SRR2934834.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934834.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1615342
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7063	0.437244868269382	No Hit
GCTGTCTCTTATACACATCTGACGCGCCATCAATCGTATGCCGTCTTCTGC	5831	0.3609761895623341	No Hit
CCTGTCTCTTATACACATCTGACGCGCCATCAATCGTATGCCGTCTTCTGC	5563	0.3443852756877491	No Hit
CGCTGTCTCTTATACACATCTGACGCGCCATCAATCGTATGCCGTCTTCTG	4158	0.2574067906362863	No Hit
CTGTCTCTTATACACATCTGACGCGCCATCAATCGTATGCCGTCTTCTGCT	3954	0.24477788604518425	No Hit
TCTGTCTCTTATACACATCTGACGCGCCATCAATCGTATGCCGTCTTCTGC	2358	0.14597527953832687	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCGCCATCAATCGTATGCCGTCT	1790	0.11081244714741523	No Hit
CGTTCTGTCTCTTATACACATCTGACGCGCCATCAATCGTATGCCGTCTTC	1703	0.1054265907776805	No Hit
ACTGTCTCTTATACACATCTGACGCGCCATCAATCGTATGCCGTCTTCTGC	1678	0.10387893090131996	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCGCCATCAATCGTATGCCGTCTT	1647	0.10195983265463289	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGAACGG	80	0.0	45.000004	2
ATTAGCG	70	0.0	45.000004	1
TCGATAT	20	7.034136E-4	45.000004	31
CGTAGCA	40	6.8175723E-9	45.000004	25
TAGTCCG	20	7.034136E-4	45.000004	1
GGTACGC	25	3.8915103E-5	45.0	8
GCGAACG	45	3.8562575E-10	45.0	1
GACGTAG	45	3.8562575E-10	45.0	1
GCGATCC	25	3.8915103E-5	45.0	9
TCGCGTA	45	3.8562575E-10	45.0	30
TCGCGCG	25	3.8915103E-5	45.0	1
ACGACCG	25	3.8915103E-5	45.0	16
CGTTTTT	5790	0.0	43.367874	1
TTGCTCG	205	0.0	42.80488	1
CGAAAGG	325	0.0	42.230766	2
ACGCGAG	65	0.0	41.53846	1
TGTTACG	115	0.0	41.086956	1
GCGTATG	55	6.184564E-11	40.909092	1
CGCGTAA	50	1.0822987E-9	40.5	31
ATGTCGA	95	0.0	40.263157	12