942232496118133E-4 0.0 0.0 0.6960011471896563 0.0 3 3.942232496118133E-4 0.0 0.0 1.0242412803976924 0.0 4 4.4350115581328996E-4 0.0 0.0 1.4112699557040902 0.0 5 4.4350115581328996E-4 0.0 0.0 2.5225852963597917 0.0 6 4.4350115581328996E-4 0.0 0.0 3.158221008452639 0.0 7 4.4350115581328996E-4 0.0 0.0 3.750048661932374 0.0 8 4.4350115581328996E-4 0.0 0.0 4.672038286962002 0.0 9 4.4350115581328996E-4 0.0 0.0 4.984213822748357 0.0 10 4.4350115581328996E-4 0.0 0.0 5.828787857135466 0.0 11 4.4350115581328996E-4 0.0 0.0 6.978638520440722 0.0 12 4.4350115581328996E-4 0.0 0.0 7.921029198637761 0.0 13 4.4350115581328996E-4 0.0 0.0 8.25838574449307 0.0 14 4.4350115581328996E-4 0.0 0.0 8.396363881857205 0.0 15 4.4350115581328996E-4 0.0 0.0 8.678430616954458 0.0 16 4.4350115581328996E-4 0.0 0.0 9.26986404718458 0.0 17 4.4350115581328996E-4 0.0 0.0 9.944429305176595 0.0 18 4.4350115581328996E-4 0.0 0.0 10.655115268414292 0.0 19 4.4350115581328996E-4 0.0 0.0 11.131879010913577 0.0 20 4.4350115581328996E-4 0.0 0.0 11.564292637831535 0.0 21 4.4350115581328996E-4 0.0 0.0 12.140597750857806 0.0 22 4.4350115581328996E-4 0.0 0.0 12.766427159616558 0.0 23 4.4350115581328996E-4 0.0 0.0 13.367075558306357 0.0 24 4.927790620147666E-4 0.0 0.0 13.847436587958352 0.0 25 4.927790620147666E-4 0.0 0.0 14.280934328812743 0.0 26 4.927790620147666E-4 0.0 0.0 14.669835564554797 0.0 27 4.927790620147666E-4 0.0 0.0 15.044249095873615 0.0 28 4.927790620147666E-4 0.0 0.0 15.440985518701705 0.0 29 4.927790620147666E-4 0.0 0.0 15.859699887695651 0.0 30 4.927790620147666E-4 0.0 0.0 16.315964021215123 0.0 31 5.9133487441772E-4 0.0 0.0 16.737487230862556 0.0 32 5.9133487441772E-4 0.0 0.0 17.174089479807638 0.0 33 5.9133487441772E-4 0.0 0.0 17.580730761782224 0.0 34 5.9133487441772E-4 0.0 0.0 17.991117164628122 0.0 35 5.9133487441772E-4 0.0 0.0 18.414069433555397 0.0 36 5.9133487441772E-4 0.0 0.0 18.842245160540028 0.0 37 5.9133487441772E-4 0.0 0.0 19.261649420220795 0.0 38 6.406127806191966E-4 0.0 0.0 19.695097883168984 0.0 39 6.406127806191966E-4 0.0 0.0 20.113664418444326 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTACGA 20 7.0345646E-4 45.0 21 CGTAAAC 20 7.0345646E-4 45.0 44 TCGCGGA 20 7.0345646E-4 45.0 24 TCGATAG 130 0.0 39.807693 1 TATCGTG 30 1.1402301E-4 37.499996 1 CGTTTTT 2665 0.0 37.317074 1 CGTAGCG 55 2.752131E-9 36.81818 2 TACGAAT 215 0.0 36.627907 12 TTATGCG 100 0.0 36.0 1 TGCGATA 25 0.002107488 36.0 1 TCGTAAT 25 0.002107488 36.0 43 CGTAACG 25 0.002107488 36.0 33 GCGTTAG 215 0.0 35.581394 1 GCGATGT 405 0.0 35.555557 9 TTGGACG 160 0.0 35.15625 1 CGAGATA 295 0.0 35.084747 19 TCCGATC 45 8.704301E-7 35.0 14 GATTACG 90 0.0 35.0 1 TATAACG 45 8.704301E-7 35.0 1 CGAATAT 220 0.0 34.772728 14 >>END_MODULE