SRR2934844.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934844.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1187439
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCTGTCTCTTATACACATCTGACGCAGTACGAGTCGTATGCCGTCTTCTGC	4552	0.38334600766860444	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4001	0.336943624051425	No Hit
CCTGTCTCTTATACACATCTGACGCAGTACGAGTCGTATGCCGTCTTCTGC	3540	0.29812057714122575	No Hit
CTGTCTCTTATACACATCTGACGCAGTACGAGTCGTATGCCGTCTTCTGCT	2752	0.2317592735289981	No Hit
TCTGTCTCTTATACACATCTGACGCAGTACGAGTCGTATGCCGTCTTCTGC	1776	0.1495655776844116	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCGCAAA	35	1.2119744E-7	45.000004	31
TAACGCG	30	2.1655633E-6	45.000004	1
ATCGCAA	35	1.2119744E-7	45.000004	30
CTTACCG	35	1.2119744E-7	45.000004	1
CGACGTC	20	7.0333807E-4	45.0	27
ATCCGAT	20	7.0333807E-4	45.0	32
CCCGTAA	20	7.0333807E-4	45.0	17
CGGATAT	20	7.0333807E-4	45.0	34
AATTCGC	20	7.0333807E-4	45.0	13
CCGACGT	20	7.0333807E-4	45.0	25
ACGTCAC	110	0.0	45.0	20
GCGGATA	20	7.0333807E-4	45.0	33
TCGCGTG	20	7.0333807E-4	45.0	45
TCGAACG	20	7.0333807E-4	45.0	1
CTATCGC	25	3.8908853E-5	44.999996	12
GTAATAC	25	3.8908853E-5	44.999996	23
CCGTACA	25	3.8908853E-5	44.999996	41
GAACGAT	25	3.8908853E-5	44.999996	27
ACGTCGT	25	3.8908853E-5	44.999996	42
ACCGTAC	25	3.8908853E-5	44.999996	40