SRR2934831.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934831.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1541606
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3963	0.2570695754946465	No Hit
CCTGTCTCTTATACACATCTGACGCACCGATCATCGTATGCCGTCTTCTGC	3948	0.2560965642323655	No Hit
GCTGTCTCTTATACACATCTGACGCACCGATCATCGTATGCCGTCTTCTGC	3314	0.21497062154662086	No Hit
CTGTCTCTTATACACATCTGACGCACCGATCATCGTATGCCGTCTTCTGCT	1747	0.11332337834699657	No Hit
TCTGTCTCTTATACACATCTGACGCACCGATCATCGTATGCCGTCTTCTGC	1725	0.11189629516231775	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AACGTTA	20	7.034036E-4	45.000004	20
AACGCGT	20	7.034036E-4	45.000004	30
CGCAATA	35	1.2122837E-7	45.000004	38
GCGTACC	20	7.034036E-4	45.000004	39
GTCGGTA	20	7.034036E-4	45.000004	1
CGTATAG	25	3.891428E-5	45.0	11
CCTAGCG	25	3.891428E-5	45.0	1
AATTGCG	105	0.0	45.0	1
ACGTTCA	30	2.1659853E-6	44.999996	10
ATCGTAG	30	2.1659853E-6	44.999996	1
CGTTGAT	90	0.0	42.500004	25
TCTAGCG	60	3.6379788E-12	41.249996	1
TACGAAT	115	0.0	41.08696	12
GCGTAAC	50	1.0822987E-9	40.5	32
CGTATGG	140	0.0	40.178574	2
CGTTTTT	2200	0.0	40.090908	1
CGACGGT	90	0.0	40.000004	28
CATAGCG	45	1.9290383E-8	40.000004	1
TTACGCG	45	1.9290383E-8	40.000004	1
TTAAGCG	130	0.0	39.80769	1