SRR2934833.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934833.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	730504
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCTGTCTCTTATACACATCTGACGCCTCGTTTGTCGTATGCCGTCTTCTGC	3796	0.5196412339973497	TruSeq Adapter, Index 20 (95% over 21bp)
GCTGTCTCTTATACACATCTGACGCCTCGTTTGTCGTATGCCGTCTTCTGC	3554	0.4865134208710698	TruSeq Adapter, Index 20 (95% over 21bp)
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2981	0.40807442532826654	No Hit
CTGTCTCTTATACACATCTGACGCCTCGTTTGTCGTATGCCGTCTTCTGCT	2513	0.3440090677121549	TruSeq Adapter, Index 27 (95% over 23bp)
TCTGTCTCTTATACACATCTGACGCCTCGTTTGTCGTATGCCGTCTTCTGC	1377	0.18849999452432842	TruSeq Adapter, Index 20 (95% over 21bp)
ACTGTCTCTTATACACATCTGACGCCTCGTTTGTCGTATGCCGTCTTCTGC	1162	0.1590682597220549	TruSeq Adapter, Index 27 (95% over 22bp)
CGCTGTCTCTTATACACATCTGACGCCTCGTTTGTCGTATGCCGTCTTCTG	987	0.13511219651090206	TruSeq Adapter, Index 27 (95% over 21bp)

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCCGCGG	30	2.16441E-6	45.000004	2
ACGCCCA	30	2.16441E-6	45.000004	22
CGTTGGC	35	1.2111195E-7	45.000004	21
TAAACGG	30	2.16441E-6	45.000004	2
ACGATGT	30	2.16441E-6	45.000004	29
GTCACGA	30	2.16441E-6	45.000004	42
GACGGTC	60	0.0	45.000004	29
GCTCGAT	35	1.2111195E-7	45.000004	19
CGATATA	30	2.16441E-6	45.000004	9
TAATCCG	30	2.16441E-6	45.000004	4
AACGTAA	25	3.8894046E-5	45.0	10
CTAGACA	40	6.8084773E-9	45.0	21
CCTTATC	20	7.031597E-4	45.0	42
CGGAAAC	20	7.031597E-4	45.0	16
AAATCCG	20	7.031597E-4	45.0	45
CTCCGTT	40	6.8084773E-9	45.0	22
ATTAGCG	50	2.1827873E-11	45.0	1
GATCGGA	20	7.031597E-4	45.0	9
CGAAATA	25	3.8894046E-5	45.0	23
GTACAAG	110	0.0	45.0	1