##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934838.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1242531 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.31130088504834 33.0 31.0 34.0 30.0 34.0 2 32.48824938774163 34.0 31.0 34.0 31.0 34.0 3 32.488771708713905 34.0 31.0 34.0 31.0 34.0 4 36.013691408906496 37.0 35.0 37.0 35.0 37.0 5 35.904292126313145 37.0 35.0 37.0 35.0 37.0 6 35.83256111919944 37.0 35.0 37.0 35.0 37.0 7 36.07225493770377 37.0 35.0 37.0 35.0 37.0 8 35.80149147184255 37.0 35.0 37.0 35.0 37.0 9 37.50530006897212 39.0 38.0 39.0 35.0 39.0 10 37.3592868105504 39.0 37.0 39.0 34.0 39.0 11 37.27154171606181 39.0 37.0 39.0 34.0 39.0 12 37.143674483775456 39.0 37.0 39.0 34.0 39.0 13 37.056111276096935 39.0 37.0 39.0 33.0 39.0 14 38.24316978811796 40.0 37.0 41.0 33.0 41.0 15 38.302285415816584 40.0 37.0 41.0 34.0 41.0 16 38.431385615328715 40.0 38.0 41.0 34.0 41.0 17 38.383949374301324 40.0 37.0 41.0 34.0 41.0 18 38.35093852789186 40.0 37.0 41.0 34.0 41.0 19 38.32428647655471 40.0 37.0 41.0 34.0 41.0 20 38.22036391848574 40.0 37.0 41.0 34.0 41.0 21 38.189083411198595 40.0 37.0 41.0 34.0 41.0 22 38.11095578299455 40.0 37.0 41.0 34.0 41.0 23 37.92833981606898 40.0 36.0 41.0 33.0 41.0 24 37.68913210213669 40.0 36.0 41.0 33.0 41.0 25 37.62406088862169 40.0 36.0 41.0 33.0 41.0 26 37.715872682452186 40.0 36.0 41.0 33.0 41.0 27 37.760275598757694 40.0 36.0 41.0 33.0 41.0 28 37.70316394520539 40.0 36.0 41.0 33.0 41.0 29 37.68321595195613 40.0 36.0 41.0 33.0 41.0 30 37.604281100431294 40.0 36.0 41.0 33.0 41.0 31 37.51718468191136 40.0 36.0 41.0 33.0 41.0 32 37.38870096601212 40.0 35.0 41.0 33.0 41.0 33 37.28898031517926 40.0 35.0 41.0 33.0 41.0 34 37.18735226726738 40.0 35.0 41.0 32.0 41.0 35 37.09574409008709 40.0 35.0 41.0 32.0 41.0 36 37.01824340801155 39.0 35.0 41.0 32.0 41.0 37 36.960928137809034 39.0 35.0 41.0 32.0 41.0 38 36.88486806365395 39.0 35.0 41.0 31.0 41.0 39 36.926397812207505 39.0 35.0 41.0 32.0 41.0 40 36.836646329145914 39.0 35.0 41.0 31.0 41.0 41 36.73923467503024 39.0 35.0 41.0 31.0 41.0 42 36.633375746762056 39.0 35.0 41.0 31.0 41.0 43 36.60432697453826 39.0 35.0 41.0 31.0 41.0 44 36.58700748713714 39.0 35.0 41.0 31.0 41.0 45 36.54253938131121 39.0 35.0 41.0 31.0 41.0 46 36.465251168783716 39.0 35.0 41.0 31.0 41.0 47 36.3345663005591 39.0 35.0 41.0 31.0 41.0 48 36.30300250054123 38.0 35.0 40.0 31.0 41.0 49 36.28980041544235 38.0 35.0 40.0 31.0 41.0 50 36.1662461540195 38.0 35.0 40.0 31.0 41.0 51 35.272618550362125 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 8.0 9 18.0 10 17.0 11 23.0 12 18.0 13 15.0 14 31.0 15 40.0 16 92.0 17 146.0 18 301.0 19 545.0 20 1028.0 21 1744.0 22 2754.0 23 3925.0 24 5346.0 25 7106.0 26 9266.0 27 11036.0 28 12030.0 29 14455.0 30 17005.0 31 21449.0 32 28448.0 33 39834.0 34 75016.0 35 101767.0 36 93443.0 37 141900.0 38 254917.0 39 398490.0 40 318.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.13724888956493 20.483995972736295 23.615668341473974 11.763086796224803 2 31.392375723422596 26.170534175807287 23.48351872106209 18.95357137970803 3 31.311975314901602 25.875813158786382 26.431614181054634 16.38059734525738 4 28.506733433612517 25.560649995855233 27.829486749223964 18.10312982130828 5 27.440200687145833 28.72483664391472 23.774215693612476 20.060746975326975 6 26.15387463169933 35.4322749291567 23.156444386498205 15.25740605264577 7 78.15499170644435 6.4656736934531205 10.563438658673304 4.815895941429228 8 78.20167062230237 7.690029464053613 8.729359669899583 5.378940243744422 9 72.75528739323204 6.943408252993286 10.640780793396704 9.660523560377971 10 42.64891580169831 23.30283912433573 18.808947221437535 15.239297852528427 11 32.181329882312795 24.600271542520872 23.295837286957024 19.92256128820931 12 28.462227501768567 21.129372224918335 28.71702999764191 21.69137027567119 13 25.564754521215168 22.75822494569552 30.9291277239763 20.74789280911301 14 20.51989044941333 27.4468806009669 28.63405420065978 23.399174748959986 15 18.865686248471867 24.69725101426041 34.734183694410845 21.70287904285688 16 21.018147635753152 23.949744513416565 31.701824743205602 23.33028310762468 17 22.37891851390428 24.470133944344248 29.18623358290457 23.964713958846904 18 22.596377877091196 24.47488231681946 29.113237416209337 23.81550238988001 19 23.950951726757722 26.53736606973991 26.49607937347237 23.015602830029998 20 26.27540077470904 25.362103641679766 28.44331449275712 19.91918109085407 21 25.60032707433456 25.76829069053408 28.26030095023786 20.371081284893496 22 22.278397883030685 24.196418439459457 27.5760524284706 25.949131249039258 23 23.039344692406065 26.269364708003263 27.99753084631289 22.693759753277785 24 23.508548277668726 23.719408207923987 28.482508685899987 24.289534828507296 25 22.433404076035124 26.468957313741065 26.844078739282963 24.253559870940848 26 22.279202691924787 26.910234030378316 27.721239952966968 23.089323324729925 27 23.37985933550149 26.980010961497136 27.285516417699036 22.35461328530234 28 20.488422421653866 26.556761964087816 29.805051141581174 23.14976447267714 29 23.66435927956727 25.46471677567803 27.92445419872824 22.94646974602646 30 23.758843843735086 25.994522470666727 26.526340187890685 23.7202934977075 31 23.039666615963704 26.429038792593506 25.52684802230286 25.004446569139926 32 25.298362777266725 27.57017732354364 25.103920948451186 22.02753895073845 33 24.496290233402625 24.5803927628365 25.479686221108366 25.443630782652505 34 22.365800128930385 25.75018249041674 27.247127033450276 24.636890347202606 35 23.729709761768518 25.572319724819742 25.60942141483794 25.088549098573797 36 22.943733395786502 26.62694129965369 27.339438613604006 23.0898866909558 37 24.32760228919842 25.743502576595674 28.273499816101165 21.655395318104738 38 22.92860298857735 26.06631142402081 26.563441877908883 24.441643709492965 39 23.992962751029953 23.53727995518824 27.11296539080313 25.356791902978674 40 23.13624368325619 24.674796846114905 27.94071133838914 24.24824813223976 41 20.043282622324917 26.80898907150003 27.346199008314482 25.801529297860576 42 22.17031204855251 25.92192870841854 28.77924172515615 23.128517517872794 43 23.732928997344935 24.519871133999878 28.581017294538324 23.166182574116863 44 23.05415317605758 23.854455140354645 27.72204476186107 25.3693469217267 45 22.70293457467057 23.444485489698046 26.532295773707055 27.32028416192433 46 23.671683040503616 25.358723444324525 26.654465763832047 24.315127751339805 47 20.74901954156476 25.109393648931093 30.460326543160694 23.681260266343454 48 21.46618474710088 24.043665711358507 28.614899748980104 25.875249792560506 49 22.14632874350821 22.502939564485715 30.615493697943958 24.73523799406212 50 21.582640594077734 23.56931134917358 28.85030635050554 25.997741706243144 51 20.704191686163163 23.373018459901605 26.47781021157621 29.444979642359026 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 341.0 1 850.0 2 1359.0 3 4320.5 4 7282.0 5 5001.5 6 2721.0 7 2671.5 8 2622.0 9 2586.0 10 2550.0 11 2626.5 12 2703.0 13 2563.0 14 2423.0 15 2439.0 16 2455.0 17 2436.0 18 2417.0 19 2465.5 20 2514.0 21 2882.5 22 3251.0 23 3558.5 24 3866.0 25 4999.5 26 7339.5 27 8546.0 28 9038.0 29 9530.0 30 12821.0 31 16112.0 32 17007.0 33 17902.0 34 22853.5 35 27805.0 36 30545.0 37 33285.0 38 35617.5 39 37950.0 40 42901.5 41 47853.0 42 55261.5 43 62670.0 44 69903.0 45 77136.0 46 98684.5 47 120233.0 48 121288.5 49 122344.0 50 122853.5 51 123363.0 52 107792.0 53 92221.0 54 82646.0 55 73071.0 56 69689.0 57 66307.0 58 63784.5 59 61262.0 60 59267.5 61 57273.0 62 52267.5 63 47262.0 64 39727.0 65 32192.0 66 26803.0 67 21414.0 68 18340.0 69 15266.0 70 13138.0 71 11010.0 72 9227.5 73 7445.0 74 6136.5 75 3682.5 76 2537.0 77 2018.0 78 1499.0 79 1247.0 80 995.0 81 645.5 82 296.0 83 246.5 84 197.0 85 118.5 86 40.0 87 30.0 88 20.0 89 18.5 90 17.0 91 13.5 92 10.0 93 6.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1242531.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.034373349174146 #Duplication Level Percentage of deduplicated Percentage of total 1 71.30142214749785 16.423835780725394 2 11.552521880585399 5.32210204243815 3 4.6487741680847146 3.2124479941097928 4 2.4125914668596513 2.222901303467076 5 1.474566189697008 1.6982854070775013 6 0.9434773397778012 1.30394455745565 7 0.6545895238550243 1.0554641638054334 8 0.49499691339494595 0.9121554967862403 9 0.36055831385604253 0.7474711333957914 >10 3.970363279177454 22.708444225677503 >50 1.8549698508739803 30.618880768651756 >100 0.3234016380891181 9.828755836381136 >500 0.003883644125523496 0.698986880584499 >1k 0.002824468454926179 1.7139207106827596 >5k 0.001059175670597317 1.5324036987613399 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCAGTGCCATTCGTATGC 6989 0.5624809360893209 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGTGCCATTCGTATGCCG 6271 0.50469565749265 No Hit GAATCTGTCTCTTATACACATCTGACGCAGTGCCATTCGTATGCCGTCTTC 5583 0.4493248055782914 No Hit GCTGTCTCTTATACACATCTGACGCAGTGCCATTCGTATGCCGTCTTCTGC 4757 0.38284759092529685 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3826 0.30791988288420974 No Hit CCTGTCTCTTATACACATCTGACGCAGTGCCATTCGTATGCCGTCTTCTGC 3289 0.26470164527082224 No Hit TATGAAAACTATGCCCTCGTGTACTCCTGCACCACCTTCTTCTGGCTCTTC 2594 0.20876742713059068 No Hit CTGTCTCTTATACACATCTGACGCAGTGCCATTCGTATGCCGTCTTCTGCT 2335 0.18792287677329578 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAGTGCCATT 1495 0.12031892966855556 No Hit TCTGTCTCTTATACACATCTGACGCAGTGCCATTCGTATGCCGTCTTCTGC 1464 0.11782402209683299 No Hit GAATGACTGTCTCTTATACACATCTGACGCAGTGCCATTCGTATGCCGTCT 1315 0.10583236957468264 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.609617788208101E-4 0.0 0.0 0.1987877968437005 0.0 2 1.609617788208101E-4 0.0 0.0 1.0962301946591273 0.0 3 1.609617788208101E-4 0.0 0.0 1.5293783414659272 0.0 4 1.609617788208101E-4 0.0 0.0 2.0694855902991556 0.0 5 1.609617788208101E-4 0.0 0.0 3.7909718147877194 0.0 6 1.609617788208101E-4 0.0 0.0 4.506929806982683 0.0 7 1.609617788208101E-4 0.0 0.0 5.294032905416445 0.0 8 1.609617788208101E-4 0.0 0.0 6.412395344663433 0.0 9 1.609617788208101E-4 0.0 0.0 6.785826671527713 0.0 10 1.609617788208101E-4 0.0 0.0 8.161888918666818 0.0 11 1.609617788208101E-4 0.0 0.0 9.508092755834664 0.0 12 1.609617788208101E-4 0.0 0.0 11.10491408262651 0.0 13 1.609617788208101E-4 0.0 0.0 11.543373968134397 0.0 14 1.609617788208101E-4 0.0 0.0 11.732101653801797 0.0 15 1.609617788208101E-4 0.0 0.0 12.149475546284156 0.0 16 1.609617788208101E-4 0.0 0.0 12.905915425852553 0.0 17 1.609617788208101E-4 0.0 0.0 13.695513431858037 0.0 18 1.609617788208101E-4 0.0 0.0 14.55416404097765 0.0 19 1.609617788208101E-4 0.0 0.0 15.214831662147665 8.048088941040505E-5 20 1.609617788208101E-4 0.0 0.0 15.767976815065378 8.048088941040505E-5 21 1.609617788208101E-4 0.0 0.0 16.429127321571855 8.048088941040505E-5 22 1.609617788208101E-4 0.0 0.0 17.12754047987535 8.048088941040505E-5 23 1.609617788208101E-4 0.0 0.0 17.838347695148048 8.048088941040505E-5 24 1.609617788208101E-4 0.0 0.0 18.396402182319797 8.048088941040505E-5 25 1.609617788208101E-4 0.0 0.0 18.880172808565742 8.048088941040505E-5 26 1.609617788208101E-4 0.0 0.0 19.334165505729835 8.048088941040505E-5 27 1.609617788208101E-4 0.0 0.0 19.792101766475042 8.048088941040505E-5 28 2.4144266823121515E-4 0.0 0.0 20.245531097413263 8.048088941040505E-5 29 2.4144266823121515E-4 0.0 0.0 20.716424781353545 8.048088941040505E-5 30 2.4144266823121515E-4 0.0 0.0 21.211221289448712 8.048088941040505E-5 31 2.4144266823121515E-4 0.0 0.0 21.711651459802614 8.048088941040505E-5 32 2.4144266823121515E-4 0.0 0.0 22.19228333136155 8.048088941040505E-5 33 2.4144266823121515E-4 0.0 0.0 22.66309653441242 8.048088941040505E-5 34 2.4144266823121515E-4 0.0 0.0 23.139140995274968 8.048088941040505E-5 35 2.4144266823121515E-4 0.0 0.0 23.601664666716566 8.048088941040505E-5 36 2.4144266823121515E-4 0.0 0.0 24.090183665437724 8.048088941040505E-5 37 4.0240444705202526E-4 0.0 0.0 24.576690641923623 8.048088941040505E-5 38 4.0240444705202526E-4 0.0 0.0 25.014426199426815 8.048088941040505E-5 39 4.0240444705202526E-4 0.0 0.0 25.476869389979 8.048088941040505E-5 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTATACG 25 3.8909882E-5 45.000004 1 AAGCGTA 20 7.0335076E-4 45.0 37 TAACCCG 20 7.0335076E-4 45.0 1 AACGCGA 20 7.0335076E-4 45.0 12 GCGTGAC 20 7.0335076E-4 45.0 45 TAAGCGT 20 7.0335076E-4 45.0 17 TATCGCG 45 3.8562575E-10 45.0 1 CGTACTA 30 2.1656451E-6 44.999996 33 CGGTATT 30 2.1656451E-6 44.999996 43 CTAACGG 100 0.0 42.750004 2 GCTAACG 95 0.0 42.63158 1 CGTTTTT 2215 0.0 41.139957 1 CGCATCG 45 1.9284926E-8 40.0 21 ATGCGCG 45 1.9284926E-8 40.0 1 TGAACGG 130 0.0 39.80769 2 CCCTCGT 340 0.0 39.705883 14 GTATGCG 80 0.0 39.375 1 GCCCTCG 350 0.0 39.214287 13 ACCGGTA 35 6.2486997E-6 38.571426 41 GTTTACG 35 6.2486997E-6 38.571426 1 >>END_MODULE