SRR2934843.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934843.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	535823
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCTGTCTCTTATACACATCTGACGCCGAGAACTTCGTATGCCGTCTTCTGC	3248	0.6061703211694908	No Hit
CCTGTCTCTTATACACATCTGACGCCGAGAACTTCGTATGCCGTCTTCTGC	2283	0.4260735354772005	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2079	0.3880012616106438	No Hit
CTGTCTCTTATACACATCTGACGCCGAGAACTTCGTATGCCGTCTTCTGCT	1937	0.3614999729388249	No Hit
TCTGTCTCTTATACACATCTGACGCCGAGAACTTCGTATGCCGTCTTCTGC	1253	0.23384587820978195	No Hit
ACTGTCTCTTATACACATCTGACGCCGAGAACTTCGTATGCCGTCTTCTGC	950	0.17729735379033748	No Hit
CGCTGTCTCTTATACACATCTGACGCCGAGAACTTCGTATGCCGTCTTCTG	661	0.1233616324793822	No Hit
AGCTGTCTCTTATACACATCTGACGCCGAGAACTTCGTATGCCGTCTTCTG	560	0.10451212433956736	No Hit
ACCTGTCTCTTATACACATCTGACGCCGAGAACTTCGTATGCCGTCTTCTG	546	0.10189932123107817	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCCCATA	35	1.210301E-7	45.000004	25
CAACGTT	35	1.210301E-7	45.000004	18
TCATTCG	30	2.163324E-6	45.000004	15
GCTATCC	35	1.210301E-7	45.000004	19
CGACCGG	30	2.163324E-6	45.000004	3
CCTACGG	30	2.163324E-6	45.000004	2
GTAATGC	35	1.210301E-7	45.000004	28
TCGGAGC	30	2.163324E-6	45.000004	15
TCGTGAC	30	2.163324E-6	45.000004	29
CGAGAGG	35	1.210301E-7	45.000004	2
TCGAGCG	35	1.210301E-7	45.000004	1
TCGACCG	30	2.163324E-6	45.000004	2
GCGAGAC	25	3.888009E-5	45.0	21
CTAGATG	45	3.8380676E-10	45.0	1
CGGGTAT	100	0.0	45.0	6
TTGGCGT	20	7.0299115E-4	45.0	45
GTCGCGC	20	7.0299115E-4	45.0	36
GGTACGC	20	7.0299115E-4	45.0	8
ACACGTC	20	7.0299115E-4	45.0	40
TACCCCG	20	7.0299115E-4	45.0	25