##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934836.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1868421 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.10744527063226 33.0 31.0 34.0 30.0 34.0 2 32.2807311628375 34.0 31.0 34.0 30.0 34.0 3 32.295759360443924 34.0 31.0 34.0 30.0 34.0 4 35.882240137527894 37.0 35.0 37.0 35.0 37.0 5 35.751117654961064 37.0 35.0 37.0 35.0 37.0 6 35.66375351165503 37.0 35.0 37.0 33.0 37.0 7 35.98006819662164 37.0 35.0 37.0 35.0 37.0 8 35.716264696232805 37.0 35.0 37.0 35.0 37.0 9 37.48509195732653 39.0 37.0 39.0 35.0 39.0 10 37.194847413939364 39.0 37.0 39.0 34.0 39.0 11 37.09051172085948 39.0 37.0 39.0 34.0 39.0 12 37.03189484596887 39.0 37.0 39.0 33.0 39.0 13 36.98767943627266 39.0 37.0 39.0 33.0 39.0 14 38.12128797524755 40.0 37.0 41.0 33.0 41.0 15 38.12231076400875 40.0 37.0 41.0 33.0 41.0 16 38.26435530322128 40.0 37.0 41.0 34.0 41.0 17 38.19513963929971 40.0 37.0 41.0 34.0 41.0 18 38.19342696319512 40.0 37.0 41.0 34.0 41.0 19 38.15432817336136 40.0 37.0 41.0 34.0 41.0 20 38.0316652403286 40.0 37.0 41.0 34.0 41.0 21 38.03377076151467 40.0 37.0 41.0 34.0 41.0 22 37.981759464274916 40.0 37.0 41.0 33.0 41.0 23 37.748086753467234 40.0 36.0 41.0 33.0 41.0 24 37.487497732042186 39.0 36.0 41.0 32.0 41.0 25 37.432836603741876 39.0 36.0 41.0 32.0 41.0 26 37.56352610038102 39.0 36.0 41.0 33.0 41.0 27 37.582261171331304 39.0 36.0 41.0 33.0 41.0 28 37.48704387287447 39.0 36.0 41.0 33.0 41.0 29 37.463358632770664 39.0 36.0 41.0 33.0 41.0 30 37.31848068502762 39.0 36.0 41.0 32.0 41.0 31 37.15400222969021 39.0 35.0 41.0 32.0 41.0 32 37.03409831081967 39.0 35.0 41.0 31.0 41.0 33 36.92713365991926 39.0 35.0 41.0 31.0 41.0 34 36.7885701348893 39.0 35.0 41.0 31.0 41.0 35 36.745454584379004 39.0 35.0 41.0 31.0 41.0 36 36.67734841344643 39.0 35.0 41.0 30.0 41.0 37 36.57463869224334 39.0 35.0 41.0 30.0 41.0 38 36.55436274801022 39.0 35.0 41.0 30.0 41.0 39 36.6509908634082 39.0 35.0 41.0 31.0 41.0 40 36.63782038416395 39.0 35.0 41.0 31.0 41.0 41 36.571400128771835 39.0 35.0 41.0 30.0 41.0 42 36.45183392822067 39.0 35.0 41.0 30.0 41.0 43 36.38576851790897 39.0 35.0 41.0 30.0 41.0 44 36.36135860172841 39.0 35.0 41.0 30.0 41.0 45 36.34377744630359 39.0 35.0 41.0 30.0 41.0 46 36.25145885215377 39.0 35.0 40.0 30.0 41.0 47 36.05767864951208 39.0 35.0 40.0 30.0 41.0 48 36.043505719535375 39.0 35.0 40.0 29.0 41.0 49 36.073326086572564 39.0 35.0 40.0 29.0 41.0 50 35.98690980244816 39.0 35.0 40.0 29.0 41.0 51 35.09810690417203 38.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 4.0 8 4.0 9 28.0 10 33.0 11 34.0 12 21.0 13 24.0 14 33.0 15 56.0 16 97.0 17 204.0 18 386.0 19 800.0 20 1460.0 21 2746.0 22 4757.0 23 6933.0 24 9849.0 25 13263.0 26 16097.0 27 18125.0 28 19725.0 29 22691.0 30 28499.0 31 36822.0 32 48409.0 33 66267.0 34 110525.0 35 145380.0 36 152919.0 37 238029.0 38 417992.0 39 505895.0 40 314.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.177130850060024 20.452510435281983 23.170580934382563 11.19977778027543 2 31.024324817586614 27.540741620865962 24.33926829124699 17.09566527030043 3 29.03489095872932 28.07857543883311 26.26340637361708 16.623127228820486 4 26.852299347952098 23.6486851732024 31.0852853826841 18.413730096161412 5 27.35229372823363 28.440699392695755 25.003840140953244 19.20316673811737 6 24.158688004470086 36.022716507682155 25.50752747908528 14.31106800876248 7 76.49154018286029 5.484898746053486 12.903355293052263 5.120205778033966 8 76.15981622985399 7.5433213392484895 10.189941132111018 6.106921298786515 9 71.49769778866755 5.80067340283587 11.752865119799019 10.948763688697568 10 40.907482842464304 21.022671014723127 21.37189637667314 16.69794976613943 11 29.5561867480616 24.552442945139237 24.33819786868163 21.55317243811753 12 25.016471127224538 21.457637224158795 30.576406495110042 22.949485153506625 13 24.165217582118807 23.605011932535547 33.210395301701276 19.01937518364437 14 20.454490717027905 28.28570220523105 29.498865619686356 21.76094145805469 15 18.49797235205556 26.18055566705791 35.43195029385775 19.88952168702878 16 20.52107100059355 25.175321835924557 30.244950147745076 24.058657015736816 17 20.19625127313384 26.686597934833745 29.301105050735355 23.816045741297064 18 21.165518906070954 25.74949649998582 30.513198042625294 22.57178655131793 19 20.882017489634293 28.792921937828787 27.08211907273575 23.24294149980117 20 23.26162037356677 26.725882442982602 30.04601211397217 19.966485069478455 21 21.74028230254316 28.91537827930643 29.499454352097302 19.8448850660531 22 20.133792116444848 24.61961196111583 28.945617716777967 26.30097820566136 23 20.507904803039573 28.269271218852708 28.255141640989905 22.96768233711781 24 22.027369634573795 24.93222887133039 28.736724753147175 24.30367674094864 25 19.400980828196644 30.190090991270168 26.38837820812333 24.020549972409857 26 19.05250476204239 28.327662769793317 29.165161384934123 23.45467108323017 27 21.909837236896823 29.263426176434542 26.756175401582404 22.07056118508623 28 18.006701915681745 29.055550114240848 29.801634642299568 23.136113327777842 29 19.842797742050642 27.853144446567452 28.610628974947293 23.693428836434617 30 20.10216112963834 30.46310226656626 26.68793596304045 22.746800640754948 31 19.785048444649252 30.2364938094787 24.12363166545441 25.854826080417638 32 20.17832169516399 30.232800851628195 26.09449369280264 23.494383760405178 33 19.825831544389622 27.15892189180062 24.33107955862196 28.684167005187806 34 18.63033010226282 28.00450219730992 26.357175390342967 27.00799231008429 35 18.505465310013108 27.406082462143168 25.886135940454537 28.20231628738919 36 18.10475262266909 31.046268480176575 23.335586572833424 27.51339232432091 37 17.578318805023066 29.59595294636487 28.35945431998463 24.466273928627437 38 17.82778078388115 28.130223327611926 25.510845789037912 28.531150099469016 39 20.353282263472742 24.194975329435923 27.643234581499566 27.80850782559177 40 19.69582872382616 23.528637282496824 27.909555715762135 28.865978277914884 41 17.36878358785306 26.640355680010018 24.93667112497665 31.05418960716027 42 18.927318843023066 26.13361763756669 27.547538804156023 27.391524715254217 43 20.266899162447864 26.27480637393821 26.479042999409664 26.979251464204268 44 19.211194907357605 25.99478383083898 27.435037392536266 27.35898386926715 45 19.783068162903326 23.890975320872545 26.564837368023586 29.76111914820054 46 21.625051313381725 26.326400741588753 25.825014811972245 26.22353313305727 47 17.114558228579106 25.556178184681077 30.831488192436286 26.49777539430353 48 18.35994136225187 25.298259867556617 27.47378668940244 28.868012080789075 49 18.80400616349313 22.753704866301547 31.273091021777212 27.16919794842811 50 18.885572362973868 22.408172462202042 29.412107870763606 29.294147304060488 51 18.019493465337845 22.42401471616943 26.133510595310156 33.42298122318257 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 490.0 1 860.0 2 1230.0 3 5819.5 4 10409.0 5 7359.5 6 4310.0 7 4255.5 8 4201.0 9 4214.0 10 4227.0 11 4294.5 12 4362.0 13 4387.5 14 4413.0 15 4453.0 16 4493.0 17 4507.5 18 4522.0 19 4415.5 20 4309.0 21 4941.0 22 5573.0 23 5461.5 24 5350.0 25 6757.0 26 9846.0 27 11528.0 28 13352.0 29 15176.0 30 17900.5 31 20625.0 32 24807.0 33 28989.0 34 34866.0 35 40743.0 36 45403.0 37 50063.0 38 56434.5 39 62806.0 40 71320.5 41 79835.0 42 90794.0 43 101753.0 44 119212.5 45 136672.0 46 188864.0 47 241056.0 48 236941.0 49 232826.0 50 223529.0 51 214232.0 52 177435.0 53 140638.0 54 120675.5 55 100713.0 56 89409.5 57 78106.0 58 71170.0 59 64234.0 60 60526.0 61 56818.0 62 49558.5 63 42299.0 64 35368.0 65 28437.0 66 23044.5 67 17652.0 68 15283.5 69 12915.0 70 10791.5 71 8668.0 72 7625.5 73 6583.0 74 5346.0 75 2995.5 76 1882.0 77 1616.0 78 1350.0 79 1080.5 80 811.0 81 639.0 82 467.0 83 355.5 84 244.0 85 171.0 86 98.0 87 56.0 88 14.0 89 12.5 90 11.0 91 9.5 92 8.0 93 5.0 94 2.0 95 2.5 96 3.0 97 2.0 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1868421.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.07210670964763 #Duplication Level Percentage of deduplicated Percentage of total 1 69.51841047910563 19.51528237254539 2 12.883398442343127 7.233282717127287 3 5.281808377946476 4.44814465216873 4 2.740671129491337 3.077456496125253 5 1.6160758408219604 2.26833267272188 6 1.0709347246336087 1.8038036321389055 7 0.7399680045394363 1.4540722549609255 8 0.571322093583794 1.2830571821330845 9 0.44305879343817034 1.119383435523964 >10 4.021848158698929 24.96664671935182 >50 0.9220969992505278 18.3953493219978 >100 0.17856721051695926 7.1587573416363455 >500 0.007181485054261291 1.3248350730545528 >1k 0.00349369543180279 2.1281270114482713 >5k 3.881883813114211E-4 0.5792986426780179 >10k+ 7.763767626228422E-4 3.2441704743878725 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCAAATCCCCTCGTATGC 17595 0.941704251878993 No Hit GAATCTGTCTCTTATACACATCTGACGCAAATCCCCTCGTATGCCGTCTTC 15575 0.8335915727772274 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAAATCCCCTCGTATGCCG 15495 0.8293098825157713 No Hit GCTGTCTCTTATACACATCTGACGCAAATCCCCTCGTATGCCGTCTTCTGC 10876 0.5820957910449519 TruSeq Adapter, Index 16 (95% over 22bp) CCTGTCTCTTATACACATCTGACGCAAATCCCCTCGTATGCCGTCTTCTGC 5342 0.28590986720872863 TruSeq Adapter, Index 16 (95% over 22bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5290 0.2831267685387822 No Hit CTGTCTCTTATACACATCTGACGCAAATCCCCTCGTATGCCGTCTTCTGCT 4620 0.24726761259908767 TruSeq Adapter, Index 19 (95% over 22bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAAATCCCCT 3886 0.20798310445022827 No Hit GAATGACTGTCTCTTATACACATCTGACGCAAATCCCCTCGTATGCCGTCT 3433 0.18373803334473332 No Hit CGCTGTCTCTTATACACATCTGACGCAAATCCCCTCGTATGCCGTCTTCTG 3061 0.16382817362896263 No Hit TCTGTCTCTTATACACATCTGACGCAAATCCCCTCGTATGCCGTCTTCTGC 2908 0.15563944100392793 TruSeq Adapter, Index 16 (95% over 22bp) GAACTGTCTCTTATACACATCTGACGCAAATCCCCTCGTATGCCGTCTTCT 2687 0.14381127165665553 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAAATCCCCTCGTATGCCGTC 2481 0.13278591923340616 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAAATCCCCTCGTA 2405 0.1287183134850229 No Hit ACTGTCTCTTATACACATCTGACGCAAATCCCCTCGTATGCCGTCTTCTGC 2079 0.11127042566958945 TruSeq Adapter, Index 19 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.605633848046024E-4 0.0 0.0 0.26396620461876635 0.0 2 1.605633848046024E-4 0.0 0.0 1.485211309442572 0.0 3 1.605633848046024E-4 0.0 0.0 2.153476116999327 0.0 4 1.605633848046024E-4 0.0 0.0 2.994025436451421 0.0 5 1.605633848046024E-4 0.0 0.0 5.795374811137319 0.0 6 1.605633848046024E-4 0.0 0.0 6.977067802170924 0.0 7 1.605633848046024E-4 0.0 0.0 8.266177697638808 0.0 8 1.605633848046024E-4 0.0 0.0 10.057850987545098 0.0 9 1.605633848046024E-4 0.0 0.0 10.642248187105583 0.0 10 1.605633848046024E-4 0.0 0.0 12.979141210680034 0.0 11 1.605633848046024E-4 0.0 0.0 15.032211691048216 0.0 12 1.605633848046024E-4 0.0 0.0 17.581851199488767 0.0 13 1.605633848046024E-4 0.0 0.0 18.26943713435034 0.0 14 1.605633848046024E-4 0.0 0.0 18.56283995951662 0.0 15 1.605633848046024E-4 0.0 0.0 19.170732934386844 0.0 16 1.605633848046024E-4 0.0 0.0 20.209524512944352 0.0 17 1.605633848046024E-4 0.0 0.0 21.506662577652467 0.0 18 1.605633848046024E-4 0.0 0.0 22.78571050100593 0.0 19 1.605633848046024E-4 0.0 0.0 23.859130249552965 0.0 20 2.1408451307280318E-4 0.0 0.0 24.656113370594742 0.0 21 2.1408451307280318E-4 0.0 0.0 25.61847677798526 0.0 22 2.1408451307280318E-4 0.0 0.0 26.68905990673408 0.0 23 2.1408451307280318E-4 0.0 0.0 27.84597261537951 0.0 24 2.1408451307280318E-4 0.0 0.0 28.663026159521863 0.0 25 2.1408451307280318E-4 0.0 0.0 29.429555758579035 0.0 26 2.1408451307280318E-4 0.0 0.0 30.090220565921705 0.0 27 2.1408451307280318E-4 0.0 0.0 30.790812134952454 0.0 28 2.67605641341004E-4 0.0 0.0 31.48139525299705 0.0 29 2.67605641341004E-4 0.0 0.0 32.19563470973619 0.0 30 2.67605641341004E-4 0.0 0.0 32.97479529506466 0.0 31 2.67605641341004E-4 0.0 0.0 33.70621503397789 0.0 32 2.67605641341004E-4 0.0 0.0 34.4299277304205 0.0 33 2.67605641341004E-4 0.0 0.0 35.10049394649279 0.0 34 2.67605641341004E-4 0.0 0.0 35.743978471661364 0.0 35 2.67605641341004E-4 0.0 0.0 36.383502433338094 0.0 36 2.67605641341004E-4 0.0 0.0 37.0346940009773 0.0 37 2.67605641341004E-4 0.0 0.0 37.71580387931842 0.0 38 2.67605641341004E-4 0.0 0.0 38.36694192582935 0.0 39 2.67605641341004E-4 0.0 0.0 39.03006870507236 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCCTTA 30 2.1662345E-6 45.000004 23 CGCTAAC 30 2.1662345E-6 45.000004 39 TAGCGAA 20 7.034422E-4 45.0 1 TGCGCAC 25 3.8917464E-5 45.0 13 CGAATCG 25 3.8917464E-5 45.0 21 CGTCGGA 20 7.034422E-4 45.0 23 AGTCGAG 40 6.8193913E-9 45.0 1 GCTAACG 115 0.0 43.04348 1 CGTTTTT 4265 0.0 41.887455 1 TACGGCT 2100 0.0 41.142853 7 GCGTAAG 100 0.0 40.5 1 CGTCATA 140 0.0 40.17857 38 ACGTTAG 40 3.4597724E-7 39.375 1 TCGAGTA 40 3.4597724E-7 39.375 26 TACGAAT 145 0.0 38.793102 12 GTCGACG 35 6.2503896E-6 38.571426 1 TAACGCG 70 0.0 38.571426 1 ACGGCTG 2240 0.0 38.571426 8 GCGATCG 35 6.2503896E-6 38.571426 9 TATCGAG 35 6.2503896E-6 38.571426 1 >>END_MODULE